Cow genome map

Conread name: Ss1.1-Ova1-OVRM10012F06.5

Conread position: 93-385
Cow position: chr12:21500171-21500452 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 40, 16

Conread position: 95-287
Cow position: chr12:21254591-21254399 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 121, 22

Conread position: 95-288
Cow position: chr12:2864-3056 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position: chr12:1402556-1402752 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 47, 22

Conread position: 95-293
Cow position: chr12:3360969-3361168 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 157
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position: chr12:27932880-27932683 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position: chr12:32653609-32653808 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 157
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position: chr12:43031318-43031121 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position: chr12:2282611-2282809 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position: chr12:5861219-5861416 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 22

Conread position: 95-294
Cow position: chr12:6406583-6406388 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 121, 10

Conread position: 95-294
Cow position: chr12:8678057-8677858 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 103, 22

Conread position: 95-294
Cow position: chr12:14662568-14662370 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position: chr12:42859762-42859564 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 121, 22

Conread position: 95-323
Cow position: chr12:28765954-28765727 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 121, 22

Conread position: 95-324
Cow position: chr12:21198023-21198256 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 40, 10

Conread position: 95-332
Cow position: chr12:8311246-8311488 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 22

Conread position: 95-332
Cow position: chr12:21941830-21942070 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 183
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 121, 22

Conread position: 96-280
Cow position: chr12:21426760-21426943 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 146
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 120, 21

Conread position: 97-293
Cow position: chr12:33986229-33986424 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 119, 12

Conread position: 97-294
Cow position: chr12:22332692-22332887 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 155
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 119, 20

Conread position: 112-281
Cow position: chr12:20998052-20997883 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 112-293
Cow position: chr12:251976-251796 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 104, 27

Conread position: 112-293
Cow position: chr12:22205667-22205486 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 104, 130

Conread position: 112-293
Cow position: chr12:25100981-25100799 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 104, 0

Conread position: 112-294
Cow position: chr12:11098322-11098505 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 73, 0

Conread position: 112-294
Cow position: chr12:45261703-45261886 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 154
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 112-371
Cow position: chr12:23240084-23240348 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 104, 79

Conread position: 113-294
Cow position: chr12:21902020-21902202 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 151
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 103, 62

Conread position: 113-317
Cow position: chr12:2838773-2838575 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 163
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 103, 86

Conread position: 114-293
Cow position: chr12:37558637-37558820 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 150
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 27, 0

Conread position: 115-294
Cow position: chr12:26946909-26946727 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 81, 123

Conread position: 116-547
Cow position: chr12:15951180-15950759 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 138

Conread position: 130-357
Cow position: chr12:18501132-18501351 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 8, 47

Conread position: 176-294
Cow position: chr12:31544922-31545041 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 185-293
Cow position: chr12:4157530-4157639 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 208-361
Cow position: chr12:48405430-48405577 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 383-574
Cow position: chr12:48405679-48405862 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 436-724
Cow position: chr12:348475-348763 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 64, 9

Conread position: 462-727
Cow position: chr12:21500560-21500820 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 176
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 192, 51

Conread position: 469-704
Cow position: chr12:1138216-1138449 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 20, 98

Conread position: 486-723
Cow position: chr12:1869403-1869647 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 588-727
Cow position: chr12:44005173-44005034 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 626-732
Cow position: chr12:11098503-11098607 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 632-727
Cow position: chr12:14662369-14662273 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 632-727
Cow position: chr12:42859563-42859469 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 23

Show alignments to all cow chromosomes.