Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10090H09.5 |
| Conread position: | 1-710 |
| Cow position: | chr10:8996761-8996052 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 567, 561 |
| Conread position: | 3-501 |
| Cow position: | chr10:9031418-9031896 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 286 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 414, 248 |
| Conread position: | 3-627 |
| Cow position: | chr10:9010487-9009863 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 48 |
| Conread position: | 10-588 |
| Cow position: | chr10:8996584-8996006 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-417 |
| Cow position: | chr10:9031260-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-677 |
| Cow position: | chr10:8996664-8996001 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 15-534 |
| Cow position: | chr10:21939147-21938631 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 328 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 114, 110 |
| Conread position: | 15-710 |
| Cow position: | chr10:8996831-8996136 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 637, 632 |
| Conread position: | 60-572 |
| Cow position: | chr10:9010346-9009834 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 312 |
| Conread position: | 65-710 |
| Cow position: | chr10:9010509-9009864 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 312, 326 |
| Conread position: | 76-616 |
| Cow position: | chr10:21939170-21938633 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 27 |
| Conread position: | 79-716 |
| Cow position: | chr10:8996851-8996215 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 399, 386 |
| Conread position: | 80-710 |
| Cow position: | chr10:9010576-9009948 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 16 |
| Conread position: | 85-501 |
| Cow position: | chr10:9031248-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 63 |
| Conread position: | 106-714 |
| Cow position: | chr10:21939378-21938784 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 154 |
| Conread position: | 107-707 |
| Cow position: | chr10:21939223-21938626 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 197 |
| Conread position: | 132-709 |
| Cow position: | chr10:8996882-8996305 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 149-585 |
| Cow position: | chr10:9031228-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 68 |
| Conread position: | 151-710 |
| Cow position: | chr10:9010591-9010032 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 234 |
| Conread position: | 191-489 |
| Cow position: | chr10:9031671-9031980 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 216-718 |
| Cow position: | chr10:8996882-8996381 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 70 |
| Conread position: | 236-669 |
| Cow position: | chr10:9031231-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 53 |
| Conread position: | 250-712 |
| Cow position: | chr10:9010574-9010114 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 11 |
| Conread position: | 294-710 |
| Cow position: | chr10:8996888-8996472 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 50 |
| Conread position: | 317-702 |
| Cow position: | chr10:9031228-9031613 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 52 |
| Conread position: | 380-712 |
| Cow position: | chr10:8996886-8996554 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 401-709 |
| Cow position: | chr10:9031228-9031536 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 70, 83 |
| Conread position: | 450-710 |
| Cow position: | chr10:8996900-8996640 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 485-710 |
| Cow position: | chr10:9031228-9031453 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.