Cow genome map
| Conread name: | Ss1.1-Mixn-0006b24.5 |
| Conread position: | 293-867 |
| Cow position: | chrX:25325023-25324455 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 348 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 20, 13 |
| Conread position: | 324-899 |
| Cow position: | chrX:25309723-25310298 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 351 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 220, 195 |
| Conread position: | 330-612 |
| Cow position: | chrX:29045736-29045455 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 136, 112 |
| Conread position: | 331-769 |
| Cow position: | chrX:25310150-25310587 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 275 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 34, 46 |
| Conread position: | 331-833 |
| Cow position: | chrX:25324739-25324237 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 317 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 129, 124 |
| Conread position: | 331-838 |
| Cow position: | chrX:29045168-29044661 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 11 |
| Conread position: | 331-858 |
| Cow position: | chrX:25325495-25324968 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 336 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 212, 201 |
| Conread position: | 331-865 |
| Cow position: | chrX:25309898-25310432 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 335 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 45, 27 |
| Conread position: | 331-866 |
| Cow position: | chrX:25309814-25310349 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 333 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 34, 46 |
| Conread position: | 331-866 |
| Cow position: | chrX:25309982-25310517 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 327 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 203, 213 |
| Conread position: | 331-866 |
| Cow position: | chrX:25325243-25324708 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 332 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 226, 236 |
| Conread position: | 331-874 |
| Cow position: | chrX:25324823-25324280 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 343 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 135, 119 |
| Conread position: | 331-899 |
| Cow position: | chrX:25325327-25324759 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 350 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 47, 43 |
| Conread position: | 332-529 |
| Cow position: | chrX:29045650-29045454 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 129, 118 |
| Conread position: | 332-838 |
| Cow position: | chrX:25325410-25324904 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 305 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 226, 187 |
| Conread position: | 332-866 |
| Cow position: | chrX:29045251-29044717 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 335 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 280, 275 |
| Conread position: | 332-872 |
| Cow position: | chrX:25325158-25324618 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 348 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 53, 49 |
| Conread position: | 334-899 |
| Cow position: | chrX:29045333-29044768 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 118 |
| Conread position: | 337-769 |
| Cow position: | chrX:13826934-13826502 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 259 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 293, 277 |
| Conread position: | 384-899 |
| Cow position: | chrX:25325610-25325095 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 316 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 82, 57 |
| Conread position: | 460-755 |
| Cow position: | chrX:29045774-29045479 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 462-860 |
| Cow position: | chrX:25309693-25310091 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 81, 64 |
Show alignments to all cow chromosomes.