Cow genome map
| Conread name: | Ss1.1-Mixn-0022f16.5 |
| Conread position: | 175-447 |
| Cow position: | chr13:31114881-31115154 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 125 |
| Conread position: | 177-401 |
| Cow position: | chr13:31114835-31115058 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 21 |
| Conread position: | 177-428 |
| Cow position: | chr13:61775678-61775434 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 21, 7 |
| Conread position: | 177-440 |
| Cow position: | chr13:61774218-61773953 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 7, 26 |
| Conread position: | 177-441 |
| Cow position: | chr13:61774324-61774068 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 177-441 |
| Cow position: | chr13:61776232-61775972 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 7, 21 |
| Conread position: | 177-448 |
| Cow position: | chr13:61774256-61773984 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 21, 7 |
| Conread position: | 177-453 |
| Cow position: | chr13:61773804-61773522 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 7, 219 |
| Conread position: | 177-453 |
| Cow position: | chr13:61774074-61773796 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 7, 107 |
| Conread position: | 177-453 |
| Cow position: | chr13:61774302-61774032 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 21, 7 |
| Conread position: | 177-453 |
| Cow position: | chr13:61774468-61774194 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 177, 7 |
| Conread position: | 177-453 |
| Cow position: | chr13:61774506-61774230 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 7, 42 |
| Conread position: | 177-453 |
| Cow position: | chr13:61775832-61775556 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 7, 21 |
| Conread position: | 177-453 |
| Cow position: | chr13:61775942-61775658 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 7, 21 |
| Conread position: | 177-453 |
| Cow position: | chr13:61776104-61775814 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 7, 26 |
| Conread position: | 177-453 |
| Cow position: | chr13:61776206-61775938 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 21, 7 |
| Conread position: | 177-453 |
| Cow position: | chr13:61776356-61776086 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 7, 63 |
| Conread position: | 183-433 |
| Cow position: | chr13:31114588-31114840 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 14 |
| Conread position: | 183-441 |
| Cow position: | chr13:61775775-61775510 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 56, 19 |
| Conread position: | 183-448 |
| Cow position: | chr13:31114612-31114879 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 9, 51 |
| Conread position: | 183-453 |
| Cow position: | chr13:61773741-61773472 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 56, 19 |
| Conread position: | 183-453 |
| Cow position: | chr13:61774159-61773890 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 127, 14 |
| Conread position: | 198-441 |
| Cow position: | chr13:61774577-61774334 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 48, 40 |
| Conread position: | 198-453 |
| Cow position: | chr13:61776457-61776206 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 48, 40 |
| Conread position: | 201-453 |
| Cow position: | chr13:61773892-61773640 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 187, 146 |
| Conread position: | 201-453 |
| Cow position: | chr13:61774432-61774178 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 142, 221 |
| Conread position: | 202-440 |
| Cow position: | chr13:31114742-31114976 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 152, 41 |
| Conread position: | 202-441 |
| Cow position: | chr13:61773913-61773672 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 92, 36 |
| Conread position: | 202-441 |
| Cow position: | chr13:61774557-61774322 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 141, 41 |
| Conread position: | 202-441 |
| Cow position: | chr13:61776031-61775788 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 44, 36 |
Show alignments to all cow chromosomes.