Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10012F06.5 |
| Conread position: | 10-373 |
| Cow position: | chr5:53626948-53626601 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 27, 6 |
| Conread position: | 67-279 |
| Cow position: | chr5:23960451-23960238 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 89-360 |
| Cow position: | chr5:58334707-58334443 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 8, 29 |
| Conread position: | 90-289 |
| Cow position: | chr5:4019310-4019111 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 157 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 7, 16 |
| Conread position: | 92-281 |
| Cow position: | chr5:32733361-32733173 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 157 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 25 |
| Conread position: | 93-317 |
| Cow position: | chr5:64782126-64781903 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 123, 17 |
| Conread position: | 95-248 |
| Cow position: | chr5:17774146-17773994 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-258 |
| Cow position: | chr5:3504356-3504194 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 121, 12 |
| Conread position: | 95-260 |
| Cow position: | chr5:26089937-26089773 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 151, 18 |
| Conread position: | 95-269 |
| Cow position: | chr5:24330168-24330341 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 147 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 110, 22 |
| Conread position: | 95-279 |
| Cow position: | chr5:2430238-2430055 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 152 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 121, 14 |
| Conread position: | 95-279 |
| Cow position: | chr5:54932324-54932141 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 121, 14 |
| Conread position: | 95-287 |
| Cow position: | chr5:26769704-26769890 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-287 |
| Cow position: | chr5:27570007-27570197 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 14 |
| Conread position: | 95-290 |
| Cow position: | chr5:27652089-27651893 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 20 |
| Conread position: | 95-290 |
| Cow position: | chr5:58195896-58196090 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 155 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-293 |
| Cow position: | chr5:32772376-32772575 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 163 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 121, 12 |
| Conread position: | 95-293 |
| Cow position: | chr5:37732240-37732437 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 157 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-293 |
| Cow position: | chr5:45182209-45182010 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-293 |
| Cow position: | chr5:46775974-46776173 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 159 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-293 |
| Cow position: | chr5:73489667-73489470 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-294 |
| Cow position: | chr5:4068884-4069080 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 95-294 |
| Cow position: | chr5:9686534-9686335 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 159 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-294 |
| Cow position: | chr5:12644044-12643839 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 157, 22 |
| Conread position: | 95-294 |
| Cow position: | chr5:24098543-24098741 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-294 |
| Cow position: | chr5:28007094-28007282 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 120, 22 |
| Conread position: | 95-294 |
| Cow position: | chr5:29009249-29009445 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 22 |
| Conread position: | 95-294 |
| Cow position: | chr5:34696496-34696695 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 159 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-294 |
| Cow position: | chr5:39164906-39164708 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 22 |
| Conread position: | 95-294 |
| Cow position: | chr5:41551033-41550834 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 15 |
| Conread position: | 95-294 |
| Cow position: | chr5:45700160-45700358 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-294 |
| Cow position: | chr5:49119387-49119189 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 121, 8 |
| Conread position: | 95-294 |
| Cow position: | chr5:49182163-49182361 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-311 |
| Cow position: | chr5:57977153-57977363 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 174 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 122, 22 |
| Conread position: | 95-322 |
| Cow position: | chr5:46644581-46644806 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 178 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 121, 19 |
| Conread position: | 95-324 |
| Cow position: | chr5:32945768-32945999 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 22 |
| Conread position: | 95-325 |
| Cow position: | chr5:46738691-46738464 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 177 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-330 |
| Cow position: | chr5:27001504-27001737 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 121, 17 |
| Conread position: | 95-365 |
| Cow position: | chr5:41529697-41529428 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-366 |
| Cow position: | chr5:61019950-61019700 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 121, 14 |
| Conread position: | 95-370 |
