Cow genome map
| Conread name: | Ss1.1-Mixn-0008o03.5 |
| Conread position: | 75-413 |
| Cow position: | chr11:22709546-22709885 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 19, 13 |
| Conread position: | 77-449 |
| Cow position: | chr11:80132474-80132096 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 260 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 20, 41 |
| Conread position: | 80-346 |
| Cow position: | chr11:50023706-50023430 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 18, 27 |
| Conread position: | 120-347 |
| Cow position: | chr11:1465235-1465464 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 76 |
| Conread position: | 126-383 |
| Cow position: | chr11:17150849-17150596 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 70, 87 |
| Conread position: | 127-320 |
| Cow position: | chr11:81643490-81643681 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 70, 89 |
| Conread position: | 128-431 |
| Cow position: | chr11:20068998-20068687 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 129-558 |
| Cow position: | chr11:13893717-13893286 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 300 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 65, 75 |
| Conread position: | 130-398 |
| Cow position: | chr11:11858456-11858727 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 67, 147 |
| Conread position: | 130-398 |
| Cow position: | chr11:25165840-25165560 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 68, 26 |
| Conread position: | 130-399 |
| Cow position: | chr11:9230826-9231094 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 190, 66 |
| Conread position: | 130-413 |
| Cow position: | chr11:23418802-23419079 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 67, 97 |
| Conread position: | 130-424 |
| Cow position: | chr11:45714902-45715194 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 15, 19 |
| Conread position: | 131-413 |
| Cow position: | chr11:49801053-49801327 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 66, 141 |
| Conread position: | 136-473 |
| Cow position: | chr11:59003890-59003550 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 61, 174 |
| Conread position: | 137-379 |
| Cow position: | chr11:57004594-57004838 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 60, 54 |
| Conread position: | 145-449 |
| Cow position: | chr11:67171410-67171102 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 53, 6 |
| Conread position: | 181-431 |
| Cow position: | chr11:20803790-20803539 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 16, 138 |
| Conread position: | 200-431 |
| Cow position: | chr11:59415228-59415463 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 127, 66 |
Show alignments to all cow chromosomes.