Cow genome map

Conread name: Ss1.1-Ova1-OVRM10012F06.5

Conread position: 90-287
Cow position: chrX:26505050-26505247 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 27

Conread position: 90-288
Cow position: chrX:21602745-21602942 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 27

Conread position: 92-294
Cow position: chrX:23041255-23041054 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 124, 13

Conread position: 93-293
Cow position: chrX:15598799-15598998 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 123, 23

Conread position: 93-294
Cow position: chrX:27494577-27494779 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 164
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 16

Conread position: 93-294
Cow position: chrX:29950704-29950511 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 93-386
Cow position: chrX:21270327-21270041 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 69, 18

Conread position: 95-199
Cow position: chrX:11668571-11668469 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 95-243
Cow position: chrX:21794966-21795113 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 121, 22

Conread position: 95-250
Cow position: chrX:2859930-2859776 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 121, 22

Conread position: 95-250
Cow position: chrX:5395091-5394937 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 129
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 121, 22

Conread position: 95-250
Cow position: chrX:26400596-26400444 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 95-251
Cow position: chrX:32095095-32094937 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 94, 22

Conread position: 95-254
Cow position: chrX:5834093-5833935 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 138
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 121, 22

Conread position: 95-261
Cow position: chrX:12997711-12997543 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 41, 15

Conread position: 95-261
Cow position: chrX:21829395-21829560 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 134
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 121, 22

Conread position: 95-267
Cow position: chrX:13413245-13413074 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 143
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 121, 22

Conread position: 95-274
Cow position: chrX:23391728-23391550 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 121, 10

Conread position: 95-279
Cow position: chrX:27989913-27989727 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 82

Conread position: 95-279
Cow position: chrX:29872688-29872511 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 46, 12

Conread position: 95-280
Cow position: chrX:11465131-11464947 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 121, 22

Conread position: 95-280
Cow position: chrX:23455707-23455523 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 121, 22

Conread position: 95-280
Cow position: chrX:24089273-24089457 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 148
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 121, 22

Conread position: 95-280
Cow position: chrX:30179123-30178940 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 121, 14

Conread position: 95-280
Cow position: chrX:39564060-39563876 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 154
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-287
Cow position: chrX:16461548-16461733 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 157
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 187, 22

Conread position: 95-287
Cow position: chrX:22778183-22778375 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 160
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 121, 22

Conread position: 95-288
Cow position: chrX:6873200-6873010 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 123, 22

Conread position: 95-288
Cow position: chrX:16812722-16812531 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 187, 22

Conread position: 95-288
Cow position: chrX:17631953-17631766 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 118, 22

Conread position: 95-288
Cow position: chrX:21632716-21632524 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-288
Cow position: chrX:22582829-22582636 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 21

Conread position: 95-288
Cow position: chrX:26628161-26627969 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-289
Cow position: chrX:22814253-22814447 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 154
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 121, 22

Conread position: 95-290
Cow position: chrX:22525733-22525539 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 154
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 121, 14

Conread position: 95-292
Cow position: chrX:35017679-35017877 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 95-292
Cow position: chrX:40057194-40056998 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 22

Conread position: 95-293
Cow position: chrX:1833699-1833897 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 160
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 121, 10

Conread position: 95-293
Cow position: chrX:2101730-2101929 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 162
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position: chrX:2603920-2604118 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 161
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 49, 22

Conread position: 95-293
Cow position: chrX:7030060-7030256 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 156
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position: chrX:8670463-8670659 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position: chrX:10531687-10531488 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 121, 12

Conread position: 95-293
Cow position: chrX:12280398-12280200 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position: chrX:12353111-12353310 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 160
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position: chrX:14787001-14786802 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position: chrX:16275548-16275747 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 46, 22

Conread position: 95-293
Cow position: chrX:16363253-16363056 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position: chrX:17478653-17478454 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 46, 22

Conread position: 95-293
Cow position: chrX:18659911-18659715 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 158
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position: chrX:20316184-20315985 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 159
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 119, 12

Conread position: 95-293
Cow position: chrX:27426445-27426250 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 187, 22

Conread position: 95-293
Cow position: chrX:28758770-28758571 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 121, 22

Conread position: 95-293
Cow position: chrX:31493292-31493490 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 161
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 119, 14

