Cow genome map

Conread name: Ss1.1-Ova1-OVRM10012F06.5

Conread position: 92-357
Cow position: chr29:30811603-30811859 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 25

Conread position: 95-259
Cow position: chr29:10848015-10847852 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 141
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 121, 22

Conread position: 95-270
Cow position: chr29:17662981-17663155 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 107
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 22

Conread position: 95-271
Cow position: chr29:40502903-40502729 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 121, 19

Conread position: 95-287
Cow position: chr29:16770200-16770392 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position: chr29:48401-48206 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 95-293
Cow position: chr29:610535-610336 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 163
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position: chr29:669979-669781 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 159
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position: chr29:7431138-7430945 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 121, 14

Conread position: 95-293
Cow position: chr29:35296952-35297150 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 159
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position: chr29:2099922-2100120 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position: chr29:2466257-2466059 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 121, 24

Conread position: 95-294
Cow position: chr29:2689979-2690175 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position: chr29:5957681-5957879 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 156
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 121, 21

Conread position: 95-294
Cow position: chr29:11049356-11049553 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 24

Conread position: 95-294
Cow position: chr29:12796288-12796107 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 95-294
Cow position: chr29:14585999-14586197 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 158
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 119, 24

Conread position: 95-294
Cow position: chr29:25932467-25932269 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 156
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position: chr29:26164745-26164547 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position: chr29:35196744-35196939 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 156
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position: chr29:38227057-38227255 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 121, 21

Conread position: 95-294
Cow position: chr29:39079635-39079437 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position: chr29:43322637-43322829 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position: chr29:43365915-43365727 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 95-305
Cow position: chr29:2750335-2750135 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 167
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 121, 22

Conread position: 95-317
Cow position: chr29:410448-410227 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 121, 22

Conread position: 95-317
Cow position: chr29:23975917-23976138 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 121, 21

Conread position: 95-362
Cow position: chr29:1715319-1715583 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 118, 22

Conread position: 95-371
Cow position: chr29:104644-104911 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 14

Conread position: 95-385
Cow position: chr29:15950114-15949828 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 211
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 122, 24

Conread position: 96-293
Cow position: chr29:34799731-34799533 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 119, 19

Conread position: 97-293
Cow position: chr29:34925558-34925753 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 154
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 119, 12

Conread position: 97-316
Cow position: chr29:9643680-9643459 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 60, 20

Conread position: 110-316
Cow position: chr29:21426934-21426731 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 169
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 106, 125

Conread position: 112-262
Cow position: chr29:42650376-42650529 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 104, 0

Conread position: 112-262
Cow position: chr29:42802236-42802389 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 104, 0

Conread position: 112-286
Cow position: chr29:14013557-14013731 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 104, 27

Conread position: 112-286
Cow position: chr29:14072854-14072680 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 104, 27

Conread position: 112-293
Cow position: chr29:20251252-20251433 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 104, 59

Conread position: 112-294
Cow position: chr29:6266409-6266226 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 104, 0

Conread position: 112-294
Cow position: chr29:10823877-10823694 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 101, 0

Conread position: 112-294
Cow position: chr29:19623155-19622972 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 147
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 104, 0

Conread position: 112-294
Cow position: chr29:19653200-19653383 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 104, 0

Conread position: 112-294
Cow position: chr29:32539902-32540085 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 102, 0

Conread position: 112-317
Cow position: chr29:16022622-16022828 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 104, 0

Conread position: 112-332
Cow position: chr29:45587268-45587048 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 104, 208

Conread position: 112-366
Cow position: chr29:803260-803006 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 25, 11

Conread position: 112-386
Cow position: chr29:24709156-24708884 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 96, 30

Conread position: 113-294
Cow position: chr29:10648158-10647976 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 103, 0

Conread position: 113-294
Cow position: chr29:21543276-21543094 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 151
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 114-234
Cow position: chr29:32316135-32316256 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 102, 0

Conread position: 114-279
Cow position: chr29:15894756-15894590 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 102, 0

Conread position: 114-279
Cow position: chr29:19885164-19885330 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 136
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 100, 0

Conread position: 114-280
Cow position: chr29:18856850-18856683 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 135
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 102, 0

Conread position: 114-280
Cow position: chr29:27980823-27980658 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 102, 130

Conread position: 114-292
Cow position: chr29:45459807-45459989 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 102, 0

Conread position: 115-280
Cow position: chr29:7840892-7841057 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 136
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 101, 37

Conread position: 116-294
Cow position: chr29:2841277-2841098 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 147
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 100, 0

Conread position: 116-294
Cow position: chr29:27040673-27040497 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 149
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 100, 116

Conread position: 119-293
Cow position: chr29:13582171-13582344 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 97, 24

Conread position: 121-293
Cow position: chr29:31181516-31181691 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 95, 0

Conread position: 127-293
Cow position: chr29:27250235-27250068 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 89, 0

Conread position: 142-497
Cow position: chr29:5983082-5982734 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 18

Conread position: 152-732
Cow position: chr29:14086316-14085758 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 45

Conread position: 163-280
Cow position: chr29:15968718-15968600 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 213-420
Cow position: chr29:8331138-8330939 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 77, 0

Conread position: 217-375
Cow position: chr29:13648882-13649036 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 156, 73

Conread position: 304-459
Cow position: chr29:2749931-2749782 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 115, 0

Conread position: 410-732
Cow position: chr29:802876-802554 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 229
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 101, 16

Conread position: 442-731
Cow position: chr29:15949458-15949174 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 178, 50

Conread position: 443-677
Cow position: chr29:2951395-2951172 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 229, 64

Conread position: 486-719
Cow position: chr29:105159-105390 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 187
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 74

Conread position: 493-722
Cow position: chr29:9617427-9617659 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 21, 218

Conread position: 510-722
Cow position: chr29:31488174-31488394 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 122

Conread position: 528-732
Cow position: chr29:10823796-10823592 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 17

Conread position: 551-727
Cow position: chr29:9643570-9643386 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 117

Conread position: 626-727
Cow position: chr29:43322827-43322926 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position: chr29:410252-410149 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 626-732
Cow position: chr29:2100118-2100222 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position: chr29:2690173-2690277 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position: chr29:6266228-6266124 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position: chr29:10647978-10647874 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position: chr29:19653381-19653485 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position: chr29:23976113-23976217 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 626-732
Cow position: chr29:32540083-32540187 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position: chr29:39079439-39079334 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 630-727
Cow position: chr29:20251436-20251530 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 630-732
Cow position: chr29:7430942-7430842 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 630-732
Cow position: chr29:40502707-40502607 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 632-727
Cow position: chr29:21426754-21426658 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 632-727
Cow position: chr29:42650541-42650637 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 632-727
Cow position: chr29:42802401-42802497 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 632-732
Cow position: chr29:2841097-2840996 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 0

Show alignments to all cow chromosomes.