Cow genome map
Conread name: | Ss1.1-Ova1-OVRM10012F06.5 |
Conread position: | 92-293 |
Cow position: | chr13:31734240-31734042 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 155 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 124, 30 |
Conread position: | 95-213 |
Cow position: | chr13:30237962-30238078 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 94 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 95-264 |
Cow position: | chr13:47230143-47229975 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 139 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 121, 10 |
Conread position: | 95-269 |
Cow position: | chr13:6668279-6668106 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 135 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-273 |
Cow position: | chr13:2908606-2908428 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 153 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 22 |
Conread position: | 95-280 |
Cow position: | chr13:1593311-1593127 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 146 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-280 |
Cow position: | chr13:9044345-9044528 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 147 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 121, 21 |
Conread position: | 95-280 |
Cow position: | chr13:32986213-32986029 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 150 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 34, 22 |
Conread position: | 95-288 |
Cow position: | chr13:31832444-31832633 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 158 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-288 |
Cow position: | chr13:56730441-56730251 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 159 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-293 |
Cow position: | chr13:4483641-4483835 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 148 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 121, 18 |
Conread position: | 95-293 |
Cow position: | chr13:13324593-13324792 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 160 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-293 |
Cow position: | chr13:17308319-17308518 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 156 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 121, 13 |
Conread position: | 95-293 |
Cow position: | chr13:21840350-21840151 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 159 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 119, 22 |
Conread position: | 95-293 |
Cow position: | chr13:35030400-35030592 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 150 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 34, 22 |
Conread position: | 95-293 |
Cow position: | chr13:60466181-60466380 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 159 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 121, 14 |
Conread position: | 95-293 |
Cow position: | chr13:62327740-62327543 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 169 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-294 |
Cow position: | chr13:15924540-15924342 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 156 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-294 |
Cow position: | chr13:30657130-30656935 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 162 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 95-294 |
Cow position: | chr13:33824887-33824693 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 162 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-294 |
Cow position: | chr13:35757085-35757283 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 155 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-295 |
Cow position: | chr13:15520671-15520472 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 155 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-316 |
Cow position: | chr13:34911534-34911313 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 15 |
Conread position: | 95-324 |
Cow position: | chr13:34186841-34186615 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 171 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 215, 22 |
Conread position: | 95-332 |
Cow position: | chr13:34142815-34142575 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 22 |
Conread position: | 95-339 |
Cow position: | chr13:4178807-4178561 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 180 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 122, 14 |
Conread position: | 95-354 |
Cow position: | chr13:34936991-34937248 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 22 |
Conread position: | 96-293 |
Cow position: | chr13:2388973-2388775 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 161 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 120, 21 |
Conread position: | 96-293 |
Cow position: | chr13:34325829-34325634 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 159 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 120, 21 |
Conread position: | 96-294 |
Cow position: | chr13:34693008-34693207 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 165 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 21 |
Conread position: | 96-588 |
Cow position: | chr13:54284417-54284904 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 23 |
Conread position: | 97-293 |
Cow position: | chr13:32737976-32737781 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 147 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 124, 12 |
Conread position: | 97-316 |
Cow position: | chr13:4872923-4873143 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 174 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 119, 12 |
Conread position: | 101-319 |
Cow position: | chr13:46732376-46732163 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 161 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 115, 15 |
Conread position: | 112-243 |
Cow position: | chr13:23003657-23003527 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 104 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 109, 0 |
Conread position: | 112-293 |
Cow position: | chr13:32544918-32545100 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 142 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 112-294 |
Cow position: | chr13:3277013-3277196 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 157 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 112-294 |
Cow position: | chr13:4940947-4941130 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 142 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 112-294 |
Cow position: | chr13:31612476-31612294 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 142 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 55, 90 |
Conread position: | 112-294 |
Cow position: | chr13:34042510-34042327 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 146 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 104, 169 |
Conread position: | 112-727 |
Cow position: | chr13:20542514-20541898 (view UCSC Genome Browser custom track) |
Alignm length: | 628 |
Alignm identity: | 492 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 28 |
Conread position: | 114-293 |
Cow position: | chr13:3058250-3058067 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 147 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 114-293 |
Cow position: | chr13:49973545-49973727 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 149 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 114-293 |
Cow position: | chr13:50109323-50109505 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 148 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 117-371 |
Cow position: | chr13:34767422-34767181 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 186 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 99, 117 |
Conread position: | 119-294 |
Cow position: | chr13:34868606-34868784 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 145 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 22, 92 |
Conread position: | 121-371 |
Cow position: | chr13:34111163-34111401 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 184 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 192, 69 |
Conread position: | 122-333 |
Cow position: | chr13:3567663-3567878 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 172 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 94, 200 |
Conread position: | 128-280 |
Cow position: | chr13:676751-676904 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 127 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 129-279 |
Cow position: | chr13:3654449-3654299 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 121 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 87, 35 |
Conread position: | 150-294 |
Cow position: | chr13:22765921-22766065 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 110 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 66, 23 |
Conread position: | 160-294 |
Cow position: | chr13:11799855-11799719 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 107 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 160-696 |
Cow position: | chr13:15451649-15451132 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 114 |
Conread position: | 163-294 |
Cow position: | chr13:33927675-33927545 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 109 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 55, 12 |
Conread position: | 252-732 |
Cow position: | chr13:26843793-26844235 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 237, 38 |
Conread position: | 376-689 |
Cow position: | chr13:34111482-34111806 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 218 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 13, 192 |
Conread position: | 383-580 |
Cow position: | chr13:11064605-11064409 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 148 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 177, 124 |
Conread position: | 383-726 |
Cow position: | chr13:34767069-34766734 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 50 |
Conread position: | 390-732 |
Cow position: | chr13:43983277-43982938 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 118 |
Conread position: | 442-718 |
Cow position: | chr13:34937348-34937617 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 21 |
Conread position: | 443-717 |
Cow position: | chr13:11763961-11763688 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 183 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 178, 57 |
Conread position: | 449-732 |
Cow position: | chr13:60700987-60700703 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 186 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 165, 34 |
Conread position: | 450-719 |
Cow position: | chr13:29202501-29202229 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 181 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 55, 48 |
Conread position: | 474-709 |
Cow position: | chr13:34186618-34186394 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 165 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 497-719 |
Cow position: | chr13:48357478-48357695 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 176 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 17, 72 |
Conread position: | 497-726 |
Cow position: | chr13:46731809-46731585 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 165 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 172, 18 |
Conread position: | 571-732 |
Cow position: | chr13:11064185-11064024 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 124 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 626-727 |
Cow position: | chr13:22766063-22766163 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 85 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 626-732 |
Cow position: | chr13:15924344-15924240 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 88 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 626-732 |
Cow position: | chr13:23003269-23003165 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 88 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 626-732 |
Cow position: | chr13:35757281-35757385 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 88 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 632-727 |
Cow position: | chr13:30303319-30303415 (view UCSC Genome Browser custom track) |
Alignm length: | 97 |
Alignm identity: | 82 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 632-732 |
Cow position: | chr13:30238289-30238389 (view UCSC Genome Browser custom track) |
Alignm length: | 101 |
Alignm identity: | 88 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 632-732 |
Cow position: | chr13:34042326-34042225 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 85 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 13, 0 |
Show alignments to all cow chromosomes.