Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10064H02.5 |
| Conread position: | 28-206 |
| Cow position: | chr25:41094172-41093986 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 42, 14 |
| Conread position: | 42-189 |
| Cow position: | chr25:22909880-22909728 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 25, 114 |
| Conread position: | 42-235 |
| Cow position: | chr25:36501259-36501057 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 36, 27 |
| Conread position: | 43-202 |
| Cow position: | chr25:13560234-13560067 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 93 |
| Conread position: | 43-202 |
| Cow position: | chr25:26240517-26240686 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 27, 8 |
| Conread position: | 43-230 |
| Cow position: | chr25:14570352-14570546 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 28 |
| Conread position: | 43-230 |
| Cow position: | chr25:24405756-24405553 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 43-246 |
| Cow position: | chr25:40957007-40956792 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 27, 210 |
| Conread position: | 45-206 |
| Cow position: | chr25:27534938-27534767 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 24, 10 |
| Conread position: | 45-230 |
| Cow position: | chr25:33111988-33111806 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 22, 137 |
| Conread position: | 53-202 |
| Cow position: | chr25:20885091-20884941 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 30, 18 |
| Conread position: | 55-206 |
| Cow position: | chr25:18161285-18161434 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 122, 9 |
| Conread position: | 69-214 |
| Cow position: | chr25:5365538-5365696 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 69-225 |
| Cow position: | chr25:13321191-13321353 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 69-230 |
| Cow position: | chr25:12932635-12932805 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 100 |
| Conread position: | 69-230 |
| Cow position: | chr25:18448822-18448990 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 67 |
| Conread position: | 70-206 |
| Cow position: | chr25:14075314-14075454 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 71, 98 |
| Conread position: | 75-230 |
| Cow position: | chr25:26457662-26457497 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 77-224 |
| Cow position: | chr25:10748483-10748333 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 127 |
| Conread position: | 78-202 |
| Cow position: | chr25:8080746-8080873 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 61, 23 |
| Conread position: | 79-231 |
| Cow position: | chr25:27534666-27534516 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 80-202 |
| Cow position: | chr25:20614745-20614870 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 82-230 |
| Cow position: | chr25:9109364-9109519 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 83-225 |
| Cow position: | chr25:33222666-33222807 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 58 |
| Conread position: | 84-230 |
| Cow position: | chr25:24136417-24136265 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 86-225 |
| Cow position: | chr25:18228204-18228351 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 54, 12 |
Show alignments to all cow chromosomes.