Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10012F06.5 |
| Conread position: | 77-523 |
| Cow position: | chr3:48231034-48230592 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 40 |
| Conread position: | 92-276 |
| Cow position: | chr3:23291415-23291231 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 105, 25 |
| Conread position: | 93-280 |
| Cow position: | chr3:30314559-30314745 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 123, 23 |
| Conread position: | 93-293 |
| Cow position: | chr3:3523014-3523215 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 123, 24 |
| Conread position: | 93-415 |
| Cow position: | chr3:2908365-2908054 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 21 |
| Conread position: | 95-207 |
| Cow position: | chr3:54864704-54864594 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 95-243 |
| Cow position: | chr3:5047189-5047042 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 119, 24 |
| Conread position: | 95-247 |
| Cow position: | chr3:50915299-50915452 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 46, 22 |
| Conread position: | 95-249 |
| Cow position: | chr3:15989040-15988879 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 67, 14 |
| Conread position: | 95-251 |
| Cow position: | chr3:18356892-18356737 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 115, 22 |
| Conread position: | 95-262 |
| Cow position: | chr3:5883534-5883700 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-269 |
| Cow position: | chr3:70083657-70083486 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 150 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-273 |
| Cow position: | chr3:40157510-40157334 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 153 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-274 |
| Cow position: | chr3:30929638-30929815 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 65, 15 |
| Conread position: | 95-278 |
| Cow position: | chr3:19878653-19878835 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 149 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-279 |
| Cow position: | chr3:56340432-56340249 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 121, 12 |
| Conread position: | 95-280 |
| Cow position: | chr3:42432226-42432410 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-280 |
| Cow position: | chr3:68873759-68873576 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 150 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-288 |
| Cow position: | chr3:5829633-5829442 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-288 |
| Cow position: | chr3:42579972-42579782 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 157 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-290 |
| Cow position: | chr3:66890966-66890774 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-293 |
| Cow position: | chr3:2917456-2917655 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 121, 14 |
| Conread position: | 95-293 |
| Cow position: | chr3:6782379-6782578 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-293 |
| Cow position: | chr3:7158737-7158539 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 160 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 121, 14 |
| Conread position: | 95-293 |
| Cow position: | chr3:14439766-14439567 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-293 |
| Cow position: | chr3:19938880-19939078 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 163 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-293 |
| Cow position: | chr3:32623040-32622843 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-293 |
| Cow position: | chr3:36864364-36864167 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-293 |
| Cow position: | chr3:41211742-41211543 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 119, 22 |
| Conread position: | 95-293 |
| Cow position: | chr3:46861308-46861109 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 121, 14 |
| Conread position: | 95-293 |
| Cow position: | chr3:49137545-49137348 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 121, 12 |
| Conread position: | 95-293 |
| Cow position: | chr3:49545212-49545015 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 121, 21 |
| Conread position: | 95-293 |
| Cow position: | chr3:64650620-64650820 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-293 |
| Cow position: | chr3:72630064-72630262 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 160 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 47, 22 |
| Conread position: | 95-293 |
| Cow position: | chr3:75041173-75040978 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-294 |
| Cow position: | chr3:207166-206968 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-294 |
| Cow position: | chr3:2633920-2634113 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 95-294 |
| Cow position: | chr3:2654101-2654295 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 163 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 53, 22 |
| Conread position: | 95-294 |
| Cow position: | chr3:18463592-18463396 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-294 |
| Cow position: | chr3:18542413-18542215 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 161 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-294 |
| Cow position: | chr3:18811498-18811693 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 159 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 119, 22 |
| Conread position: | 95-294 |
| Cow position: | chr3:19756964-19756766 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 156 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-294 |
| Cow position: | chr3:23214067-23213869 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-294 |
| Cow position: | chr3:31354270-31354072 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-294 |
| Cow position: | chr3:31897982-31897784 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-294 |
| Cow position: | chr3:36881927-36881729 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-294 |
| Cow position: | chr3:45895563-45895365 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 121, 12 |
| Conread position: | 95-294 |
| Cow position: | chr3:45974492-45974690 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 121, 12 |
| Conread position: | 95-294 |
| Cow position: | chr3:53515608-53515806 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-294 |
| Cow position: | chr3:55229707-55229508 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 17 |
| Conread position: | 95-294 |
| Cow position: | chr3:57484734-57484537 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 159 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-294 |
| Cow position: | chr3:64017369-64017172 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 157 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-294 |
| Cow position: | chr3:66119650-66119848 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 14 |
| Conread position: | 95-294 |
