Cow genome map

Conread name: Ss1.1-Ova1-OVRM10090H09.5

Conread position: 1-373
Cow position:
Alignm length: 374
Alignm identity: 230
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 278, 285

Conread position: 1-458
Cow position:
Alignm length: 460
Alignm identity: 276
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 291, 304

Conread position: 1-687
Cow position:
Alignm length: 692
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 42

Conread position: 1-708
Cow position:
Alignm length: 712
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 143

Conread position: 1-708
Cow position:
Alignm length: 712
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 143

Conread position: 1-715
Cow position:
Alignm length: 718
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 222

Conread position: 3-496
Cow position:
Alignm length: 497
Alignm identity: 307
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 60, 44

Conread position: 3-505
Cow position:
Alignm length: 503
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-543
Cow position:
Alignm length: 544
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 374, 382

Conread position: 3-544
Cow position:
Alignm length: 545
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 40

Conread position: 3-624
Cow position:
Alignm length: 624
Alignm identity: 379
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 63, 44

Conread position: 3-626
Cow position:
Alignm length: 625
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 374, 388

Conread position: 3-704
Cow position:
Alignm length: 704
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 232

Conread position: 3-704
Cow position:
Alignm length: 704
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 145

Conread position: 3-709
Cow position:
Alignm length: 711
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 144

Conread position: 3-710
Cow position:
Alignm length: 710
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 41

Conread position: 3-710
Cow position:
Alignm length: 709
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 389, 385

Conread position: 3-712
Cow position:
Alignm length: 715
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 130

Conread position: 7-296
Cow position:
Alignm length: 291
Alignm identity: 182
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 40

Conread position: 7-708
Cow position:
Alignm length: 706
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 37

Conread position: 7-715
Cow position:
Alignm length: 711
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 37

Conread position: 10-424
Cow position:
Alignm length: 416
Alignm identity: 261
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 367, 372

Conread position: 10-703
Cow position:
Alignm length: 694
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-704
Cow position:
Alignm length: 697
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 138

Conread position: 10-709
Cow position:
Alignm length: 703
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 48

Conread position: 10-709
Cow position:
Alignm length: 702
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 34

Conread position: 11-710
Cow position:
Alignm length: 703
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 30

Conread position: 13-459
Cow position:
Alignm length: 451
Alignm identity: 271
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 296, 303

Conread position: 13-684
Cow position:
Alignm length: 676
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 50

Conread position: 13-710
Cow position:
Alignm length: 699
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 385

Conread position: 14-710
Cow position:
Alignm length: 698
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 400, 405

Conread position: 15-462
Cow position:
Alignm length: 449
Alignm identity: 282
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 48, 36

Conread position: 15-710
Cow position:
Alignm length: 698
Alignm identity: 410
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 267, 273

Conread position: 19-710
Cow position:
Alignm length: 694
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 368, 379

Conread position: 22-343
Cow position:
Alignm length: 323
Alignm identity: 203
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 48, 27

Conread position: 25-290
Cow position:
Alignm length: 267
Alignm identity: 177
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 255, 262

Conread position: 25-505
Cow position:
Alignm length: 482
Alignm identity: 287
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 367, 375

Conread position: 25-518
Cow position:
Alignm length: 497
Alignm identity: 305
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 32, 21

Conread position: 25-600
Cow position:
Alignm length: 577
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 373

Conread position: 25-631
Cow position:
Alignm length: 613
Alignm identity: 374
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 31, 21

Conread position: 25-710
Cow position:
Alignm length: 689
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 367

Conread position: 25-710
Cow position:
Alignm length: 688
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 373

Conread position: 25-710
Cow position:
Alignm length: 687
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 449, 456

Conread position: 25-712
Cow position:
Alignm length: 691
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 80

Conread position: 26-460
Cow position:
Alignm length: 438
Alignm identity: 273
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 206, 197

