Cow genome map
| Conread name: | Ss1.1-Mixn-0008o03.5 |
| Conread position: | 125-319 |
| Cow position: | chrX:17609673-17609481 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 72, 9 |
| Conread position: | 127-347 |
| Cow position: | chrX:27240555-27240777 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 72, 188 |
| Conread position: | 127-399 |
| Cow position: | chrX:27210623-27210891 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 70, 95 |
| Conread position: | 127-413 |
| Cow position: | chrX:7809185-7808898 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 70, 139 |
| Conread position: | 127-431 |
| Cow position: | chrX:12641104-12641411 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 130-286 |
| Cow position: | chrX:21217774-21217615 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 130-302 |
| Cow position: | chrX:6514467-6514291 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 130-382 |
| Cow position: | chrX:9346961-9347209 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 70, 21 |
| Conread position: | 130-431 |
| Cow position: | chrX:9403937-9404244 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 68, 92 |
| Conread position: | 130-433 |
| Cow position: | chrX:26845337-26845647 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 66, 181 |
| Conread position: | 130-436 |
| Cow position: | chrX:12852690-12852377 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 131-407 |
| Cow position: | chrX:20544082-20543800 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 66, 29 |
| Conread position: | 131-449 |
| Cow position: | chrX:3121039-3120721 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 66, 14 |
| Conread position: | 132-587 |
| Cow position: | chrX:15341216-15340759 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 329 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 17, 13 |
| Conread position: | 135-440 |
| Cow position: | chrX:20974856-20975154 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 64, 102 |
| Conread position: | 137-446 |
| Cow position: | chrX:37128675-37128986 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 64, 215 |
| Conread position: | 138-395 |
| Cow position: | chrX:37038174-37038428 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 140 |
| Conread position: | 145-442 |
| Cow position: | chrX:30529923-30529618 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 52, 6 |
| Conread position: | 148-442 |
| Cow position: | chrX:28080846-28081146 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 49, 140 |
| Conread position: | 148-455 |
| Cow position: | chrX:34489444-34489753 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 119, 50 |
| Conread position: | 153-445 |
| Cow position: | chrX:35821538-35821252 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 116, 33 |
| Conread position: | 177-440 |
| Cow position: | chrX:33884879-33885149 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 21, 74 |
Show alignments to all cow chromosomes.