| Cow position: | chr3:69933389-69933587 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-294 |
| Cow position: | chr3:78027415-78027217 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 156 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-295 |
| Cow position: | chr3:472527-472726 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-311 |
| Cow position: | chr3:58947453-58947665 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 25 |
| Conread position: | 95-312 |
| Cow position: | chr3:50127885-50127670 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 102, 22 |
| Conread position: | 95-315 |
| Cow position: | chr3:47081663-47081445 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-317 |
| Cow position: | chr3:21182689-21182471 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-317 |
| Cow position: | chr3:36127386-36127609 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 120, 22 |
| Conread position: | 95-324 |
| Cow position: | chr3:5954191-5953961 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 119, 22 |
| Conread position: | 95-324 |
| Cow position: | chr3:26949509-26949735 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 121, 20 |
| Conread position: | 95-324 |
| Cow position: | chr3:34396086-34395860 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-325 |
| Cow position: | chr3:10239644-10239869 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 121, 24 |
| Conread position: | 95-332 |
| Cow position: | chr3:5995702-5995464 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 119, 22 |
| Conread position: | 95-332 |
| Cow position: | chr3:45869222-45868983 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 22 |
| Conread position: | 95-336 |
| Cow position: | chr3:2710966-2710726 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 155 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-357 |
| Cow position: | chr3:21305186-21304925 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 121, 14 |
| Conread position: | 95-366 |
| Cow position: | chr3:77442878-77443139 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-370 |
| Cow position: | chr3:14754302-14754030 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 21 |
| Conread position: | 95-371 |
| Cow position: | chr3:34093453-34093177 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 15 |
| Conread position: | 95-384 |
| Cow position: | chr3:3980385-3980670 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-385 |
| Cow position: | chr3:45775093-45774815 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 121, 15 |
| Conread position: | 95-473 |
| Cow position: | chr3:6685456-6685818 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 95-490 |
| Cow position: | chr3:19802654-19803037 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-732 |
| Cow position: | chr3:64358173-64357549 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 96-324 |
| Cow position: | chr3:51940424-51940202 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 120, 21 |
| Conread position: | 96-325 |
| Cow position: | chr3:66620170-66620388 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 120, 20 |
| Conread position: | 96-365 |
| Cow position: | chr3:42631010-42631276 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 120, 21 |
| Conread position: | 96-385 |
| Cow position: | chr3:4027267-4027557 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 23 |
| Conread position: | 96-732 |
| Cow position: | chr3:52864477-52863841 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 21 |
| Conread position: | 97-280 |
| Cow position: | chr3:24314465-24314648 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 119, 20 |
| Conread position: | 97-293 |
| Cow position: | chr3:7168790-7168986 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 119, 12 |
| Conread position: | 97-333 |
| Cow position: | chr3:15178309-15178540 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 184 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 97, 20 |
| Conread position: | 97-401 |
| Cow position: | chr3:39326713-39327015 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 23 |
| Conread position: | 100-342 |
| Cow position: | chr3:19890987-19890746 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 110, 17 |
| Conread position: | 108-280 |
| Cow position: | chr3:49613971-49613798 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 112-251 |
| Cow position: | chr3:40997982-40998123 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 112-262 |
| Cow position: | chr3:13518271-13518133 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 102, 37 |
| Conread position: | 112-264 |
| Cow position: | chr3:19944067-19944213 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 104, 37 |
| Conread position: | 112-280 |
| Cow position: | chr3:594585-594755 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 112-293 |
| Cow position: | chr3:40823397-40823579 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 146 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 112-293 |
| Cow position: | chr3:59861376-59861558 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 112-294 |
| Cow position: | chr3:34030889-34030706 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 149 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 112-294 |
| Cow position: | chr3:66638750-66638933 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 152 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 112-311 |
| Cow position: | chr3:77423691-77423882 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 188, 27 |
| Conread position: | 112-317 |
| Cow position: | chr3:48060822-48060616 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 112-324 |
| Cow position: | chr3:49677796-49678010 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 112-349 |
| Cow position: | chr3:26837752-26837519 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 31 |
| Conread position: | 112-357 |
| Cow position: | chr3:32842438-32842195 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 41, 89 |
| Conread position: | 112-362 |
| Cow position: | chr3:19722612-19722362 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 104, 41 |
| Conread position: | 112-377 |
| Cow position: | chr3:54783549-54783821 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 265 |
| Conread position: | 112-528 |
| Cow position: | chr3:29595204-29595617 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 214 |
| Conread position: | 112-530 |
| Cow position: | chr3:63004723-63004318 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 166 |
| Conread position: | 112-727 |
| Cow position: | chr3:24591612-24591034 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 46 |
| Conread position: | 112-732 |
| Cow position: | chr3:66990796-66991385 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 396, 100 |
| Conread position: | 113-294 |
| Cow position: | chr3:77474771-77474955 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 152 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 113-334 |
