Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10064H02.5 |
| Conread position: | 43-202 |
| Cow position: | chr28:3769680-3769516 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 23, 71 |
| Conread position: | 43-202 |
| Cow position: | chr28:8335946-8336116 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 43-206 |
| Cow position: | chr28:15677870-15678045 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 43-224 |
| Cow position: | chr28:5979907-5980098 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 43-237 |
| Cow position: | chr28:20275114-20275319 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 15, 80 |
| Conread position: | 43-246 |
| Cow position: | chr28:20963545-20963323 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 43-257 |
| Cow position: | chr28:33285126-33284899 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 44-202 |
| Cow position: | chr28:25340258-25340424 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 25, 60 |
| Conread position: | 44-228 |
| Cow position: | chr28:7540172-7539984 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 23, 129 |
| Conread position: | 44-230 |
| Cow position: | chr28:31165997-31165794 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 44-233 |
| Cow position: | chr28:15081935-15081736 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 44-251 |
| Cow position: | chr28:1202255-1202036 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 45-231 |
| Cow position: | chr28:6643296-6643092 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 45-231 |
| Cow position: | chr28:19253469-19253666 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 50-231 |
| Cow position: | chr28:4763878-4764065 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 89, 19 |
| Conread position: | 50-231 |
| Cow position: | chr28:23668784-23668597 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 64-227 |
| Cow position: | chr28:22421973-22421808 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 75, 11 |
| Conread position: | 69-225 |
| Cow position: | chr28:11181146-11180983 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 69-230 |
| Cow position: | chr28:25825846-25825678 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 66, 36 |
| Conread position: | 69-239 |
| Cow position: | chr28:7805406-7805228 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 72-211 |
| Cow position: | chr28:11007220-11007367 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 76-230 |
| Cow position: | chr28:15406084-15406241 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 66, 91 |
| Conread position: | 80-201 |
| Cow position: | chr28:28640889-28641009 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 44, 9 |
| Conread position: | 83-230 |
| Cow position: | chr28:22331088-22331238 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 56, 29 |
| Conread position: | 86-231 |
| Cow position: | chr28:3823106-3822952 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 98-230 |
| Cow position: | chr28:27987920-27988053 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 40, 73 |
Show alignments to all cow chromosomes.