Cow genome map
Conread name: | Ss1.1-Ova1-OVRM10012F06.5 |
Conread position: | 93-295 |
Cow position: | chr4:12241420-12241219 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 159 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 123, 24 |
Conread position: | 95-213 |
Cow position: | chr4:528793-528909 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 96 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 95-241 |
Cow position: | chr4:4905946-4906091 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 121 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-274 |
Cow position: | chr4:3961391-3961569 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 146 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-280 |
Cow position: | chr4:24445401-24445223 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 148 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 95-280 |
Cow position: | chr4:32211967-32212151 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 151 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-280 |
Cow position: | chr4:44724883-44725067 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 146 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 121, 14 |
Conread position: | 95-280 |
Cow position: | chr4:47717806-47717623 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 151 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-280 |
Cow position: | chr4:47764370-47764187 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 146 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-287 |
Cow position: | chr4:16056402-16056593 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 152 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 121, 10 |
Conread position: | 95-292 |
Cow position: | chr4:66925799-66925994 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 162 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-293 |
Cow position: | chr4:158315-158514 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 161 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-293 |
Cow position: | chr4:355710-355906 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 155 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-293 |
Cow position: | chr4:602793-602990 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 156 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 121, 12 |
Conread position: | 95-293 |
Cow position: | chr4:6268828-6268633 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 153 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-293 |
Cow position: | chr4:12587098-12587295 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 156 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-293 |
Cow position: | chr4:30307659-30307460 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 159 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 121, 17 |
Conread position: | 95-294 |
Cow position: | chr4:6490565-6490367 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 156 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-294 |
Cow position: | chr4:17926455-17926257 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 152 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-294 |
Cow position: | chr4:18516696-18516894 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 157 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 121, 17 |
Conread position: | 95-294 |
Cow position: | chr4:41331237-41331436 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 151 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-294 |
Cow position: | chr4:48026197-48026394 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 155 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-294 |
Cow position: | chr4:57979428-57979625 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 151 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 95-294 |
Cow position: | chr4:61256696-61256889 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 166 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-332 |
Cow position: | chr4:66179188-66178947 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-364 |
Cow position: | chr4:11384759-11385022 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-371 |
Cow position: | chr4:11393541-11393271 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 203 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-477 |
Cow position: | chr4:34185071-34184728 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 95-497 |
Cow position: | chr4:60264768-60264368 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 22 |
Conread position: | 95-528 |
Cow position: | chr4:21338204-21337778 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 22 |
Conread position: | 95-663 |
Cow position: | chr4:1464125-1463573 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 22 |
Conread position: | 95-732 |
Cow position: | chr4:28830828-28831439 (view UCSC Genome Browser custom track) |
Alignm length: | 641 |
Alignm identity: | 492 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 14 |
Conread position: | 95-732 |
Cow position: | chr4:46663992-46664615 (view UCSC Genome Browser custom track) |
Alignm length: | 649 |
Alignm identity: | 495 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 34 |
Conread position: | 96-294 |
Cow position: | chr4:11618654-11618848 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 167 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 20 |
Conread position: | 97-293 |
Cow position: | chr4:9587065-9587260 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 150 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 119, 12 |
Conread position: | 97-293 |
Cow position: | chr4:13547831-13548026 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 156 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 119, 12 |
Conread position: | 97-293 |
Cow position: | chr4:65223732-65223537 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 149 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 119, 12 |
Conread position: | 112-274 |
Cow position: | chr4:33073295-33073132 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 130 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 30, 41 |
Conread position: | 112-274 |
Cow position: | chr4:41119828-41119991 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 131 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 112-280 |
Cow position: | chr4:25599804-25599635 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 136 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 101, 0 |
Conread position: | 112-280 |
Cow position: | chr4:26887048-26886881 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 137 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 112-280 |
Cow position: | chr4:43880924-43881092 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 137 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 104, 27 |
Conread position: | 112-294 |
Cow position: | chr4:10408492-10408671 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 151 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 88, 40 |
Conread position: | 112-294 |
Cow position: | chr4:16359698-16359881 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 142 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 112-294 |
Cow position: | chr4:45049483-45049301 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 140 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 112-325 |
Cow position: | chr4:13492391-13492599 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 171 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 104, 51 |
Conread position: | 112-331 |
Cow position: | chr4:51044114-51043898 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 163 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 104, 46 |
Conread position: | 112-371 |
Cow position: | chr4:8598342-8598084 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 118 |
Conread position: | 113-294 |
Cow position: | chr4:43319830-43319649 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 144 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 103, 85 |
Conread position: | 114-280 |
Cow position: | chr4:4415899-4416066 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 137 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 114-293 |
Cow position: | chr4:1930807-1930625 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 150 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 114-293 |
Cow position: | chr4:5879982-5880164 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 153 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 114-293 |
Cow position: | chr4:9354954-9354774 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 142 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 114-293 |
Cow position: | chr4:18424708-18424526 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 145 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 115-293 |
Cow position: | chr4:101115-100934 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 148 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 101, 0 |
Conread position: | 116-294 |
Cow position: | chr4:36896188-36896365 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 129 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 100, 82 |
Conread position: | 120-293 |
Cow position: | chr4:3125618-3125794 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 144 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 121-294 |
Cow position: | chr4:31565481-31565306 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 136 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 129-280 |
Cow position: | chr4:27333267-27333419 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 125 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 136-293 |
Cow position: | chr4:41954312-41954473 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 127 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 142-293 |
Cow position: | chr4:41957973-41958128 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 124 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 146-293 |
Cow position: | chr4:18190255-18190404 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 121 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 70, 50 |
Conread position: | 149-319 |
Cow position: | chr4:33493677-33493847 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 124 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 150-293 |
Cow position: | chr4:31669122-31669268 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 111 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 204-359 |
Cow position: | chr4:27443479-27443635 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 117 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 12, 141 |
Conread position: | 268-500 |
Cow position: | chr4:54955720-54955950 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 176 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 97, 129 |
Conread position: | 390-592 |
Cow position: | chr4:14822022-14821825 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 146 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 122, 10 |
Conread position: | 442-621 |
Cow position: | chr4:21565311-21565492 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 133 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 69, 43 |
Conread position: | 443-718 |
Cow position: | chr4:14549809-14550073 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 188 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 172, 39 |
Conread position: | 477-732 |
Cow position: | chr4:34184665-34184421 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 188 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 32, 69 |
Conread position: | 497-723 |
Cow position: | chr4:60264295-60264074 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 177 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 11, 70 |
Conread position: | 584-722 |
Cow position: | chr4:14821600-14821459 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 112 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 34, 88 |
Conread position: | 619-732 |
Cow position: | chr4:26886871-26886762 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 94 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 626-727 |
Cow position: | chr4:12241222-12241123 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 85 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 626-727 |
Cow position: | chr4:36896363-36896462 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 86 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 626-732 |
Cow position: | chr4:6490369-6490265 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 90 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 626-732 |
Cow position: | chr4:43319651-43319547 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 89 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 626-732 |
Cow position: | chr4:45049303-45049199 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 89 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 627-732 |
Cow position: | chr4:43881105-43881208 (view UCSC Genome Browser custom track) |
Alignm length: | 106 |
Alignm identity: | 87 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 632-732 |
Cow position: | chr4:355908-356008 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 85 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 13, 33 |
Show alignments to all cow chromosomes.