Conread position: 29-710
Cow position:
Alignm length: 686
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 22

Conread position: 35-673
Cow position:
Alignm length: 643
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 28

Conread position: 35-708
Cow position:
Alignm length: 681
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 84

Conread position: 35-710
Cow position:
Alignm length: 678
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 356

Conread position: 35-710
Cow position:
Alignm length: 678
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 22

Conread position: 35-710
Cow position:
Alignm length: 679
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 113

Conread position: 35-710
Cow position:
Alignm length: 680
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 16

Conread position: 36-710
Cow position:
Alignm length: 676
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 280

Conread position: 36-710
Cow position:
Alignm length: 678
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 251

Conread position: 36-710
Cow position:
Alignm length: 678
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 192

Conread position: 49-715
Cow position:
Alignm length: 668
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 174

Conread position: 55-710
Cow position:
Alignm length: 662
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 217

Conread position: 59-709
Cow position:
Alignm length: 653
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 425, 419

Conread position: 60-710
Cow position:
Alignm length: 652
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 339

Conread position: 61-615
Cow position:
Alignm length: 557
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 11

Conread position: 62-675
Cow position:
Alignm length: 614
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 0

Conread position: 63-508
Cow position:
Alignm length: 447
Alignm identity: 283
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 314, 319

Conread position: 65-702
Cow position:
Alignm length: 639
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 420, 122

Conread position: 65-704
Cow position:
Alignm length: 643
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 250

Conread position: 65-708
Cow position:
Alignm length: 648
Alignm identity: 384
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 224, 219

Conread position: 65-709
Cow position:
Alignm length: 651
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 146

Conread position: 66-709
Cow position:
Alignm length: 648
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 222

Conread position: 66-710
Cow position:
Alignm length: 646
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 503, 489

Conread position: 66-712
Cow position:
Alignm length: 649
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 418, 412

Conread position: 67-710
Cow position:
Alignm length: 648
Alignm identity: 364
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 310, 322

Conread position: 69-535
Cow position:
Alignm length: 467
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 73-709
Cow position:
Alignm length: 640
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 214

Conread position: 73-709
Cow position:
Alignm length: 640
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 222

Conread position: 73-712
Cow position:
Alignm length: 641
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 211

Conread position: 76-709
Cow position:
Alignm length: 636
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 215

Conread position: 76-709
Cow position:
Alignm length: 638
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 72

Conread position: 78-664
Cow position:
Alignm length: 589
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 313

Conread position: 78-703
Cow position:
Alignm length: 627
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 393, 403

Conread position: 78-708
Cow position:
Alignm length: 632
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 625, 0

Conread position: 78-710
Cow position:
Alignm length: 637
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 27

Conread position: 81-709
Cow position:
Alignm length: 630
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 397

Conread position: 82-583
Cow position:
Alignm length: 504
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 304

Conread position: 82-676
Cow position:
Alignm length: 600
Alignm identity: 366
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 54, 46

Conread position: 82-709
Cow position:
Alignm length: 629
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 534, 549

Conread position: 82-709
Cow position:
Alignm length: 632
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 231

Conread position: 82-710
Cow position:
Alignm length: 633
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 82-710
Cow position:
Alignm length: 630
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 565, 570

Conread position: 82-712
Cow position:
Alignm length: 634
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 65

Conread position: 82-712
Cow position:
Alignm length: 633
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 66

Conread position: 83-710
Cow position:
Alignm length: 630
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 86

Conread position: 83-712
Cow position:
Alignm length: 631
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 401, 396

Conread position: 83-715
Cow position:
Alignm length: 637
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 127

Conread position: 84-545
Cow position:
Alignm length: 465
Alignm identity: 285
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 41, 64

Conread position: 84-658
Cow position:
Alignm length: 578
Alignm identity: 340
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 313, 291

Conread position: 84-668
Cow position:
Alignm length: 587
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 35

