Cow genome map

Conread name: Ss1.1-Ova1-OVRM10012F06.5

Conread position: 34-314
Cow position:
Alignm length: 293
Alignm identity: 209
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 10, 91

Conread position: 48-294
Cow position:
Alignm length: 249
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 168

Conread position: 92-294
Cow position:
Alignm length: 205
Alignm identity: 158
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 123, 25

Conread position: 93-294
Cow position:
Alignm length: 203
Alignm identity: 160
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 123, 24

Conread position: 95-222
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 121, 22

Conread position: 95-234
Cow position:
Alignm length: 143
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 72, 22

Conread position: 95-249
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 121, 21

Conread position: 95-250
Cow position:
Alignm length: 157
Alignm identity: 127
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 121, 14

Conread position: 95-260
Cow position:
Alignm length: 168
Alignm identity: 132
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 71, 22

Conread position: 95-274
Cow position:
Alignm length: 181
Alignm identity: 142
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 118, 22

Conread position: 95-280
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 95-280
Cow position:
Alignm length: 188
Alignm identity: 153
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 119, 22

Conread position: 95-280
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 121, 15

Conread position: 95-280
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 121, 22

Conread position: 95-281
Cow position:
Alignm length: 188
Alignm identity: 152
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 121, 22

Conread position: 95-281
Cow position:
Alignm length: 188
Alignm identity: 153
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 121, 22

Conread position: 95-288
Cow position:
Alignm length: 195
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-288
Cow position:
Alignm length: 195
Alignm identity: 160
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 122, 22

Conread position: 95-293
Cow position:
Alignm length: 202
Alignm identity: 157
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position:
Alignm length: 200
Alignm identity: 157
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position:
Alignm length: 200
Alignm identity: 156
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 121, 14

Conread position: 95-293
Cow position:
Alignm length: 200
Alignm identity: 151
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 119, 22

Conread position: 95-293
Cow position:
Alignm length: 200
Alignm identity: 157
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position:
Alignm length: 200
Alignm identity: 154
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position:
Alignm length: 200
Alignm identity: 158
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position:
Alignm length: 200
Alignm identity: 156
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 156
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position:
Alignm length: 202
Alignm identity: 153
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 110, 22

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 151
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 153
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 12, 0

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 152
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 121, 21

Conread position: 95-294
Cow position:
Alignm length: 200
Alignm identity: 155
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 22, 0

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 151
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 42, 22

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 165
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 155
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 121, 18

Conread position: 95-294
Cow position:
Alignm length: 201
Alignm identity: 157
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 121, 18

Conread position: 95-295
Cow position:
Alignm length: 202
Alignm identity: 161
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 121, 14

Conread position: 95-327
Cow position:
Alignm length: 235
Alignm identity: 172
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 36, 22

Conread position: 95-327
Cow position:
Alignm length: 236
Alignm identity: 172
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 121, 22

Conread position: 95-331
Cow position:
Alignm length: 246
Alignm identity: 168
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 22

Conread position: 95-332
Cow position:
Alignm length: 245
Alignm identity: 188
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 121, 17

Conread position: 95-332
Cow position:
Alignm length: 242
Alignm identity: 187
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 217, 22

Conread position: 95-332
Cow position:
Alignm length: 239
Alignm identity: 179
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 121, 21

Conread position: 95-338
Cow position:
Alignm length: 250
Alignm identity: 167
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 121, 10

Conread position: 95-357
Cow position:
Alignm length: 265
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 22

Conread position: 95-363
Cow position:
Alignm length: 270
Alignm identity: 180
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 121, 22

Conread position: 95-365
Cow position:
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 22

Conread position: 95-371
Cow position:
Alignm length: 278
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 22

Conread position: 95-385
Cow position:
Alignm length: 292
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 22

Conread position: 95-387
Cow position:
Alignm length: 297
Alignm identity: 212
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 126, 22

Conread position: 95-724
Cow position:
Alignm length: 633
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-732
Cow position:
Alignm length: 650
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 22

Conread position: 96-287
Cow position:
Alignm length: 194
Alignm identity: 159
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 120, 14

Conread position: 96-293
Cow position:
Alignm length: 199
Alignm identity: 156
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 120, 21

Conread position: 96-293
Cow position:
Alignm length: 199
Alignm identity: 149
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 120, 21

Conread position: 96-314
Cow position:
Alignm length: 223
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 21

Conread position: 97-293
Cow position:
Alignm length: 198
Alignm identity: 148
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 119, 12

Conread position: 97-293
Cow position:
Alignm length: 198
Alignm identity: 150
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 119, 12

Conread position: 97-293
Cow position:
Alignm length: 198
Alignm identity: 149
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 119, 12

Conread position: 97-293
Cow position:
Alignm length: 198
Alignm identity: 149
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 119, 12

