Cow genome map

Conread name: Ss1.1-Ova1-OVRM10064H02.5

Conread position: 30-202
Cow position: chr11:11785288-11785465 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 10

Conread position: 30-236
Cow position: chr11:50953614-50953392 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 42-202
Cow position: chr11:14941643-14941478 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 8

Conread position: 42-202
Cow position: chr11:20491534-20491699 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 77

Conread position: 42-260
Cow position: chr11:69402287-69402070 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 29, 170

Conread position: 43-197
Cow position: chr11:34946109-34945944 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 43-202
Cow position: chr11:5648708-5648871 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 26, 104

Conread position: 43-202
Cow position: chr11:31422693-31422863 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 43-207
Cow position: chr11:24243758-24243932 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 43-211
Cow position: chr11:38845299-38845121 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 6

Conread position: 43-230
Cow position: chr11:40275638-40275436 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 26, 8

Conread position: 43-230
Cow position: chr11:40279130-40278928 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 26, 8

Conread position: 43-230
Cow position: chr11:52832755-52832561 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 25, 8

Conread position: 43-230
Cow position: chr11:67236364-67236559 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 26, 193

Conread position: 43-236
Cow position: chr11:8828666-8828460 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 35

Conread position: 43-257
Cow position: chr11:84795786-84795560 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 43-324
Cow position: chr11:17151638-17151922 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 196
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 200

Conread position: 44-206
Cow position: chr11:50951520-50951691 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 44-229
Cow position: chr11:696382-696186 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 24, 186

Conread position: 44-229
Cow position: chr11:32438988-32438788 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 23, 118

Conread position: 44-270
Cow position: chr11:67871639-67871398 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 45-202
Cow position: chr11:7683931-7684089 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 102, 26

Conread position: 45-230
Cow position: chr11:63508379-63508575 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 21, 194

Conread position: 45-244
Cow position: chr11:19259549-19259332 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 49-230
Cow position: chr11:19606286-19606477 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 49-230
Cow position: chr11:30210877-30211069 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 190

Conread position: 50-231
Cow position: chr11:65988197-65988387 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 61-230
Cow position: chr11:42519724-42519897 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 27

Conread position: 63-206
Cow position: chr11:34136489-34136638 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 63-226
Cow position: chr11:64904986-64905154 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 61, 147

Conread position: 65-225
Cow position: chr11:18913158-18913319 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 30

Conread position: 69-211
Cow position: chr11:61427588-61427734 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 66, 56

Conread position: 69-224
Cow position: chr11:60985283-60985123 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 69-229
Cow position: chr11:19501963-19502132 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 71, 52

Conread position: 69-229
Cow position: chr11:44609559-44609724 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 71, 43

Conread position: 69-231
Cow position: chr11:9055955-9056123 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 69-253
Cow position: chr11:41272131-41272325 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 56, 183

Conread position: 75-230
Cow position: chr11:43646412-43646245 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 77-219
Cow position: chr11:77008044-77008190 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 12

Conread position: 77-254
Cow position: chr11:47193517-47193705 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 62, 21

Conread position: 78-225
Cow position: chr11:54244677-54244833 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 39

Conread position: 79-230
Cow position: chr11:40269590-40269433 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 45, 19

Conread position: 79-255
Cow position: chr11:5188133-5188314 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 68, 153

Conread position: 81-248
Cow position: chr11:373139-372958 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 8, 0

Show alignments to all cow chromosomes.