Cow genome map

Conread name: Ss1.1-Ova1-OVRM10012F06.5

Conread position: 10-373
Cow position:
Alignm length: 368
Alignm identity: 246
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 6

Conread position: 67-279
Cow position:
Alignm length: 214
Alignm identity: 131
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 149, 0

Conread position: 89-360
Cow position:
Alignm length: 277
Alignm identity: 188
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 8, 29

Conread position: 90-289
Cow position:
Alignm length: 202
Alignm identity: 157
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 7, 16

Conread position: 92-281
Cow position:
Alignm length: 191
Alignm identity: 157
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 25

Conread position: 93-317
Cow position:
Alignm length: 226
Alignm identity: 171
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 123, 17

Conread position: 95-248
Cow position:
Alignm length: 155
Alignm identity: 129
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 121, 22

Conread position: 95-258
Cow position:
Alignm length: 165
Alignm identity: 131
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 121, 12

Conread position: 95-260
Cow position:
Alignm length: 167
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 151, 18

Conread position: 95-269
Cow position:
Alignm length: 177
Alignm identity: 147
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 110, 22

Conread position: 95-279
Cow position:
Alignm length: 186
Alignm identity: 152
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 121, 14

Conread position: 95-279
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 121, 14

Conread position: 95-287
Cow position:
Alignm length: 195
Alignm identity: 154
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 121, 22

Conread position: 95-287
Cow position:
Alignm length: 194
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 14

Conread position: 95-290
Cow position:
Alignm length: 198
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 20

Conread position: 95-290
Cow position:
Alignm length: 197
Alignm identity: 155
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position:
Alignm length: 202
Alignm identity: 163
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 121, 12

Conread position: 95-293
Cow position:
Alignm length: 200
Alignm identity: 157
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position:
Alignm length: 202
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position:
Alignm length: 202
Alignm identity: 159
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position:
Alignm length: 200
Alignm identity: 152
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position:
Alignm length: 200
Alignm identity: 149
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 22, 0

Conread position: 95-294
Cow position:
Alignm length: 202
Alignm identity: 159
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position:
Alignm length: 211
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 157, 22

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 152
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 120, 22

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 22

Conread position: 95-294
Cow position:
Alignm length: 202
Alignm identity: 159
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 22

Conread position: 95-294
Cow position:
Alignm length: 202
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 15

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 154
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 121, 8

Conread position: 95-294
Cow position:
Alignm length: 202
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-311
Cow position:
Alignm length: 219
Alignm identity: 174
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 122, 22

Conread position: 95-322
Cow position:
Alignm length: 230
Alignm identity: 178
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 121, 19

Conread position: 95-324
Cow position:
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 22

Conread position: 95-325
Cow position:
Alignm length: 232
Alignm identity: 177
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 121, 22

Conread position: 95-330
Cow position:
Alignm length: 240
Alignm identity: 174
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 121, 17

Conread position: 95-365
Cow position:
Alignm length: 276
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-366
Cow position:
Alignm length: 273
Alignm identity: 189
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 121, 14

Conread position: 95-370
Cow position:
Alignm length: 287
Alignm identity: 205
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 121, 22

Conread position: 95-371
Cow position:
Alignm length: 279
Alignm identity: 207
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 22

Conread position: 95-371
Cow position:
Alignm length: 280
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 24

Conread position: 95-375
Cow position:
Alignm length: 287
Alignm identity: 202
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 121, 22

Conread position: 95-400
Cow position:
Alignm length: 324
Alignm identity: 225
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 45, 22

Conread position: 95-401
Cow position:
Alignm length: 308
Alignm identity: 199
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 121, 28

Conread position: 96-239
Cow position:
Alignm length: 145
Alignm identity: 117
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 120, 21

Conread position: 96-293
Cow position:
Alignm length: 199
Alignm identity: 151
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 120, 21

Conread position: 96-311
Cow position:
Alignm length: 220
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 21

Conread position: 96-332
Cow position:
Alignm length: 241
Alignm identity: 173
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 120, 21

Conread position: 96-332
Cow position:
Alignm length: 239
Alignm identity: 181
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 120, 13

Conread position: 96-488
Cow position:
Alignm length: 394
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 9

Conread position: 97-280
Cow position:
Alignm length: 186
Alignm identity: 148
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 44, 12

Conread position: 97-293
Cow position:
Alignm length: 201
Alignm identity: 160
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 44, 20

Conread position: 97-293
Cow position:
Alignm length: 198
Alignm identity: 151
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 119, 13

Conread position: 97-293
Cow position:
Alignm length: 198
Alignm identity: 148
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 119, 12

Conread position: 97-319
Cow position:
Alignm length: 230
Alignm identity: 177
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 119, 12

Conread position: 97-326
Cow position:
Alignm length: 236
Alignm identity: 181
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 119, 20

Conread position: 99-727
Cow position:
Alignm length: 637
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 17

Conread position: 100-253
Cow position:
Alignm length: 155
Alignm identity: 119
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 116, 108

Conread position: 101-366
Cow position:
Alignm length: 268
Alignm identity: 188
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 115, 18

Conread position: 109-293
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 107, 77

Conread position: 109-294
Cow position:
Alignm length: 187
Alignm identity: 145
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 107, 81

