Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10064H02.5 |
| Conread position: | 31-202 |
| Cow position: | chr29:22895692-22895875 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 42-233 |
| Cow position: | chr29:18695229-18695427 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 23, 131 |
| Conread position: | 43-200 |
| Cow position: | chr29:650259-650413 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 8 |
| Conread position: | 43-206 |
| Cow position: | chr29:26298952-26299121 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 28 |
| Conread position: | 43-207 |
| Cow position: | chr29:21265740-21265913 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 130 |
| Conread position: | 43-230 |
| Cow position: | chr29:29302681-29302483 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 196 |
| Conread position: | 44-190 |
| Cow position: | chr29:7054398-7054546 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 41, 27 |
| Conread position: | 44-230 |
| Cow position: | chr29:18021699-18021502 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 45-201 |
| Cow position: | chr29:4367705-4367870 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 24, 145 |
| Conread position: | 45-230 |
| Cow position: | chr29:942611-942801 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 25, 60 |
| Conread position: | 46-229 |
| Cow position: | chr29:5616888-5616688 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 51-178 |
| Cow position: | chr29:9938094-9937960 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 20 |
| Conread position: | 65-202 |
| Cow position: | chr29:19607519-19607377 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 65-207 |
| Cow position: | chr29:29559714-29559569 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 68-236 |
| Cow position: | chr29:15042458-15042628 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 69-201 |
| Cow position: | chr29:21675405-21675537 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 73, 40 |
| Conread position: | 69-251 |
| Cow position: | chr29:13127113-13126926 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 155 |
| Conread position: | 72-230 |
| Cow position: | chr29:23742249-23742085 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 77-242 |
| Cow position: | chr29:2274822-2274650 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 78-233 |
| Cow position: | chr29:6772151-6772315 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 88 |
Show alignments to all cow chromosomes.