Conread position: 95-293
Cow position: chrX:37848885-37849084 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 162
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position: chrX:6909459-6909277 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 156
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position: chrX:12669994-12669795 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 161
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 46, 22

Conread position: 95-294
Cow position: chrX:13006754-13006556 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 22

Conread position: 95-294
Cow position: chrX:16699171-16699369 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position: chrX:21222799-21222997 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 158
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 121, 12

Conread position: 95-294
Cow position: chrX:22488052-22488250 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 156
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 121, 10

Conread position: 95-294
Cow position: chrX:26758734-26758536 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 121, 12

Conread position: 95-294
Cow position: chrX:30056513-30056714 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 0

Conread position: 95-294
Cow position: chrX:30232237-30232039 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 121, 14

Conread position: 95-294
Cow position: chrX:30711224-30711418 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 47, 14

Conread position: 95-294
Cow position: chrX:32467123-32467321 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 156
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 121, 22

Conread position: 95-294
Cow position: chrX:35529731-35529933 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 160
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 121, 12

Conread position: 95-301
Cow position: chrX:18954651-18954449 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 121, 22

Conread position: 95-316
Cow position: chrX:8586965-8587189 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 121, 22

Conread position: 95-316
Cow position: chrX:31187374-31187149 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 176
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 121, 22

Conread position: 95-317
Cow position: chrX:30184023-30183802 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 121, 22

Conread position: 95-324
Cow position: chrX:5840204-5840431 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 122, 15

Conread position: 95-332
Cow position: chrX:22619438-22619201 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 185
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 121, 21

Conread position: 95-336
Cow position: chrX:39719309-39719557 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 21

Conread position: 95-366
Cow position: chrX:24139155-24138886 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 121, 22

Conread position: 95-371
Cow position: chrX:2143151-2143426 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 22

Conread position: 95-385
Cow position: chrX:13052503-13052785 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 20

Conread position: 95-387
Cow position: chrX:17668419-17668142 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 22

Conread position: 95-388
Cow position: chrX:40247443-40247161 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 210
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 121, 22

Conread position: 95-394
Cow position: chrX:29998663-29998955 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 203
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 217, 22

Conread position: 95-415
Cow position: chrX:35021136-35021453 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 16

Conread position: 95-477
Cow position: chrX:31724897-31725277 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 22

Conread position: 96-280
Cow position: chrX:17050965-17051150 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 45, 21

Conread position: 96-280
Cow position: chrX:26767326-26767143 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 120, 21

Conread position: 96-288
Cow position: chrX:24122048-24121857 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 21

Conread position: 96-293
Cow position: chrX:1546807-1547003 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 156
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 120, 21

Conread position: 96-293
Cow position: chrX:7093470-7093668 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 156
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 117, 21

Conread position: 96-294
Cow position: chrX:20803998-20804196 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 20

Conread position: 96-294
Cow position: chrX:28603586-28603390 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 159
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 119, 15

Conread position: 96-294
Cow position: chrX:30044273-30044076 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 21

Conread position: 96-362
Cow position: chrX:20698423-20698162 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 21

Conread position: 96-385
Cow position: chrX:18532868-18533148 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 104, 21

Conread position: 96-470
Cow position: chrX:30142522-30142161 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 21

Conread position: 97-269
Cow position: chrX:11663632-11663461 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 119, 12

Conread position: 97-288
Cow position: chrX:9125232-9125422 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 150
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 119, 13

Conread position: 97-293
Cow position: chrX:982511-982706 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 154
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 119, 20

Conread position: 97-293
Cow position: chrX:18219270-18219467 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 161
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 119, 20

Conread position: 97-293
Cow position: chrX:39521780-39521975 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 119, 12

Conread position: 97-293
Cow position: chrX:41411148-41410953 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 119, 12

Conread position: 97-294
Cow position: chrX:29285290-29285485 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 155
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 119, 12

Conread position: 97-295
Cow position: chrX:24275543-24275740 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 19

Conread position: 100-401
Cow position: chrX:30369143-30368841 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 42

Conread position: 100-416
Cow position: chrX:44386352-44386660 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 17

Conread position: 100-478
Cow position: chrX:16017267-16016873 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 13