Conread position: 112-206
Cow position:
Alignm length: 95
Alignm identity: 81
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 112-244
Cow position:
Alignm length: 134
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 104, 50

Conread position: 112-274
Cow position:
Alignm length: 164
Alignm identity: 131
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 102, 0

Conread position: 112-293
Cow position:
Alignm length: 183
Alignm identity: 144
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 104, 16

Conread position: 112-294
Cow position:
Alignm length: 184
Alignm identity: 140
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 104, 0

Conread position: 112-294
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 104, 0

Conread position: 112-294
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 104, 89

Conread position: 112-369
Cow position:
Alignm length: 261
Alignm identity: 184
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 104, 27

Conread position: 112-370
Cow position:
Alignm length: 260
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 203

Conread position: 113-294
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 103, 0

Conread position: 113-311
Cow position:
Alignm length: 200
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 114-280
Cow position:
Alignm length: 168
Alignm identity: 133
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 102, 128

Conread position: 114-280
Cow position:
Alignm length: 168
Alignm identity: 136
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 100, 0

Conread position: 114-292
Cow position:
Alignm length: 180
Alignm identity: 139
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 99, 0

Conread position: 114-293
Cow position:
Alignm length: 184
Alignm identity: 149
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 85, 0

Conread position: 114-293
Cow position:
Alignm length: 181
Alignm identity: 138
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position:
Alignm length: 183
Alignm identity: 145
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position:
Alignm length: 182
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 168, 102

Conread position: 114-293
Cow position:
Alignm length: 181
Alignm identity: 145
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 102, 0

Conread position: 114-294
Cow position:
Alignm length: 182
Alignm identity: 150
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 102, 0

Conread position: 114-295
Cow position:
Alignm length: 184
Alignm identity: 144
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 102, 0

Conread position: 114-346
Cow position:
Alignm length: 233
Alignm identity: 165
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 100, 0

Conread position: 116-294
Cow position:
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 100, 0

Conread position: 117-331
Cow position:
Alignm length: 217
Alignm identity: 160
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 95, 87

Conread position: 119-293
Cow position:
Alignm length: 179
Alignm identity: 142
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 22, 0

Conread position: 119-371
Cow position:
Alignm length: 260
Alignm identity: 190
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 97, 80

Conread position: 121-252
Cow position:
Alignm length: 133
Alignm identity: 111
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 95, 0

Conread position: 124-293
Cow position:
Alignm length: 173
Alignm identity: 141
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 92, 0

Conread position: 129-385
Cow position:
Alignm length: 257
Alignm identity: 177
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 87, 0

Conread position: 131-281
Cow position:
Alignm length: 160
Alignm identity: 128
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 26, 8

Conread position: 135-369
Cow position:
Alignm length: 237
Alignm identity: 173
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 81, 95

Conread position: 143-294
Cow position:
Alignm length: 152
Alignm identity: 131
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 149-385
Cow position:
Alignm length: 240
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 149-385
Cow position:
Alignm length: 240
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 160-293
Cow position:
Alignm length: 135
Alignm identity: 108
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 161-325
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 163-264
Cow position:
Alignm length: 104
Alignm identity: 89
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 166-293
Cow position:
Alignm length: 131
Alignm identity: 108
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 20

Conread position: 167-571
Cow position:
Alignm length: 408
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 62

Conread position: 172-280
Cow position:
Alignm length: 110
Alignm identity: 91
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 172-293
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 181-373
Cow position:
Alignm length: 194
Alignm identity: 136
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 15, 22

Conread position: 183-385
Cow position:
Alignm length: 203
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 186-293
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 191-294
Cow position:
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 232-723
Cow position:
Alignm length: 497
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 22

Conread position: 323-731
Cow position:
Alignm length: 422
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 34

Conread position: 364-732
Cow position:
Alignm length: 382
Alignm identity: 263
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 14, 20

Conread position: 383-713
Cow position:
Alignm length: 332
Alignm identity: 225
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 125, 17

Conread position: 383-727
Cow position:
Alignm length: 346
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 114

Conread position: 383-732
Cow position:
Alignm length: 362
Alignm identity: 243
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 13, 34

Conread position: 383-732
Cow position:
Alignm length: 359
Alignm identity: 238
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 40, 32

Conread position: 383-732
Cow position:
Alignm length: 350
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 383-732
Cow position:
Alignm length: 352
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 107

Conread position: 384-732
Cow position:
Alignm length: 353
Alignm identity: 239
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 29, 120

Conread position: 409-726
Cow position:
Alignm length: 320
Alignm identity: 209
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 11, 92

Conread position: 413-732
Cow position:
Alignm length: 321
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 66

Conread position: 443-722
Cow position:
Alignm length: 288
Alignm identity: 205
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 68, 49

Conread position: 443-727
Cow position:
Alignm length: 292
Alignm identity: 193
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 69, 41

Conread position: 449-714
Cow position:
Alignm length: 272
Alignm identity: 178
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 167, 84

Conread position: 483-721
Cow position:
Alignm length: 246
Alignm identity: 171
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 30, 235

Conread position: 512-727
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 140, 46

Conread position: 612-727
Cow position:
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 15

Conread position: 626-732
Cow position:
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position:
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 632-726
Cow position:
Alignm length: 96
Alignm identity: 81
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 13, 0

Show alignments to all cow chromosomes.