Cow genome map

Conread name: Ss1.1-Ova1-OVRM10012F06.5

Conread position: 75-414
Cow position: chr28:10619025-10618695 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 44

Conread position: 92-732
Cow position: chr28:5797540-5798157 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 25

Conread position: 93-293
Cow position: chr28:15377882-15377684 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 157
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 123, 12

Conread position: 95-249
Cow position: chr28:15920354-15920200 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 85, 22

Conread position: 95-262
Cow position: chr28:1504963-1505129 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 140
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 121, 14

Conread position: 95-262
Cow position: chr28:17667402-17667236 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 137
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 121, 22

Conread position: 95-262
Cow position: chr28:22261039-22260873 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 137
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 121, 25

Conread position: 95-274
Cow position: chr28:1931873-1931695 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 150
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 121, 22

Conread position: 95-279
Cow position: chr28:24587546-24587729 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 121, 22

Conread position: 95-280
Cow position: chr28:5751595-5751410 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 148
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 99, 22

Conread position: 95-281
Cow position: chr28:7901466-7901658 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 158
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 113, 17

Conread position: 95-287
Cow position: chr28:9136939-9136749 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 158
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position: chr28:782506-782703 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position: chr28:6780222-6780023 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 162
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 121, 14

Conread position: 95-293
Cow position: chr28:7740597-7740789 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 73, 21

Conread position: 95-293
Cow position: chr28:12410112-12409917 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position: chr28:17324239-17324036 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 60, 22

Conread position: 95-294
Cow position: chr28:2592026-2592224 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position: chr28:9954244-9954442 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position: chr28:10581875-10581675 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position: chr28:12150422-12150613 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 0

Conread position: 95-294
Cow position: chr28:14705560-14705362 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 47, 22

Conread position: 95-294
Cow position: chr28:18520352-18520150 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 158
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 59, 14

Conread position: 95-294
Cow position: chr28:24667690-24667888 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 19

Conread position: 95-294
Cow position: chr28:29819845-29820043 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 120, 21

Conread position: 95-294
Cow position: chr28:32792268-32792071 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 22, 0

Conread position: 95-294
Cow position: chr28:33252425-33252621 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 121, 21

Conread position: 95-365
Cow position: chr28:29092873-29092612 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 191
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 121, 22

Conread position: 95-365
Cow position: chr28:34649055-34649323 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 121, 12

Conread position: 95-366
Cow position: chr28:10463041-10462769 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 198
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 41, 22

Conread position: 95-521
Cow position: chr28:2989606-2989175 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 22

Conread position: 95-723
Cow position: chr28:7790175-7789549 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 22

Conread position: 95-727
Cow position: chr28:10071096-10071690 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-727
Cow position: chr28:21359113-21359744 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-732
Cow position: chr28:5812803-5813420 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 24

Conread position: 96-294
Cow position: chr28:1167770-1167572 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 157
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 41, 21

Conread position: 96-294
Cow position: chr28:7002102-7002299 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 159
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 120, 20

Conread position: 96-332
Cow position: chr28:8721335-8721101 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 21

Conread position: 97-251
Cow position: chr28:22828127-22828282 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 119, 19

Conread position: 97-317
Cow position: chr28:2724777-2724560 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 119, 12

Conread position: 98-414
Cow position: chr28:21325907-21326209 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 19

Conread position: 99-294
Cow position: chr28:1387279-1387091 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 154
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 117, 18

Conread position: 107-332
Cow position: chr28:15682242-15682458 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 109, 92

Conread position: 112-280
Cow position: chr28:2083722-2083891 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 24, 93

Conread position: 112-280
Cow position: chr28:5114685-5114516 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 135
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 104, 0

Conread position: 112-280
Cow position: chr28:22233271-22233104 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 137
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 104, 59

Conread position: 112-281
Cow position: chr28:13490277-13490447 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 147
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 112-293
Cow position: chr28:1814741-1814559 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 104, 0