Conread position: 99-385
Cow position:
Alignm length: 294
Alignm identity: 202
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 41, 18

Conread position: 106-294
Cow position:
Alignm length: 190
Alignm identity: 150
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 110, 134

Conread position: 109-250
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 107, 0

Conread position: 112-261
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 104, 92

Conread position: 112-262
Cow position:
Alignm length: 153
Alignm identity: 126
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 24, 0

Conread position: 112-280
Cow position:
Alignm length: 170
Alignm identity: 139
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 104, 0

Conread position: 112-281
Cow position:
Alignm length: 171
Alignm identity: 141
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 104, 42

Conread position: 112-293
Cow position:
Alignm length: 183
Alignm identity: 149
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 104, 0

Conread position: 112-294
Cow position:
Alignm length: 186
Alignm identity: 147
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 19, 86

Conread position: 112-294
Cow position:
Alignm length: 185
Alignm identity: 145
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 22, 0

Conread position: 112-316
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 104, 179

Conread position: 112-332
Cow position:
Alignm length: 223
Alignm identity: 163
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 102, 208

Conread position: 112-332
Cow position:
Alignm length: 228
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 97

Conread position: 114-287
Cow position:
Alignm length: 175
Alignm identity: 142
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 102, 0

Conread position: 114-287
Cow position:
Alignm length: 176
Alignm identity: 146
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position:
Alignm length: 183
Alignm identity: 141
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position:
Alignm length: 183
Alignm identity: 146
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position:
Alignm length: 183
Alignm identity: 150
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position:
Alignm length: 181
Alignm identity: 141
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position:
Alignm length: 181
Alignm identity: 145
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 102, 28

Conread position: 114-293
Cow position:
Alignm length: 181
Alignm identity: 145
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 102, 21

Conread position: 114-294
Cow position:
Alignm length: 182
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 102, 0

Conread position: 118-279
Cow position:
Alignm length: 163
Alignm identity: 134
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 98, 0

Conread position: 118-294
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 98, 0

Conread position: 119-239
Cow position:
Alignm length: 122
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 119-293
Cow position:
Alignm length: 179
Alignm identity: 146
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 10, 0

Conread position: 119-293
Cow position:
Alignm length: 178
Alignm identity: 145
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 97, 133

Conread position: 120-363
Cow position:
Alignm length: 248
Alignm identity: 164
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 99, 78

Conread position: 127-366
Cow position:
Alignm length: 242
Alignm identity: 176
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 89, 15

Conread position: 129-293
Cow position:
Alignm length: 169
Alignm identity: 100
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 130-274
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 86, 0

Conread position: 145-280
Cow position:
Alignm length: 137
Alignm identity: 111
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 71, 0

Conread position: 149-370
Cow position:
Alignm length: 223
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 173

Conread position: 205-385
Cow position:
Alignm length: 182
Alignm identity: 148
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 11, 86

Conread position: 246-469
Cow position:
Alignm length: 225
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 44

Conread position: 372-732
Cow position:
Alignm length: 363
Alignm identity: 238
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 262, 11

Conread position: 383-713
Cow position:
Alignm length: 339
Alignm identity: 229
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 177, 100

Conread position: 383-727
Cow position:
Alignm length: 358
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 18

Conread position: 383-727
Cow position:
Alignm length: 357
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 18

Conread position: 383-732
Cow position:
Alignm length: 358
Alignm identity: 233
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 68, 29

Conread position: 383-732
Cow position:
Alignm length: 352
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 50

Conread position: 390-562
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 118, 91

Conread position: 409-693
Cow position:
Alignm length: 291
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 70

Conread position: 409-727
Cow position:
Alignm length: 328
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 219

Conread position: 443-726
Cow position:
Alignm length: 295
Alignm identity: 212
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 63, 91

Conread position: 450-691
Cow position:
Alignm length: 244
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 120

Conread position: 469-732
Cow position:
Alignm length: 269
Alignm identity: 178
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 134, 44

Conread position: 472-713
Cow position:
Alignm length: 250
Alignm identity: 183
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 27, 85

Conread position: 477-616
Cow position:
Alignm length: 144
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 479-698
Cow position:
Alignm length: 223
Alignm identity: 168
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 30, 81

Conread position: 481-727
Cow position:
Alignm length: 260
Alignm identity: 173
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 144

Conread position: 492-732
Cow position:
Alignm length: 242
Alignm identity: 179
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 24, 82

Conread position: 514-732
Cow position:
Alignm length: 231
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 157

Conread position: 518-731
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 94, 45

Conread position: 626-732
Cow position:
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position:
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 626-732
Cow position:
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position:
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 630-732
Cow position:
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 631-732
Cow position:
Alignm length: 102
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 632-727
Cow position:
Alignm length: 97
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Show alignments to all cow chromosomes.