Cow genome map

Conread name: Ss1.1-Ova1-OVRM10012F06.5

Conread position: 79-287
Cow position:
Alignm length: 213
Alignm identity: 164
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 11, 38

Conread position: 88-294
Cow position:
Alignm length: 208
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 29

Conread position: 89-385
Cow position:
Alignm length: 302
Alignm identity: 217
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 127, 12

Conread position: 92-293
Cow position:
Alignm length: 205
Alignm identity: 162
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 124, 25

Conread position: 93-658
Cow position:
Alignm length: 577
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 24

Conread position: 95-248
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 121, 12

Conread position: 95-274
Cow position:
Alignm length: 181
Alignm identity: 144
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 121, 22

Conread position: 95-274
Cow position:
Alignm length: 181
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 121, 22

Conread position: 95-274
Cow position:
Alignm length: 181
Alignm identity: 139
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 121, 22

Conread position: 95-280
Cow position:
Alignm length: 187
Alignm identity: 149
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 118, 22

Conread position: 95-280
Cow position:
Alignm length: 188
Alignm identity: 148
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 49, 10

Conread position: 95-280
Cow position:
Alignm length: 186
Alignm identity: 151
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 10, 0

Conread position: 95-288
Cow position:
Alignm length: 195
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 24

Conread position: 95-288
Cow position:
Alignm length: 195
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-288
Cow position:
Alignm length: 195
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 121, 15

Conread position: 95-292
Cow position:
Alignm length: 199
Alignm identity: 152
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 121, 22

Conread position: 95-292
Cow position:
Alignm length: 200
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-292
Cow position:
Alignm length: 200
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 24

Conread position: 95-293
Cow position:
Alignm length: 200
Alignm identity: 154
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position:
Alignm length: 200
Alignm identity: 158
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position:
Alignm length: 200
Alignm identity: 153
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position:
Alignm length: 200
Alignm identity: 150
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position:
Alignm length: 202
Alignm identity: 159
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 121, 20

Conread position: 95-293
Cow position:
Alignm length: 202
Alignm identity: 163
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position:
Alignm length: 204
Alignm identity: 156
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 65, 14

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 14

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 159
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 121, 14

Conread position: 95-294
Cow position:
Alignm length: 208
Alignm identity: 161
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 155
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position:
Alignm length: 202
Alignm identity: 155
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 119, 22

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 156
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 156
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position:
Alignm length: 202
Alignm identity: 162
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 22

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position:
Alignm length: 202
Alignm identity: 157
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 78, 22

Conread position: 95-294
Cow position:
Alignm length: 200
Alignm identity: 155
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 22, 0

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 154
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 121, 25

Conread position: 95-294
Cow position:
Alignm length: 200
Alignm identity: 151
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 0

Conread position: 95-301
Cow position:
Alignm length: 208
Alignm identity: 159
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 121, 17

Conread position: 95-309
Cow position:
Alignm length: 217
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 12

Conread position: 95-316
Cow position:
Alignm length: 223
Alignm identity: 168
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 122, 22

Conread position: 95-316
Cow position:
Alignm length: 225
Alignm identity: 172
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 118, 22

Conread position: 95-316
Cow position:
Alignm length: 225
Alignm identity: 169
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 121, 22

Conread position: 95-317
Cow position:
Alignm length: 224
Alignm identity: 166
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 121, 22

Conread position: 95-327
Cow position:
Alignm length: 236
Alignm identity: 173
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 121, 28

Conread position: 95-332
Cow position:
Alignm length: 241
Alignm identity: 179
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 119, 22

Conread position: 95-332
Cow position:
Alignm length: 242
Alignm identity: 178
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 121, 22

Conread position: 95-333
Cow position:
Alignm length: 244
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 232

Conread position: 95-362
Cow position:
Alignm length: 270
Alignm identity: 177
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 218, 20

Conread position: 95-364
Cow position:
Alignm length: 272
Alignm identity: 197
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 121, 21

Conread position: 95-366
Cow position:
Alignm length: 281
Alignm identity: 188
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 205, 22

Conread position: 95-366
Cow position:
Alignm length: 282
Alignm identity: 194
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 121, 21

Conread position: 95-366
Cow position:
Alignm length: 273
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-371
Cow position:
Alignm length: 278
Alignm identity: 206
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 121, 22

Conread position: 95-385
Cow position:
Alignm length: 296
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 22

Conread position: 95-385
Cow position:
Alignm length: 293
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 21

Conread position: 95-385
Cow position:
Alignm length: 294
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 22

Conread position: 95-727
Cow position:
Alignm length: 646
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 24

Conread position: 96-290
Cow position:
Alignm length: 196
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 21

