Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10064H02.5 |
| Conread position: | 38-327 |
| Cow position: | chr17:10769488-10769196 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 87, 26 |
| Conread position: | 42-202 |
| Cow position: | chr17:10220871-10221039 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 27, 15 |
| Conread position: | 42-230 |
| Cow position: | chr17:31798430-31798226 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 86 |
| Conread position: | 42-235 |
| Cow position: | chr17:13229398-13229605 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 43-189 |
| Cow position: | chr17:8926193-8926042 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 122 |
| Conread position: | 43-200 |
| Cow position: | chr17:19891644-19891812 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 26, 132 |
| Conread position: | 43-202 |
| Cow position: | chr17:38139529-38139698 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 43-223 |
| Cow position: | chr17:30236217-30236406 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 43-228 |
| Cow position: | chr17:8279685-8279494 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 43-229 |
| Cow position: | chr17:26614708-26614512 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 28 |
| Conread position: | 43-230 |
| Cow position: | chr17:2271020-2271219 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 26, 129 |
| Conread position: | 43-230 |
| Cow position: | chr17:36400122-36400320 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 61 |
| Conread position: | 43-231 |
| Cow position: | chr17:144155-143956 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 66 |
| Conread position: | 43-231 |
| Cow position: | chr17:18887746-18887558 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 27, 102 |
| Conread position: | 43-237 |
| Cow position: | chr17:37138783-37138983 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 43-326 |
| Cow position: | chr17:27505117-27505413 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 61 |
| Conread position: | 44-197 |
| Cow position: | chr17:21373698-21373859 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 58 |
| Conread position: | 44-230 |
| Cow position: | chr17:36173951-36173744 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 46-223 |
| Cow position: | chr17:13716011-13715819 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 46-237 |
| Cow position: | chr17:24880767-24880969 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 194 |
| Conread position: | 53-219 |
| Cow position: | chr17:7595184-7595355 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 32, 18 |
| Conread position: | 69-225 |
| Cow position: | chr17:27819347-27819509 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 70-201 |
| Cow position: | chr17:36818093-36818225 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 114, 100 |
| Conread position: | 70-230 |
| Cow position: | chr17:8215245-8215411 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 66, 98 |
| Conread position: | 76-230 |
| Cow position: | chr17:11655436-11655601 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 77-202 |
| Cow position: | chr17:10314481-10314611 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 78-211 |
| Cow position: | chr17:8093908-8094045 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 84-214 |
| Cow position: | chr17:37043349-37043216 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 6, 0 |
Show alignments to all cow chromosomes.