Cow genome map

Conread name: Ss1.1-Ova1-OVRM10012F06.5

Conread position: 92-229
Cow position:
Alignm length: 139
Alignm identity: 117
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 121, 25

Conread position: 92-274
Cow position:
Alignm length: 184
Alignm identity: 141
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 124, 25

Conread position: 95-250
Cow position:
Alignm length: 157
Alignm identity: 129
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 121, 22

Conread position: 95-261
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 121, 22

Conread position: 95-264
Cow position:
Alignm length: 171
Alignm identity: 135
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 121, 22

Conread position: 95-269
Cow position:
Alignm length: 183
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 22

Conread position: 95-271
Cow position:
Alignm length: 178
Alignm identity: 149
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 121, 21

Conread position: 95-280
Cow position:
Alignm length: 187
Alignm identity: 150
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 119, 22

Conread position: 95-280
Cow position:
Alignm length: 187
Alignm identity: 148
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 121, 22

Conread position: 95-280
Cow position:
Alignm length: 187
Alignm identity: 146
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 121, 22

Conread position: 95-281
Cow position:
Alignm length: 189
Alignm identity: 157
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 121, 22

Conread position: 95-288
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 95-292
Cow position:
Alignm length: 199
Alignm identity: 159
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 121, 22

Conread position: 95-292
Cow position:
Alignm length: 203
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position:
Alignm length: 202
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position:
Alignm length: 202
Alignm identity: 160
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position:
Alignm length: 201
Alignm identity: 152
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 108, 14

Conread position: 95-293
Cow position:
Alignm length: 202
Alignm identity: 162
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position:
Alignm length: 200
Alignm identity: 156
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position:
Alignm length: 200
Alignm identity: 150
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position:
Alignm length: 202
Alignm identity: 155
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position:
Alignm length: 202
Alignm identity: 156
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 121, 19

Conread position: 95-293
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 116, 22

Conread position: 95-293
Cow position:
Alignm length: 202
Alignm identity: 158
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 121, 15

Conread position: 95-293
Cow position:
Alignm length: 200
Alignm identity: 153
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position:
Alignm length: 211
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 160
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 156
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 121, 20

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 157
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 159
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 121, 22

Conread position: 95-295
Cow position:
Alignm length: 204
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 22

Conread position: 95-316
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 121, 22

Conread position: 95-336
Cow position:
Alignm length: 247
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 22

Conread position: 95-348
Cow position:
Alignm length: 255
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 96-233
Cow position:
Alignm length: 139
Alignm identity: 116
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 120, 17

Conread position: 96-273
Cow position:
Alignm length: 179
Alignm identity: 148
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 120, 21

Conread position: 96-278
Cow position:
Alignm length: 186
Alignm identity: 150
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 40, 10

Conread position: 96-348
Cow position:
Alignm length: 259
Alignm identity: 194
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 54, 21

Conread position: 97-247
Cow position:
Alignm length: 152
Alignm identity: 122
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 119, 140

Conread position: 97-293
Cow position:
Alignm length: 198
Alignm identity: 155
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 119, 12

Conread position: 97-293
Cow position:
Alignm length: 198
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 20

Conread position: 97-293
Cow position:
Alignm length: 198
Alignm identity: 148
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 119, 12

Conread position: 97-293
Cow position:
Alignm length: 198
Alignm identity: 149
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 119, 12

Conread position: 97-371
Cow position:
Alignm length: 278
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 14

Conread position: 97-732
Cow position:
Alignm length: 654
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 20

Conread position: 98-292
Cow position:
Alignm length: 196
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 19

Conread position: 99-294
Cow position:
Alignm length: 198
Alignm identity: 163
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 5, 19

Conread position: 107-340
Cow position:
Alignm length: 238
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 7

Conread position: 109-293
Cow position:
Alignm length: 187
Alignm identity: 153
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 107, 0

Conread position: 112-241
Cow position:
Alignm length: 131
Alignm identity: 115
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 104, 0

Conread position: 112-251
Cow position:
Alignm length: 141
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 104, 46

Conread position: 112-272
Cow position:
Alignm length: 162
Alignm identity: 132
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 102, 0

Conread position: 112-274
Cow position:
Alignm length: 164
Alignm identity: 136
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 104, 133

Conread position: 112-280
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 112-287
Cow position:
Alignm length: 179
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 58

Conread position: 112-288
Cow position:
Alignm length: 179
Alignm identity: 147
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 104, 0

Conread position: 112-293
Cow position:
Alignm length: 185
Alignm identity: 147
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 104, 11

Conread position: 112-293
Cow position:
Alignm length: 183
Alignm identity: 143
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 104, 0

