Cow genome map

Conread name: Ss1.1-Ova1-OVRM10012F06.5

Conread position: 90-292
Cow position:
Alignm length: 206
Alignm identity: 164
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 6, 28

Conread position: 91-267
Cow position:
Alignm length: 178
Alignm identity: 144
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 125, 26

Conread position: 92-467
Cow position:
Alignm length: 377
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 25

Conread position: 93-349
Cow position:
Alignm length: 266
Alignm identity: 198
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 105, 24

Conread position: 95-214
Cow position:
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 95-262
Cow position:
Alignm length: 170
Alignm identity: 135
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 71, 22

Conread position: 95-264
Cow position:
Alignm length: 174
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 19

Conread position: 95-271
Cow position:
Alignm length: 178
Alignm identity: 139
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 121, 14

Conread position: 95-274
Cow position:
Alignm length: 181
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 121, 21

Conread position: 95-274
Cow position:
Alignm length: 186
Alignm identity: 146
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 22

Conread position: 95-279
Cow position:
Alignm length: 186
Alignm identity: 150
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 121, 22

Conread position: 95-280
Cow position:
Alignm length: 186
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 95-280
Cow position:
Alignm length: 187
Alignm identity: 155
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-280
Cow position:
Alignm length: 187
Alignm identity: 148
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 121, 22

Conread position: 95-280
Cow position:
Alignm length: 187
Alignm identity: 148
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 121, 22

Conread position: 95-280
Cow position:
Alignm length: 187
Alignm identity: 153
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 117, 22

Conread position: 95-284
Cow position:
Alignm length: 192
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 121, 19

Conread position: 95-288
Cow position:
Alignm length: 196
Alignm identity: 149
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position:
Alignm length: 202
Alignm identity: 159
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position:
Alignm length: 202
Alignm identity: 160
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position:
Alignm length: 200
Alignm identity: 155
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 121, 0

Conread position: 95-293
Cow position:
Alignm length: 206
Alignm identity: 160
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 103, 14

Conread position: 95-293
Cow position:
Alignm length: 202
Alignm identity: 158
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 121, 14

Conread position: 95-293
Cow position:
Alignm length: 200
Alignm identity: 149
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position:
Alignm length: 202
Alignm identity: 162
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position:
Alignm length: 202
Alignm identity: 157
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 121, 14

Conread position: 95-293
Cow position:
Alignm length: 202
Alignm identity: 160
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 121, 14

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 156
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 121, 12

Conread position: 95-294
Cow position:
Alignm length: 205
Alignm identity: 156
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 21, 0

Conread position: 95-294
Cow position:
Alignm length: 200
Alignm identity: 150
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 22, 0

Conread position: 95-294
Cow position:
Alignm length: 203
Alignm identity: 159
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 121, 10

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 150
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 121, 24

Conread position: 95-294
Cow position:
Alignm length: 213
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 55, 22

Conread position: 95-294
Cow position:
Alignm length: 204
Alignm identity: 154
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 25, 47

Conread position: 95-294
Cow position:
Alignm length: 205
Alignm identity: 158
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 72, 10

Conread position: 95-294
Cow position:
Alignm length: 217
Alignm identity: 157
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 47, 22

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 151
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 157
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 121, 22

Conread position: 95-295
Cow position:
Alignm length: 202
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 19

Conread position: 95-301
Cow position:
Alignm length: 210
Alignm identity: 160
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 47, 18

Conread position: 95-317
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 121, 22

Conread position: 95-324
Cow position:
Alignm length: 233
Alignm identity: 165
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 121, 21

Conread position: 95-325
Cow position:
Alignm length: 232
Alignm identity: 170
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 121, 22

Conread position: 95-332
Cow position:
Alignm length: 240
Alignm identity: 169
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 208, 12

Conread position: 95-359
Cow position:
Alignm length: 268
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 10

Conread position: 95-360
Cow position:
Alignm length: 267
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 28

Conread position: 95-371
Cow position:
Alignm length: 278
Alignm identity: 201
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 121, 22

Conread position: 96-362
Cow position:
Alignm length: 268
Alignm identity: 181
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 120, 21

Conread position: 96-365
Cow position:
Alignm length: 277
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 11

Conread position: 96-366
Cow position:
Alignm length: 271
Alignm identity: 186
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 96-371
Cow position:
Alignm length: 289
Alignm identity: 193
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 21

Conread position: 97-293
Cow position:
Alignm length: 198
Alignm identity: 149
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 119, 12

Conread position: 97-293
Cow position:
Alignm length: 200
Alignm identity: 162
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 119, 20

Conread position: 97-365
Cow position:
Alignm length: 270
Alignm identity: 195
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 119, 20

Conread position: 97-727
Cow position:
Alignm length: 642
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 20

Conread position: 99-323
Cow position:
Alignm length: 226
Alignm identity: 172
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 117, 18

Conread position: 100-325
Cow position:
Alignm length: 232
Alignm identity: 159
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 13, 35

Conread position: 111-702
Cow position:
Alignm length: 593
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 212

Conread position: 112-234
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 104, 0

Conread position: 112-242
Cow position:
Alignm length: 132
Alignm identity: 109
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 104, 0