| Cow position: | chr3:9716825-9717047 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 199, 99 |
| Conread position: | 114-293 |
| Cow position: | chr3:18859428-18859608 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 102, 40 |
| Conread position: | 114-293 |
| Cow position: | chr3:22335900-22336082 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 150 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 114-293 |
| Cow position: | chr3:29331265-29331085 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 146 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 114-293 |
| Cow position: | chr3:45032753-45032935 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 150 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 114-293 |
| Cow position: | chr3:56321328-56321509 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 102, 49 |
| Conread position: | 114-293 |
| Cow position: | chr3:64028073-64027894 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 146 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 102, 9 |
| Conread position: | 114-293 |
| Cow position: | chr3:68699957-68699781 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 102, 45 |
| Conread position: | 114-319 |
| Cow position: | chr3:47179190-47178981 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 102, 9 |
| Conread position: | 114-342 |
| Cow position: | chr3:3054610-3054833 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 18 |
| Conread position: | 115-385 |
| Cow position: | chr3:36098706-36098434 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 24 |
| Conread position: | 122-461 |
| Cow position: | chr3:14632678-14632342 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 112 |
| Conread position: | 127-317 |
| Cow position: | chr3:26822484-26822291 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 159 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 89, 188 |
| Conread position: | 130-293 |
| Cow position: | chr3:36117691-36117855 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 132-294 |
| Cow position: | chr3:53713078-53713241 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 136 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 133-294 |
| Cow position: | chr3:7481201-7481039 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 143-293 |
| Cow position: | chr3:40340071-40339918 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 144-371 |
| Cow position: | chr3:56097567-56097787 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 215, 82 |
| Conread position: | 179-288 |
| Cow position: | chr3:37969124-37969234 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 191-336 |
| Cow position: | chr3:63241688-63241542 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 383-623 |
| Cow position: | chr3:6879064-6878824 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 172, 7 |
| Conread position: | 383-681 |
| Cow position: | chr3:36127744-36128049 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 100, 66 |
| Conread position: | 383-722 |
| Cow position: | chr3:15178671-15178984 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 383-722 |
| Cow position: | chr3:32842092-32841741 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 40, 24 |
| Conread position: | 383-732 |
| Cow position: | chr3:24643137-24643484 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 241 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 95, 29 |
| Conread position: | 383-732 |
| Cow position: | chr3:49272549-49272196 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 61, 90 |
| Conread position: | 383-732 |
| Cow position: | chr3:49333741-49334079 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 120, 52 |
| Conread position: | 411-731 |
| Cow position: | chr3:46015632-46015934 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 250, 72 |
| Conread position: | 434-731 |
| Cow position: | chr3:2907759-2907476 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 225 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 65, 32 |
| Conread position: | 443-732 |
| Cow position: | chr3:12680023-12679728 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 158, 54 |
| Conread position: | 455-719 |
| Cow position: | chr3:42631437-42631700 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 458-723 |
| Cow position: | chr3:50127693-50127424 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 162, 50 |
| Conread position: | 458-732 |
| Cow position: | chr3:58947643-58947920 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 206 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 64, 24 |
| Conread position: | 469-709 |
| Cow position: | chr3:54342315-54342082 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 166, 11 |
| Conread position: | 469-732 |
| Cow position: | chr3:6685836-6686104 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 487-713 |
| Cow position: | chr3:19691080-19690867 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 24, 52 |
| Conread position: | 498-727 |
| Cow position: | chr3:48230389-48230166 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 21, 7 |
| Conread position: | 511-732 |
| Cow position: | chr3:19722105-19721875 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 103, 47 |
| Conread position: | 546-727 |
| Cow position: | chr3:40157407-40157220 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 546-732 |
| Cow position: | chr3:5995598-5995407 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 28, 124 |
| Conread position: | 559-724 |
| Cow position: | chr3:26836636-26836481 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 568-727 |
| Cow position: | chr3:77423936-77424094 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 9, 38 |
| Conread position: | 584-723 |
| Cow position: | chr3:3981894-3982033 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 74 |
| Conread position: | 618-732 |
| Cow position: | chr3:7481048-7480938 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 625-732 |
| Cow position: | chr3:18542218-18542113 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 626-726 |
| Cow position: | chr3:78027219-78027121 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 626-732 |
| Cow position: | chr3:19756768-19756664 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 626-732 |
| Cow position: | chr3:48060641-48060536 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 51, 15 |
| Conread position: | 630-732 |
| Cow position: | chr3:49137345-49137244 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 632-727 |
| Cow position: | chr3:41000303-41000399 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 632-727 |
| Cow position: | chr3:46502727-46502823 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 632-732 |
| Cow position: | chr3:57484536-57484435 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 637-727 |
| Cow position: | chr3:66638940-66639031 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 80 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
Show alignments to all cow chromosomes.