Cow genome map

Conread name: Ss1.1-Ova1-OVRM10012F06.5

Conread position: 27-732
Cow position: chr22:3306745-3306035 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 29

Conread position: 42-293
Cow position: chr22:44369610-44369362 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 44, 28

Conread position: 92-501
Cow position: chr22:1270467-1270083 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 25

Conread position: 93-287
Cow position: chr22:117777-117583 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 24

Conread position: 93-294
Cow position: chr22:19143634-19143434 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 123, 24

Conread position: 95-243
Cow position: chr22:32485285-32485139 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 125
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 121, 22

Conread position: 95-260
Cow position: chr22:44396518-44396681 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 118, 22

Conread position: 95-262
Cow position: chr22:45879543-45879376 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 147
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 22

Conread position: 95-273
Cow position: chr22:693693-693870 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 146
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 121, 22

Conread position: 95-276
Cow position: chr22:37131711-37131880 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 118, 22

Conread position: 95-288
Cow position: chr22:18027347-18027538 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 156
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 119, 24

Conread position: 95-288
Cow position: chr22:41238240-41238430 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 22

Conread position: 95-289
Cow position: chr22:1319464-1319658 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 19

Conread position: 95-290
Cow position: chr22:3278287-3278095 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 157
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 121, 21

Conread position: 95-293
Cow position: chr22:1878859-1879059 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 162
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 121, 21

Conread position: 95-293
Cow position: chr22:6020729-6020928 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 163
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position: chr22:39469456-39469259 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position: chr22:157840-157641 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 161
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position: chr22:525628-525428 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 158
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 46, 13

Conread position: 95-294
Cow position: chr22:560638-560440 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 108, 22

Conread position: 95-294
Cow position: chr22:5672804-5673002 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position: chr22:5932930-5932735 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 159
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 46, 14

Conread position: 95-294
Cow position: chr22:31313408-31313604 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position: chr22:31334966-31334773 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 121, 14

Conread position: 95-294
Cow position: chr22:38938016-38937818 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 22

Conread position: 95-294
Cow position: chr22:42771522-42771720 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 160
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position: chr22:42991239-42991437 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 158
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position: chr22:46547597-46547399 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-295
Cow position: chr22:36533676-36533475 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-301
Cow position: chr22:18816318-18816114 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 160
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 121, 10

Conread position: 95-315
Cow position: chr22:16200540-16200758 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 173
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 40, 22

Conread position: 95-317
Cow position: chr22:44475311-44475522 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 159, 22

Conread position: 95-321
Cow position: chr22:8875056-8875278 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 121, 14

Conread position: 95-325
Cow position: chr22:21589391-21589612 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 181
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 121, 22

Conread position: 95-330
Cow position: chr22:44352890-44352664 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 0

Conread position: 95-332
Cow position: chr22:15851397-15851624 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 180
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 201, 12

Conread position: 95-333
Cow position: chr22:39882109-39881868 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 22

Conread position: 95-348
Cow position: chr22:34598734-34598979 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 121, 22

Conread position: 95-371
Cow position: chr22:7277588-7277858 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 16

Conread position: 95-403
Cow position: chr22:6503610-6503304 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 21

Conread position: 95-534
Cow position: chr22:8136135-8135707 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 23

Conread position: 95-712
Cow position: chr22:41419628-41419031 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 17

Conread position: 95-727
Cow position: chr22:1283583-1282959 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-732
Cow position: chr22:13917570-13918195 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-732
Cow position: chr22:23853399-23854029 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 18

Conread position: 95-732
Cow position: chr22:44609663-44610266 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 22

Conread position: 96-293
Cow position: chr22:35672288-35672090 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 160
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 120, 21

Conread position: 96-350
Cow position: chr22:13675103-13674852 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 21

Conread position: 97-280
Cow position: chr22:15313884-15313701 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 147
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 45, 20

Conread position: 97-287
Cow position: chr22:5308171-5308363 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 154
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 45, 20

Conread position: 97-296
Cow position: chr22:10546714-10546915 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 119, 12