Conread position: 112-274
Cow position:
Alignm length: 164
Alignm identity: 134
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 104, 12

Conread position: 112-293
Cow position:
Alignm length: 183
Alignm identity: 143
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 104, 0

Conread position: 112-294
Cow position:
Alignm length: 184
Alignm identity: 143
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 104, 70

Conread position: 112-294
Cow position:
Alignm length: 184
Alignm identity: 141
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 104, 0

Conread position: 113-243
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 103, 0

Conread position: 113-293
Cow position:
Alignm length: 184
Alignm identity: 148
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 103, 0

Conread position: 114-280
Cow position:
Alignm length: 168
Alignm identity: 133
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 100, 0

Conread position: 114-280
Cow position:
Alignm length: 168
Alignm identity: 136
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position:
Alignm length: 183
Alignm identity: 152
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 102, 58

Conread position: 114-293
Cow position:
Alignm length: 183
Alignm identity: 149
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position:
Alignm length: 183
Alignm identity: 145
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 102, 29

Conread position: 114-293
Cow position:
Alignm length: 183
Alignm identity: 143
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 102, 132

Conread position: 114-294
Cow position:
Alignm length: 182
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 102, 0

Conread position: 114-316
Cow position:
Alignm length: 209
Alignm identity: 159
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 27, 0

Conread position: 114-319
Cow position:
Alignm length: 213
Alignm identity: 162
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 102, 0

Conread position: 114-319
Cow position:
Alignm length: 213
Alignm identity: 162
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 102, 0

Conread position: 114-385
Cow position:
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 21

Conread position: 115-325
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 101, 10

Conread position: 115-592
Cow position:
Alignm length: 481
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 19

Conread position: 116-274
Cow position:
Alignm length: 160
Alignm identity: 128
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 100, 0

Conread position: 116-294
Cow position:
Alignm length: 180
Alignm identity: 141
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 100, 0

Conread position: 118-293
Cow position:
Alignm length: 179
Alignm identity: 141
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 98, 0

Conread position: 120-290
Cow position:
Alignm length: 173
Alignm identity: 144
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 96, 43

Conread position: 127-313
Cow position:
Alignm length: 188
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 103

Conread position: 130-399
Cow position:
Alignm length: 272
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 63

Conread position: 135-293
Cow position:
Alignm length: 162
Alignm identity: 132
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 81, 8

Conread position: 135-398
Cow position:
Alignm length: 267
Alignm identity: 182
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 218, 81

Conread position: 135-443
Cow position:
Alignm length: 310
Alignm identity: 203
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 93

Conread position: 141-324
Cow position:
Alignm length: 188
Alignm identity: 145
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 75, 0

Conread position: 141-326
Cow position:
Alignm length: 194
Alignm identity: 145
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 75, 31

Conread position: 151-325
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 65, 153

Conread position: 153-251
Cow position:
Alignm length: 100
Alignm identity: 85
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 158-274
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 58, 16

Conread position: 163-293
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 163-293
Cow position:
Alignm length: 132
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 163-294
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 166-293
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 108

Conread position: 166-294
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 182-293
Cow position:
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 183-306
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 25

Conread position: 329-731
Cow position:
Alignm length: 412
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 52

Conread position: 349-714
Cow position:
Alignm length: 372
Alignm identity: 238
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 19

Conread position: 383-705
Cow position:
Alignm length: 338
Alignm identity: 230
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 36, 69

Conread position: 383-719
Cow position:
Alignm length: 347
Alignm identity: 222
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 29

Conread position: 383-719
Cow position:
Alignm length: 339
Alignm identity: 221
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 32

Conread position: 383-719
Cow position:
Alignm length: 352
Alignm identity: 229
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 63

Conread position: 383-732
Cow position:
Alignm length: 355
Alignm identity: 237
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 181, 36

Conread position: 383-732
Cow position:
Alignm length: 351
Alignm identity: 251
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 125, 108

Conread position: 422-732
Cow position:
Alignm length: 325
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 179

Conread position: 456-732
Cow position:
Alignm length: 287
Alignm identity: 208
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 18, 64

Conread position: 485-727
Cow position:
Alignm length: 243
Alignm identity: 165
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 518-727
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 99, 48

Conread position: 563-732
Cow position:
Alignm length: 172
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 24

Conread position: 609-732
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 611-732
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 626-717
Cow position:
Alignm length: 92
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 626-732
Cow position:
Alignm length: 107
Alignm identity: 92
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position:
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 626-732
Cow position:
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 626-732
Cow position:
Alignm length: 108
Alignm identity: 91
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 19, 40

Conread position: 626-732
Cow position:
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 629-723
Cow position:
Alignm length: 95
Alignm identity: 82
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 631-727
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 35

Conread position: 632-727
Cow position:
Alignm length: 98
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 632-728
Cow position:
Alignm length: 97
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 634-732
Cow position:
Alignm length: 100
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 68, 24

Conread position: 636-732
Cow position:
Alignm length: 97
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 637-728
Cow position:
Alignm length: 93
Alignm identity: 82
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 637-732
Cow position:
Alignm length: 96
Alignm identity: 81
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.