Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10064H02.5 |
| Conread position: | 42-254 |
| Cow position: | chr24:19754531-19754749 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 116 |
| Conread position: | 43-199 |
| Cow position: | chr24:7079748-7079904 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 81, 21 |
| Conread position: | 43-202 |
| Cow position: | chr24:2143710-2143874 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 27, 7 |
| Conread position: | 43-202 |
| Cow position: | chr24:15617514-15617350 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 43-214 |
| Cow position: | chr24:39681811-39681985 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 27, 161 |
| Conread position: | 43-219 |
| Cow position: | chr24:26455798-26455988 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 8 |
| Conread position: | 43-226 |
| Cow position: | chr24:35827693-35827886 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 126 |
| Conread position: | 43-227 |
| Cow position: | chr24:6507811-6507615 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 43-231 |
| Cow position: | chr24:23176742-23176543 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 23, 181 |
| Conread position: | 43-235 |
| Cow position: | chr24:34369051-34368844 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 131 |
| Conread position: | 43-238 |
| Cow position: | chr24:33290358-33290152 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 8 |
| Conread position: | 43-251 |
| Cow position: | chr24:28279580-28279801 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 28, 196 |
| Conread position: | 43-251 |
| Cow position: | chr24:39742771-39742989 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 196 |
| Conread position: | 43-252 |
| Cow position: | chr24:18786961-18786747 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 26 |
| Conread position: | 44-230 |
| Cow position: | chr24:39350259-39350067 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 105 |
| Conread position: | 46-231 |
| Cow position: | chr24:43359794-43359982 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 56 |
| Conread position: | 50-202 |
| Cow position: | chr24:25677994-25678149 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 18, 45 |
| Conread position: | 65-230 |
| Cow position: | chr24:44074471-44074301 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 73, 37 |
| Conread position: | 67-230 |
| Cow position: | chr24:27054396-27054564 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 55, 166 |
| Conread position: | 69-198 |
| Cow position: | chr24:12452772-12452905 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 56 |
| Conread position: | 69-202 |
| Cow position: | chr24:16055524-16055386 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 69-230 |
| Cow position: | chr24:6427692-6427861 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 75-225 |
| Cow position: | chr24:14617654-14617811 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 64, 89 |
| Conread position: | 77-230 |
| Cow position: | chr24:38291855-38292013 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 86-225 |
| Cow position: | chr24:42916377-42916235 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
Show alignments to all cow chromosomes.