| Cow position: | chr5:76123685-76123407 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-371 |
| Cow position: | chr5:25000750-25000482 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 47, 22 |
| Conread position: | 95-371 |
| Cow position: | chr5:27489141-27489416 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 24 |
| Conread position: | 95-375 |
| Cow position: | chr5:51162794-51163075 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 95-400 |
| Cow position: | chr5:29436075-29435758 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 45, 22 |
| Conread position: | 95-401 |
| Cow position: | chr5:49129115-49129417 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 121, 28 |
| Conread position: | 96-239 |
| Cow position: | chr5:5786712-5786570 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 120, 21 |
| Conread position: | 96-293 |
| Cow position: | chr5:30579217-30579413 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 120, 21 |
| Conread position: | 96-311 |
| Cow position: | chr5:32673848-32673633 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 21 |
| Conread position: | 96-332 |
| Cow position: | chr5:4385148-4385379 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 120, 21 |
| Conread position: | 96-332 |
| Cow position: | chr5:10918693-10918924 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 120, 13 |
| Conread position: | 96-488 |
| Cow position: | chr5:49593560-49593170 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 9 |
| Conread position: | 97-280 |
| Cow position: | chr5:29042408-29042589 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 44, 12 |
| Conread position: | 97-293 |
| Cow position: | chr5:2531167-2531364 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 160 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 44, 20 |
| Conread position: | 97-293 |
| Cow position: | chr5:24576811-24577006 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 119, 13 |
| Conread position: | 97-293 |
| Cow position: | chr5:44459379-44459574 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 119, 12 |
| Conread position: | 97-319 |
| Cow position: | chr5:10776368-10776141 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 119, 12 |
| Conread position: | 97-326 |
| Cow position: | chr5:28031373-28031605 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 181 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 119, 20 |
| Conread position: | 99-727 |
| Cow position: | chr5:46659613-46660227 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 17 |
| Conread position: | 100-253 |
| Cow position: | chr5:6158300-6158148 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 116, 108 |
| Conread position: | 101-366 |
| Cow position: | chr5:26068821-26068565 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 115, 18 |
| Conread position: | 109-293 |
| Cow position: | chr5:59482160-59482344 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 107, 77 |
| Conread position: | 109-294 |
| Cow position: | chr5:55627893-55628078 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 107, 81 |
| Conread position: | 112-206 |
| Cow position: | chr5:18653954-18654048 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 112-244 |
| Cow position: | chr5:1341884-1341756 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 104, 50 |
| Conread position: | 112-274 |
| Cow position: | chr5:48808806-48808643 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 112-293 |
| Cow position: | chr5:49518569-49518749 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 104, 16 |
| Conread position: | 112-294 |
| Cow position: | chr5:415813-415630 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 112-294 |
| Cow position: | chr5:2914360-2914540 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 112-294 |
| Cow position: | chr5:3785699-3785877 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 104, 89 |
| Conread position: | 112-369 |
| Cow position: | chr5:52433877-52434133 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 104, 27 |
| Conread position: | 112-370 |
| Cow position: | chr5:46630532-46630282 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 203 |
| Conread position: | 113-294 |
| Cow position: | chr5:57482636-57482454 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 113-311 |
| Cow position: | chr5:41962328-41962129 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 114-280 |
| Cow position: | chr5:14380074-14380240 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 102, 128 |
| Conread position: | 114-280 |
| Cow position: | chr5:46663914-46664081 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 114-292 |
| Cow position: | chr5:10843508-10843329 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 114-293 |
| Cow position: | chr5:6589110-6588927 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 149 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 114-293 |
| Cow position: | chr5:9042949-9043129 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 114-293 |
| Cow position: | chr5:27909361-27909179 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 114-293 |
| Cow position: | chr5:47831200-47831020 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 168, 102 |
| Conread position: | 114-293 |
| Cow position: | chr5:48468368-48468188 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 145 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 114-294 |
| Cow position: | chr5:34202846-34203027 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 150 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 114-295 |