Conread position: 101-333
Cow position: chrX:34988774-34989004 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 114, 16

Conread position: 104-274
Cow position: chrX:5299345-5299174 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 112, 0

Conread position: 109-273
Cow position: chrX:29882347-29882182 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 109-279
Cow position: chrX:29947590-29947761 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 141
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 107, 0

Conread position: 109-293
Cow position: chrX:11433584-11433769 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 107, 0

Conread position: 109-385
Cow position: chrX:22130797-22130518 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 91, 175

Conread position: 111-294
Cow position: chrX:6275733-6275548 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 112-224
Cow position: chrX:21490115-21490228 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 104, 0

Conread position: 112-244
Cow position: chrX:38575937-38575800 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 115
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 112-256
Cow position: chrX:29853680-29853535 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 121
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 104, 0

Conread position: 112-273
Cow position: chrX:23276908-23277070 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 135
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 104, 0

Conread position: 112-287
Cow position: chrX:21289605-21289428 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 153
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 112-290
Cow position: chrX:2482752-2482573 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 100, 0

Conread position: 112-293
Cow position: chrX:12478604-12478788 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 30, 84

Conread position: 112-293
Cow position: chrX:15127356-15127174 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 104, 0

Conread position: 112-293
Cow position: chrX:26527862-26528044 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 104, 0

Conread position: 112-293
Cow position: chrX:28634530-28634346 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 152
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 104, 0

Conread position: 112-294
Cow position: chrX:320354-320536 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 104, 163

Conread position: 112-294
Cow position: chrX:23019210-23019393 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 128

Conread position: 112-294
Cow position: chrX:24484526-24484344 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 104, 91

Conread position: 112-294
Cow position: chrX:29794228-29794047 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 149
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 104, 119

Conread position: 112-294
Cow position: chrX:38146191-38146374 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 104, 0

Conread position: 112-316
Cow position: chrX:970652-970860 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 30, 0

Conread position: 112-327
Cow position: chrX:24114301-24114086 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 104, 143

Conread position: 112-365
Cow position: chrX:29758046-29758292 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 153

Conread position: 112-385
Cow position: chrX:12973343-12973072 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 119

Conread position: 112-385
Cow position: chrX:28549751-28550024 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 174

Conread position: 112-712
Cow position: chrX:6283208-6282595 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 176

Conread position: 112-727
Cow position: chrX:2536894-2536288 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 373, 167

Conread position: 114-267
Cow position: chrX:3421574-3421422 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 136, 0

Conread position: 114-278
Cow position: chrX:12803976-12803811 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 137
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 102, 0

Conread position: 114-279
Cow position: chrX:7751788-7751954 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 102, 0

Conread position: 114-279
Cow position: chrX:13076809-13076643 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 136
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 102, 0

Conread position: 114-279
Cow position: chrX:13097383-13097217 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 136
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 102, 0

Conread position: 114-279
Cow position: chrX:15179543-15179377 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 139
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 102, 0

Conread position: 114-280
Cow position: chrX:2562969-2562802 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 102, 0

Conread position: 114-280
Cow position: chrX:9008226-9008393 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 135
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 100, 0

Conread position: 114-280
Cow position: chrX:28562326-28562159 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position: chrX:1943156-1942974 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 150
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position: chrX:5283846-5283667 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 102, 9

Conread position: 114-293
Cow position: chrX:5323835-5323653 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 100, 0

Conread position: 114-293
Cow position: chrX:5863286-5863468 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 148
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 102, 143

Conread position: 114-293
Cow position: chrX:8454640-8454820 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position: chrX:9192756-9192576 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position: chrX:12654867-12654690 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 146
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 102, 33

Conread position: 114-293
Cow position: chrX:21304638-21304458 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 102, 0

Conread position: 114-293
Cow position: chrX:21340288-21340474 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 114-293
Cow position: chrX:23047034-23047212 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 99, 111

Conread position: 114-293
Cow position: chrX:28584868-28585050 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 146
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 27, 21

Conread position: 114-293
Cow position: chrX:30173782-30173601 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 147
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 102, 58

Conread position: 114-293
Cow position: chrX:37812050-37812232 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 148
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 102, 0