Conread position: 112-294
Cow position:
Alignm length: 184
Alignm identity: 148
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 104, 96

Conread position: 112-316
Cow position:
Alignm length: 208
Alignm identity: 156
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 104, 0

Conread position: 113-294
Cow position:
Alignm length: 183
Alignm identity: 145
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 103, 55

Conread position: 113-496
Cow position:
Alignm length: 385
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 216

Conread position: 114-261
Cow position:
Alignm length: 149
Alignm identity: 121
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 102, 68

Conread position: 114-280
Cow position:
Alignm length: 168
Alignm identity: 138
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 102, 0

Conread position: 114-280
Cow position:
Alignm length: 168
Alignm identity: 137
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 102, 0

Conread position: 114-280
Cow position:
Alignm length: 168
Alignm identity: 130
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 102, 123

Conread position: 114-290
Cow position:
Alignm length: 178
Alignm identity: 140
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 102, 9

Conread position: 114-293
Cow position:
Alignm length: 183
Alignm identity: 147
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position:
Alignm length: 181
Alignm identity: 140
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position:
Alignm length: 183
Alignm identity: 143
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position:
Alignm length: 183
Alignm identity: 145
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position:
Alignm length: 181
Alignm identity: 145
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position:
Alignm length: 183
Alignm identity: 151
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 102, 0

Conread position: 114-574
Cow position:
Alignm length: 466
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 65

Conread position: 115-293
Cow position:
Alignm length: 182
Alignm identity: 146
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 101, 24

Conread position: 120-294
Cow position:
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 36

Conread position: 134-292
Cow position:
Alignm length: 161
Alignm identity: 136
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 79, 0

Conread position: 148-324
Cow position:
Alignm length: 179
Alignm identity: 136
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 68, 91

Conread position: 155-294
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 162-292
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 8

Conread position: 176-264
Cow position:
Alignm length: 90
Alignm identity: 82
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 180-294
Cow position:
Alignm length: 116
Alignm identity: 97
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 188-294
Cow position:
Alignm length: 108
Alignm identity: 91
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 196-383
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 179, 0

Conread position: 255-445
Cow position:
Alignm length: 195
Alignm identity: 150
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 29, 74

Conread position: 268-690
Cow position:
Alignm length: 428
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 16

Conread position: 383-616
Cow position:
Alignm length: 234
Alignm identity: 161
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 116, 0

Conread position: 383-690
Cow position:
Alignm length: 314
Alignm identity: 211
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 56, 63

Conread position: 383-719
Cow position:
Alignm length: 340
Alignm identity: 232
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 248, 65

Conread position: 383-732
Cow position:
Alignm length: 354
Alignm identity: 247
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 55, 35

Conread position: 433-703
Cow position:
Alignm length: 275
Alignm identity: 200
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 75, 60

Conread position: 442-719
Cow position:
Alignm length: 282
Alignm identity: 187
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 70, 38

Conread position: 458-727
Cow position:
Alignm length: 276
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 24

Conread position: 458-732
Cow position:
Alignm length: 283
Alignm identity: 196
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 51, 26

Conread position: 468-732
Cow position:
Alignm length: 273
Alignm identity: 182
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 113, 18

Conread position: 482-722
Cow position:
Alignm length: 244
Alignm identity: 172
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 126, 19

Conread position: 483-732
Cow position:
Alignm length: 267
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 83

Conread position: 497-723
Cow position:
Alignm length: 233
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 43

Conread position: 498-732
Cow position:
Alignm length: 237
Alignm identity: 172
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 10, 43

Conread position: 501-726
Cow position:
Alignm length: 242
Alignm identity: 167
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 10, 65

Conread position: 510-732
Cow position:
Alignm length: 227
Alignm identity: 158
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 130, 48

Conread position: 516-689
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 29

Conread position: 552-727
Cow position:
Alignm length: 178
Alignm identity: 137
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 118, 16

Conread position: 561-727
Cow position:
Alignm length: 171
Alignm identity: 139
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 36, 70

Conread position: 588-726
Cow position:
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 603-732
Cow position:
Alignm length: 130
Alignm identity: 107
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 626-727
Cow position:
Alignm length: 102
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 626-727
Cow position:
Alignm length: 102
Alignm identity: 84
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 626-728
Cow position:
Alignm length: 104
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 626-732
Cow position:
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position:
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position:
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position:
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position:
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position:
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 630-732
Cow position:
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 632-727
Cow position:
Alignm length: 96
Alignm identity: 82
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 632-732
Cow position:
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 34

Conread position: 646-727
Cow position:
Alignm length: 82
Alignm identity: 73
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.