Conread position: 97-293
Cow position:
Alignm length: 198
Alignm identity: 150
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 119, 12

Conread position: 97-294
Cow position:
Alignm length: 200
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 20

Conread position: 97-698
Cow position:
Alignm length: 607
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 12

Conread position: 104-337
Cow position:
Alignm length: 255
Alignm identity: 188
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 9, 251

Conread position: 109-512
Cow position:
Alignm length: 407
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 226

Conread position: 112-262
Cow position:
Alignm length: 152
Alignm identity: 123
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 104, 0

Conread position: 112-280
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 104, 114

Conread position: 112-280
Cow position:
Alignm length: 170
Alignm identity: 136
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 104, 132

Conread position: 112-293
Cow position:
Alignm length: 187
Alignm identity: 155
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 104, 34

Conread position: 112-294
Cow position:
Alignm length: 184
Alignm identity: 144
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 104, 0

Conread position: 112-294
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 104, 46

Conread position: 112-294
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 104, 0

Conread position: 112-294
Cow position:
Alignm length: 184
Alignm identity: 144
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 104, 11

Conread position: 112-366
Cow position:
Alignm length: 257
Alignm identity: 181
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 104, 37

Conread position: 113-294
Cow position:
Alignm length: 185
Alignm identity: 149
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 28, 0

Conread position: 114-293
Cow position:
Alignm length: 183
Alignm identity: 144
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position:
Alignm length: 183
Alignm identity: 143
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position:
Alignm length: 183
Alignm identity: 149
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position:
Alignm length: 183
Alignm identity: 147
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 102, 60

Conread position: 114-294
Cow position:
Alignm length: 182
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 114-340
Cow position:
Alignm length: 233
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 220

Conread position: 127-324
Cow position:
Alignm length: 201
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 10, 37

Conread position: 149-372
Cow position:
Alignm length: 224
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 162-361
Cow position:
Alignm length: 202
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 86

Conread position: 166-280
Cow position:
Alignm length: 116
Alignm identity: 99
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 167-281
Cow position:
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 364-731
Cow position:
Alignm length: 371
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 127

Conread position: 383-662
Cow position:
Alignm length: 281
Alignm identity: 205
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 125, 36

Conread position: 383-681
Cow position:
Alignm length: 302
Alignm identity: 215
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 40, 18

Conread position: 383-690
Cow position:
Alignm length: 323
Alignm identity: 221
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 65, 107

Conread position: 383-722
Cow position:
Alignm length: 360
Alignm identity: 241
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 66

Conread position: 383-728
Cow position:
Alignm length: 355
Alignm identity: 249
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 129, 18

Conread position: 422-722
Cow position:
Alignm length: 322
Alignm identity: 217
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 80, 34

Conread position: 443-722
Cow position:
Alignm length: 283
Alignm identity: 193
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 197, 55

Conread position: 443-732
Cow position:
Alignm length: 292
Alignm identity: 191
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 37, 44

Conread position: 469-732
Cow position:
Alignm length: 270
Alignm identity: 199
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 46, 14

Conread position: 479-727
Cow position:
Alignm length: 249
Alignm identity: 185
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 24, 0

Conread position: 482-722
Cow position:
Alignm length: 247
Alignm identity: 168
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 14

Conread position: 483-722
Cow position:
Alignm length: 246
Alignm identity: 174
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 99

Conread position: 484-732
Cow position:
Alignm length: 256
Alignm identity: 182
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 29, 92

Conread position: 486-727
Cow position:
Alignm length: 246
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 127, 31

Conread position: 495-727
Cow position:
Alignm length: 242
Alignm identity: 172
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 64

Conread position: 507-696
Cow position:
Alignm length: 191
Alignm identity: 144
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 25, 33

Conread position: 510-732
Cow position:
Alignm length: 228
Alignm identity: 173
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 107, 56

Conread position: 511-732
Cow position:
Alignm length: 231
Alignm identity: 169
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 51, 80

Conread position: 546-732
Cow position:
Alignm length: 192
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 34

Conread position: 614-723
Cow position:
Alignm length: 110
Alignm identity: 92
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 618-727
Cow position:
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 619-732
Cow position:
Alignm length: 114
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 626-720
Cow position:
Alignm length: 95
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 626-727
Cow position:
Alignm length: 102
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 626-732
Cow position:
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position:
Alignm length: 107
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position:
Alignm length: 107
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position:
Alignm length: 109
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 15

Conread position: 630-727
Cow position:
Alignm length: 98
Alignm identity: 82
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 630-732
Cow position:
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 630-732
Cow position:
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 632-732
Cow position:
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 632-732
Cow position:
Alignm length: 105
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 0

Show alignments to all cow chromosomes.