Conread position: 114-294
Cow position: chrX:37142702-37142521 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 154
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 115-293
Cow position: chrX:7481492-7481671 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 101, 0

Conread position: 115-295
Cow position: chrX:29096092-29096270 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 100, 83

Conread position: 116-292
Cow position: chrX:30010929-30011106 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 144
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 100, 0

Conread position: 116-294
Cow position: chrX:24136509-24136336 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 147
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 100, 64

Conread position: 118-227
Cow position: chrX:37757877-37757985 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 98, 21

Conread position: 119-264
Cow position: chrX:14594652-14594794 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 95, 13

Conread position: 119-280
Cow position: chrX:13398227-13398065 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 133
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 97, 0

Conread position: 119-280
Cow position: chrX:20360158-20359996 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 135
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 97, 0

Conread position: 135-293
Cow position: chrX:30055828-30055668 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 131
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 6, 0

Conread position: 142-281
Cow position: chrX:41851483-41851343 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 120
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 74, 0

Conread position: 148-294
Cow position: chrX:4795811-4795960 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 151-295
Cow position: chrX:30990016-30990166 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 125
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 152-679
Cow position: chrX:21587117-21587647 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 176

Conread position: 156-293
Cow position: chrX:29884910-29885051 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 176-280
Cow position: chrX:3376158-3376053 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 93
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 182-293
Cow position: chrX:12342912-12343026 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 295-715
Cow position: chrX:26427908-26427493 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 265
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 9, 24

Conread position: 348-495
Cow position: chrX:27959858-27960005 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 383-674
Cow position: chrX:18611180-18611460 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 128, 18

Conread position: 383-703
Cow position: chrX:22130441-22130108 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 232
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 95, 196

Conread position: 383-719
Cow position: chrX:13417589-13417270 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 222
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 32

Conread position: 383-727
Cow position: chrX:17668058-17667734 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 390-705
Cow position: chrX:13052865-13053169 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 121, 11

Conread position: 414-726
Cow position: chrX:24112968-24112665 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 204
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 30, 20

Conread position: 426-727
Cow position: chrX:10417441-10417138 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 191
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 190, 90

Conread position: 428-724
Cow position: chrX:20697220-20696936 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 60, 133

Conread position: 443-722
Cow position: chrX:6015192-6014912 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 186
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 72

Conread position: 450-654
Cow position: chrX:30132518-30132316 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 460-727
Cow position: chrX:44387034-44387287 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 23

Conread position: 465-717
Cow position: chrX:30367254-30367006 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 76

Conread position: 482-731
Cow position: chrX:16016759-16016504 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 11, 87

Conread position: 483-684
Cow position: chrX:27960470-27960670 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 16

Conread position: 484-719
Cow position: chrX:31081897-31082125 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 154, 24

Conread position: 484-727
Cow position: chrX:40246953-40246715 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 129, 33

Conread position: 507-694
Cow position: chrX:31726057-31726248 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 108, 51

Conread position: 510-712
Cow position: chrX:30004115-30004314 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 120, 42

Conread position: 528-732
Cow position: chrX:26767231-26767027 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 11

Conread position: 546-730
Cow position: chrX:40057090-40056906 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 28, 90

Conread position: 546-732
Cow position: chrX:28634441-28634252 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 68

Conread position: 600-732
Cow position: chrX:13413097-13412969 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 26

Conread position: 606-732
Cow position: chrX:5299175-5299053 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 610-732
Cow position: chrX:29285488-29285609 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 619-719
Cow position: chrX:22814466-22814564 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 625-726
Cow position: chrX:16699366-16699465 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 626-727
Cow position: chrX:22778379-22778479 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 15

Conread position: 626-727
Cow position: chrX:30711416-30711513 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position: chrX:18954458-18954354 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 626-732
Cow position: chrX:21829591-21829695 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 18, 0

Conread position: 627-732
Cow position: chrX:2482569-2482466 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 627-732
Cow position: chrX:23391531-23391428 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 630-732
Cow position: chrX:26528047-26528146 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 632-732
Cow position: chrX:23277090-23277190 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 33

Conread position: 634-727
Cow position: chrX:5283669-5283576 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 637-727
Cow position: chrX:28603383-28603292 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 81
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 0

Show alignments to all cow chromosomes.