| Cow position: | chr5:26079307-26079124 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 114-346 |
| Cow position: | chr5:3964375-3964591 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 116-294 |
| Cow position: | chr5:54792722-54792543 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 117-331 |
| Cow position: | chr5:18271522-18271735 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 95, 87 |
| Conread position: | 119-293 |
| Cow position: | chr5:59060533-59060711 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 119-371 |
| Cow position: | chr5:27682828-27682570 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 190 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 97, 80 |
| Conread position: | 121-252 |
| Cow position: | chr5:61273269-61273137 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 124-293 |
| Cow position: | chr5:31706495-31706667 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 129-385 |
| Cow position: | chr5:18117649-18117402 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 131-281 |
| Cow position: | chr5:25206763-25206605 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 26, 8 |
| Conread position: | 135-369 |
| Cow position: | chr5:23228163-23228392 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 81, 95 |
| Conread position: | 143-294 |
| Cow position: | chr5:20972105-20971954 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 131 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 149-385 |
| Cow position: | chr5:27059178-27058939 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 149-385 |
| Cow position: | chr5:27060081-27059842 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 160-293 |
| Cow position: | chr5:18665951-18666085 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 161-325 |
| Cow position: | chr5:6611969-6612136 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 163-264 |
| Cow position: | chr5:31101652-31101549 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 166-293 |
| Cow position: | chr5:35299817-35299946 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 50, 20 |
| Conread position: | 167-571 |
| Cow position: | chr5:40053423-40053804 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 62 |
| Conread position: | 172-280 |
| Cow position: | chr5:18122499-18122390 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 172-293 |
| Cow position: | chr5:10482817-10482939 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 181-373 |
| Cow position: | chr5:7502932-7502740 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 15, 22 |
| Conread position: | 183-385 |
| Cow position: | chr5:39247421-39247228 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 186-293 |
| Cow position: | chr5:56145038-56144930 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 191-294 |
| Cow position: | chr5:52805426-52805530 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 232-723 |
| Cow position: | chr5:61272828-61272364 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 22 |
| Conread position: | 323-731 |
| Cow position: | chr5:41962156-41961752 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 34 |
| Conread position: | 364-732 |
| Cow position: | chr5:23228493-23228860 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 14, 20 |
| Conread position: | 383-713 |
| Cow position: | chr5:18117318-18117009 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 125, 17 |
| Conread position: | 383-727 |
| Cow position: | chr5:39247141-39246824 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 114 |
| Conread position: | 383-732 |
| Cow position: | chr5:18272386-18272737 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 383-732 |
| Cow position: | chr5:25000380-25000029 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 40, 32 |
| Conread position: | 383-732 |
| Cow position: | chr5:27001894-27002227 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 383-732 |
| Cow position: | chr5:46630176-46629841 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 107 |
| Conread position: | 384-732 |
| Cow position: | chr5:29435710-29435379 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 29, 120 |
| Conread position: | 409-726 |
| Cow position: | chr5:41358205-41357902 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 11, 92 |
| Conread position: | 413-732 |
| Cow position: | chr5:41528879-41528566 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 66 |
| Conread position: | 443-722 |
| Cow position: | chr5:26068405-26068129 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 68, 49 |
| Conread position: | 443-727 |
| Cow position: | chr5:16103332-16103044 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 69, 41 |
| Conread position: | 449-714 |
| Cow position: | chr5:28023421-28023687 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 167, 84 |
| Conread position: | 483-721 |
| Cow position: | chr5:51164300-51164543 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 30, 235 |
| Conread position: | 512-727 |
| Cow position: | chr5:14785398-14785191 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 140, 46 |
| Conread position: | 612-727 |
| Cow position: | chr5:46738504-46738390 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 15 |
| Conread position: | 626-732 |
| Cow position: | chr5:2914538-2914642 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 626-732 |
| Cow position: | chr5:49119191-49119086 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 632-726 |
| Cow position: | chr5:415629-415534 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 81 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
Show alignments to all cow chromosomes.