Conread position: 84-708
Cow position:
Alignm length: 629
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 39

Conread position: 84-710
Cow position:
Alignm length: 630
Alignm identity: 369
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 195, 203

Conread position: 84-710
Cow position:
Alignm length: 629
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 301

Conread position: 84-710
Cow position:
Alignm length: 630
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 80

Conread position: 84-710
Cow position:
Alignm length: 630
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 117

Conread position: 86-703
Cow position:
Alignm length: 619
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 375, 397

Conread position: 86-710
Cow position:
Alignm length: 628
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 47

Conread position: 86-713
Cow position:
Alignm length: 631
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 197

Conread position: 87-709
Cow position:
Alignm length: 623
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 94-710
Cow position:
Alignm length: 620
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 5

Conread position: 106-543
Cow position:
Alignm length: 438
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 106-628
Cow position:
Alignm length: 525
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 116

Conread position: 106-708
Cow position:
Alignm length: 605
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 286

Conread position: 106-710
Cow position:
Alignm length: 608
Alignm identity: 361
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 191, 178

Conread position: 107-710
Cow position:
Alignm length: 610
Alignm identity: 355
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 108, 125

Conread position: 108-656
Cow position:
Alignm length: 550
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 376, 370

Conread position: 108-657
Cow position:
Alignm length: 552
Alignm identity: 320
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 96, 89

Conread position: 130-586
Cow position:
Alignm length: 459
Alignm identity: 278
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 102, 92

Conread position: 132-700
Cow position:
Alignm length: 569
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 138-709
Cow position:
Alignm length: 572
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 145-710
Cow position:
Alignm length: 570
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 59

Conread position: 146-676
Cow position:
Alignm length: 532
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 56

Conread position: 147-700
Cow position:
Alignm length: 556
Alignm identity: 343
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 61, 67

Conread position: 147-709
Cow position:
Alignm length: 565
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 137

Conread position: 147-709
Cow position:
Alignm length: 566
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 336

Conread position: 148-710
Cow position:
Alignm length: 564
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 243

Conread position: 153-708
Cow position:
Alignm length: 561
Alignm identity: 347
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 129, 62

Conread position: 156-710
Cow position:
Alignm length: 561
Alignm identity: 348
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 72, 63

Conread position: 159-710
Cow position:
Alignm length: 554
Alignm identity: 334
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 117, 112

Conread position: 163-594
Cow position:
Alignm length: 434
Alignm identity: 275
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 131, 121

Conread position: 166-710
Cow position:
Alignm length: 550
Alignm identity: 333
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 15, 49

Conread position: 183-709
Cow position:
Alignm length: 529
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 301

Conread position: 211-719
Cow position:
Alignm length: 513
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 7

Conread position: 218-710
Cow position:
Alignm length: 494
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 66

Conread position: 239-704
Cow position:
Alignm length: 469
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 288

Conread position: 240-710
Cow position:
Alignm length: 472
Alignm identity: 271
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 153, 147

Conread position: 241-708
Cow position:
Alignm length: 470
Alignm identity: 297
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 136, 53

Conread position: 242-710
Cow position:
Alignm length: 469
Alignm identity: 270
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 252-710
Cow position:
Alignm length: 460
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 32

Conread position: 258-710
Cow position:
Alignm length: 454
Alignm identity: 279
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 300, 306

Conread position: 314-710
Cow position:
Alignm length: 398
Alignm identity: 246
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 251, 241

Conread position: 321-710
Cow position:
Alignm length: 392
Alignm identity: 248
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 154, 56

Conread position: 357-712
Cow position:
Alignm length: 357
Alignm identity: 220
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 294, 289

Conread position: 405-664
Cow position:
Alignm length: 260
Alignm identity: 163
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 407-708
Cow position:
Alignm length: 303
Alignm identity: 189
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 296, 0

Conread position: 417-710
Cow position:
Alignm length: 294
Alignm identity: 195
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.