Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10012F06.5 |
| Conread position: | 67-510 |
| Cow position: | chr27:8561578-8562019 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 39 |
| Conread position: | 92-288 |
| Cow position: | chr27:16439389-16439587 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 95-244 |
| Cow position: | chr27:2364817-2364966 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-261 |
| Cow position: | chr27:15638288-15638125 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-276 |
| Cow position: | chr27:26227360-26227535 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 121, 21 |
| Conread position: | 95-280 |
| Cow position: | chr27:893274-893458 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 120, 9 |
| Conread position: | 95-280 |
| Cow position: | chr27:1209419-1209602 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 151 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-294 |
| Cow position: | chr27:9993138-9992938 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 110, 22 |
| Conread position: | 95-294 |
| Cow position: | chr27:16432487-16432681 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 121, 24 |
| Conread position: | 95-294 |
| Cow position: | chr27:25002469-25002270 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 22 |
| Conread position: | 95-294 |
| Cow position: | chr27:27662967-27663160 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 95-315 |
| Cow position: | chr27:27753129-27752911 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-371 |
| Cow position: | chr27:26034988-26034720 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 95-722 |
| Cow position: | chr27:26555937-26555311 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 97-293 |
| Cow position: | chr27:16034325-16034128 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 160 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 119, 15 |
| Conread position: | 99-294 |
| Cow position: | chr27:27051747-27051949 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 164 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 67, 15 |
| Conread position: | 102-294 |
| Cow position: | chr27:14460384-14460191 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 109-293 |
| Cow position: | chr27:15541408-15541593 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 112-279 |
| Cow position: | chr27:26324897-26325065 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 112-294 |
| Cow position: | chr27:5910945-5911128 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 112-294 |
| Cow position: | chr27:15277987-15277808 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 150 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 112-319 |
| Cow position: | chr27:25804813-25804601 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 103, 72 |
| Conread position: | 115-287 |
| Cow position: | chr27:28078533-28078706 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 34, 56 |
| Conread position: | 122-377 |
| Cow position: | chr27:22316674-22316930 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 24, 165 |
| Conread position: | 142-259 |
| Cow position: | chr27:23335292-23335409 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 74, 30 |
| Conread position: | 515-727 |
| Cow position: | chr27:1138526-1138745 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 29, 82 |
| Conread position: | 545-732 |
| Cow position: | chr27:8567901-8568087 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 70, 20 |
| Conread position: | 553-732 |
| Cow position: | chr27:15638178-15638003 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 9, 26 |
| Conread position: | 626-732 |
| Cow position: | chr27:893470-893574 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 626-732 |
| Cow position: | chr27:9992940-9992836 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 626-732 |
| Cow position: | chr27:14460193-14460090 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 630-732 |
| Cow position: | chr27:23335430-23335530 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
Show alignments to all cow chromosomes.