Cow genome map


           Conread name:
           Ss1.1-Mixn-0008o03.5
        

               Conread position:
               80-446
               

               Cow position:
               chr14:23019351-23019702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               117, 8
               

               Conread position:
               119-446
               

               Cow position:
               chr14:31913936-31914261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               78, 52
               

               Conread position:
               126-341
               

               Cow position:
               chr14:11732838-11733054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               70, 57
               

               Conread position:
               130-353
               

               Cow position:
               chr14:18130458-18130686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               130-415
               

               Cow position:
               chr14:41960685-41960402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               137, 144
               

               Conread position:
               130-429
               

               Cow position:
               chr14:24146541-24146241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               68, 158
               

               Conread position:
               131-345
               

               Cow position:
               chr14:31225429-31225642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               66, 46
               

               Conread position:
               136-415
               

               Cow position:
               chr14:4346757-4347039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               62, 17
               

               Conread position:
               138-440
               

               Cow position:
               chr14:41719888-41720201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               59, 172
               

               Conread position:
               154-449
               

               Cow position:
               chr14:20707667-20707950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               113, 44
               

               Conread position:
               170-605
               

               Cow position:
               chr14:28385091-28384641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 149
               

               Conread position:
               180-411
               

               Cow position:
               chr14:12161397-12161630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 103
               
Show alignments to all cow chromosomes.