Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10012F06.5 |
| Conread position: | 92-293 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 124, 30 |
| Conread position: | 95-213 |
| Cow position: | |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 95-264 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 121, 10 |
| Conread position: | 95-269 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-273 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 153 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 22 |
| Conread position: | 95-280 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-280 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 121, 21 |
| Conread position: | 95-280 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 34, 22 |
| Conread position: | 95-288 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 158 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-288 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 159 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-293 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 121, 18 |
| Conread position: | 95-293 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 160 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-293 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 121, 13 |
| Conread position: | 95-293 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 119, 22 |
| Conread position: | 95-293 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 34, 22 |
| Conread position: | 95-293 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 121, 14 |
| Conread position: | 95-293 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-294 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 156 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-294 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 95-294 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 162 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-294 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-295 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-316 |
| Cow position: | |
| Alignm length: | 225 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 15 |
| Conread position: | 95-324 |
| Cow position: | |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 215, 22 |
| Conread position: | 95-332 |
| Cow position: | |
| Alignm length: | 243 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 22 |
| Conread position: | 95-339 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 122, 14 |
| Conread position: | 95-354 |
| Cow position: | |
| Alignm length: | 262 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 22 |
| Conread position: | 96-293 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 161 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 120, 21 |
| Conread position: | 96-293 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 159 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 120, 21 |
| Conread position: | 96-294 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 21 |
| Conread position: | 96-588 |
| Cow position: | |
| Alignm length: | 503 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 23 |
| Conread position: | 97-293 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 124, 12 |
| Conread position: | 97-316 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 174 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 119, 12 |
| Conread position: | 101-319 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 115, 15 |
| Conread position: | 112-243 |
| Cow position: | |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 112-293 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 112-294 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 157 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 112-294 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 112-294 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 55, 90 |
| Conread position: | 112-294 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 104, 169 |
| Conread position: | 112-727 |
| Cow position: | |
| Alignm length: | 628 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 28 |
| Conread position: | 114-293 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 114-293 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 149 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 114-293 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 148 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 117-371 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 99, 117 |
| Conread position: | 119-294 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 22, 92 |
| Conread position: | 121-371 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 192, 69 |
| Conread position: | 122-333 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 172 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 94, 200 |
| Conread position: | 128-280 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 129-279 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 87, 35 |
| Conread position: | 150-294 |
| Cow position: | |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 66, 23 |
| Conread position: | 160-294 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 160-696 |
| Cow position: | |
| Alignm length: | 539 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 114 |
| Conread position: | 163-294 |
| Cow position: | |
| Alignm length: | 133 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 55, 12 |
| Conread position: | 252-732 |
| Cow position: | |
| Alignm length: | 484 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 38 |
| Conread position: | 376-689 |
| Cow position: | |
| Alignm length: | 328 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 13, 192 |
| Conread position: | 383-580 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 177, 124 |
| Conread position: | 383-726 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 50 |
| Conread position: | 390-732 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 118 |
| Conread position: | 442-718 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 21 |
| Conread position: | 443-717 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 178, 57 |
| Conread position: | 449-732 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 165, 34 |
| Conread position: | 450-719 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 48 |
| Conread position: | 474-709 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 497-719 |
| Cow position: | |
| Alignm length: | 228 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 17, 72 |
| Conread position: | 497-726 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 172, 18 |
| Conread position: | 571-732 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 626-727 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 626-732 |
| Cow position: | |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 626-732 |
| Cow position: | |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 626-732 |
| Cow position: | |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 632-727 |
| Cow position: | |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 632-732 |
| Cow position: | |
| Alignm length: | 101 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 632-732 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
Show alignments to all cow chromosomes.