Conread position: 112-293
Cow position: chr28:9155153-9154977 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 147
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 104, 62

Conread position: 112-294
Cow position: chr28:8378695-8378878 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 104, 0

Conread position: 112-294
Cow position: chr28:17388608-17388791 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 104, 0

Conread position: 112-294
Cow position: chr28:34594105-34594288 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 104, 0

Conread position: 113-293
Cow position: chr28:13460097-13460278 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 143
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 103, 0

Conread position: 114-293
Cow position: chr28:7822386-7822568 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 146
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position: chr28:13440748-13440568 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 146
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position: chr28:14750676-14750857 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 102, 31

Conread position: 114-294
Cow position: chr28:3192663-3192482 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 102, 0

Conread position: 114-294
Cow position: chr28:4380716-4380535 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 114-294
Cow position: chr28:5937609-5937785 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 102, 84

Conread position: 114-331
Cow position: chr28:485434-485208 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 102, 0

Conread position: 114-385
Cow position: chr28:2846046-2845780 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 102, 176

Conread position: 115-290
Cow position: chr28:1953259-1953435 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 142
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 101, 0

Conread position: 121-265
Cow position: chr28:5565989-5566134 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 95, 0

Conread position: 121-293
Cow position: chr28:30805552-30805379 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 95, 0

Conread position: 123-287
Cow position: chr28:6539124-6538958 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 93, 0

Conread position: 146-293
Cow position: chr28:26426091-26425943 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 148-295
Cow position: chr28:24652952-24652806 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 125
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 68, 10

Conread position: 180-381
Cow position: chr28:11357519-11357320 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 162

Conread position: 212-665
Cow position: chr28:7817366-7817810 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 120

Conread position: 225-732
Cow position: chr28:10498087-10497604 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 38

Conread position: 237-671
Cow position: chr28:5764499-5764913 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 107

Conread position: 297-660
Cow position: chr28:28117808-28118172 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 31

Conread position: 352-603
Cow position: chr28:11357017-11356770 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 156, 12

Conread position: 383-727
Cow position: chr28:29092504-29092160 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 232
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 61, 29

Conread position: 443-719
Cow position: chr28:15586230-15586513 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 186
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 55

Conread position: 443-722
Cow position: chr28:10647262-10646985 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 45, 121

Conread position: 443-727
Cow position: chr28:14913642-14913922 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 196
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 133, 10

Conread position: 448-684
Cow position: chr28:24704363-24704602 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 187
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 44

Conread position: 453-722
Cow position: chr28:6656388-6656125 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 182
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 45

Conread position: 503-727
Cow position: chr28:10617638-10617425 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 5, 66

Conread position: 509-732
Cow position: chr28:2989048-2988830 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 161, 22

Conread position: 510-732
Cow position: chr28:32330510-32330293 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 154, 42

Conread position: 518-722
Cow position: chr28:8721152-8720950 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 48

Conread position: 545-732
Cow position: chr28:3020517-3020339 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 13, 74

Conread position: 546-732
Cow position: chr28:24652901-24652709 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 554-711
Cow position: chr28:14946870-14947026 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 133
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 81, 0

Conread position: 615-727
Cow position: chr28:2886608-2886718 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 619-732
Cow position: chr28:22260851-22260740 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 626-727
Cow position: chr28:32792073-32791974 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position: chr28:1167574-1167471 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position: chr28:1505171-1505276 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 626-732
Cow position: chr28:5113991-5113887 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position: chr28:5566452-5566556 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position: chr28:5937783-5937887 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position: chr28:7002297-7002401 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 626-732
Cow position: chr28:10581677-10581574 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position: chr28:17388789-17388894 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 626-732
Cow position: chr28:29820041-29820145 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position: chr28:33252619-33252723 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position: chr28:34594286-34594390 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 630-727
Cow position: chr28:2083905-2084000 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 630-732
Cow position: chr28:1814556-1814456 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 632-727
Cow position: chr28:17666987-17666892 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 5, 41

Show alignments to all cow chromosomes.