Conread position: 97-406
Cow position: chr22:11031029-11031337 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 10

Conread position: 112-209
Cow position: chr22:31936618-31936521 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 112-225
Cow position: chr22:36274891-36275005 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 24, 98

Conread position: 112-250
Cow position: chr22:8740820-8740686 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 104, 46

Conread position: 112-293
Cow position: chr22:17328657-17328475 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 104, 0

Conread position: 112-294
Cow position: chr22:34168414-34168596 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 104, 135

Conread position: 112-294
Cow position: chr22:36736840-36737024 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 112-294
Cow position: chr22:36861448-36861265 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 104, 0

Conread position: 112-294
Cow position: chr22:44934061-44934244 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 104, 0

Conread position: 112-294
Cow position: chr22:46853425-46853607 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 154
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 65

Conread position: 112-350
Cow position: chr22:1048489-1048721 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 104, 27

Conread position: 113-274
Cow position: chr22:36183841-36184001 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 132
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 103, 47

Conread position: 114-288
Cow position: chr22:5233221-5233046 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 146
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position: chr22:537185-537367 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 151
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position: chr22:20240757-20240576 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 102, 97

Conread position: 114-293
Cow position: chr22:27284115-27284297 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 149
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position: chr22:27309689-27309507 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 147
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position: chr22:44489971-44490151 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 102, 0

Conread position: 115-280
Cow position: chr22:46581502-46581337 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 139
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 101, 44

Conread position: 117-280
Cow position: chr22:10909746-10909582 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 136
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 99, 0

Conread position: 118-251
Cow position: chr22:46635626-46635492 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 120-235
Cow position: chr22:48004349-48004462 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 124-365
Cow position: chr22:1321687-1321921 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 190
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 112

Conread position: 139-294
Cow position: chr22:1860848-1861004 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 128
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 77, 0

Conread position: 139-295
Cow position: chr22:37266082-37266241 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 77, 0

Conread position: 142-293
Cow position: chr22:16813998-16814150 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 148-280
Cow position: chr22:327050-326919 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 113
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 69, 13

Conread position: 173-294
Cow position: chr22:31936637-31936759 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 190-287
Cow position: chr22:13773056-13773153 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 52

Conread position: 193-293
Cow position: chr22:37072915-37072815 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 15

Conread position: 195-292
Cow position: chr22:24950261-24950359 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 285-727
Cow position: chr22:35907460-35907032 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 11

Conread position: 293-478
Cow position: chr22:37132147-37132323 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 293-649
Cow position: chr22:46547834-46548170 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 36

Conread position: 306-732
Cow position: chr22:6503201-6502768 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 42

Conread position: 350-732
Cow position: chr22:1322124-1322489 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 41

Conread position: 383-732
Cow position: chr22:11782135-11781787 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 230
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 34

Conread position: 395-522
Cow position: chr22:11031465-11031591 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 113, 96

Conread position: 395-680
Cow position: chr22:8740404-8740137 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 113, 68

Conread position: 443-732
Cow position: chr22:44475955-44476237 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 206
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 69, 54

Conread position: 477-728
Cow position: chr22:11031868-11032113 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 88, 0

Conread position: 483-732
Cow position: chr22:310513-310751 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 25, 35

Conread position: 485-727
Cow position: chr22:1269669-1269432 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 23, 61

Conread position: 507-718
Cow position: chr22:37132574-37132770 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 188, 98

Conread position: 604-732
Cow position: chr22:34599644-34599771 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 42, 15

Conread position: 626-727
Cow position: chr22:560442-560343 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 626-727
Cow position: chr22:46853605-46853704 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 17, 0

Conread position: 630-732
Cow position: chr22:17328472-17328373 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 11, 0

Conread position: 630-732
Cow position: chr22:39469256-39469156 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 11, 0

Conread position: 632-727
Cow position: chr22:36184022-36184118 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 13, 0

Conread position: 632-732
Cow position: chr22:1522277-1522377 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 634-719
Cow position: chr22:326902-326817 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 75
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.