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Cow genome map

           
Conread name:
           
Ss1.1-Ova1-OVRM10090H09.5
        

               
Conread position:
               
1-256
               

               
Cow position:
               
chr18:51873703-51873959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
10, 40
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr18:56247313-56247053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr18:22634896-22635224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
39, 32
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr18:42674813-42674402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 283
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr18:44184378-44183953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr18:33064010-33063581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
124, 129
               

               
Conread position:
               
1-499
               

               
Cow position:
               
chr18:49022818-49023316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
110, 104
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr18:41198251-41198760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 51
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr18:50083706-50084247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-546
               

               
Cow position:
               
chr18:43120067-43119522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 50
               

               
Conread position:
               
1-581
               

               
Cow position:
               
chr18:49032622-49032042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 288
               

               
Conread position:
               
1-589
               

               
Cow position:
               
chr18:53560182-53560770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 50
               

               
Conread position:
               
1-590
               

               
Cow position:
               
chr18:42744377-42743788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 143
               

               
Conread position:
               
1-598
               

               
Cow position:
               
chr18:55523732-55524329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 306
               

               
Conread position:
               
1-600
               

               
Cow position:
               
chr18:1418006-1418606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
376, 381
               

               
Conread position:
               
1-605
               

               
Cow position:
               
chr18:43175100-43174496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 43
               

               
Conread position:
               
1-666
               

               
Cow position:
               
chr18:50048799-50048140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 28
               

               
Conread position:
               
1-673
               

               
Cow position:
               
chr18:53498481-53499145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 44
               

               
Conread position:
               
1-674
               

               
Cow position:
               
chr18:44398183-44397510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 283
               

               
Conread position:
               
1-677
               

               
Cow position:
               
chr18:50295192-50295868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 133
               

               
Conread position:
               
1-683
               

               
Cow position:
               
chr18:42791472-42792154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
376, 381
               

               
Conread position:
               
1-684
               

               
Cow position:
               
chr18:40324543-40323866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 9
               

               
Conread position:
               
1-691
               

               
Cow position:
               
chr18:55067022-55066334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 55
               

               
Conread position:
               
1-693
               

               
Cow position:
               
chr18:55018220-55018909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 63
               

               
Conread position:
               
1-700
               

               
Cow position:
               
chr18:54993160-54993859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 32
               

               
Conread position:
               
1-703
               

               
Cow position:
               
chr18:42791221-42791922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
374, 9
               

               
Conread position:
               
1-703
               

               
Cow position:
               
chr18:42791976-42792678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-703
               

               
Cow position:
               
chr18:54967123-54967822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 32
               

               
Conread position:
               
1-703
               

               
Cow position:
               
chr18:54979648-54980350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 51
               

               
Conread position:
               
1-703
               

               
Cow position:
               
chr18:54992992-54993694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 203
               

               
Conread position:
               
1-703
               

               
Cow position:
               
chr18:55017968-55018670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 32
               

               
Conread position:
               
1-703
               

               
Cow position:
               
chr18:56434057-56434751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
1-704
               

               
Cow position:
               
chr18:55523480-55524183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
373, 389
               

               
Conread position:
               
1-706
               

               
Cow position:
               
chr18:53586911-53586206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 41
               

               
Conread position:
               
1-708
               

               
Cow position:
               
chr18:44253635-44252942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
617, 262
               

               
Conread position:
               
1-709
               

               
Cow position:
               
chr18:41197663-41198371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
1-709
               

               
Cow position:
               
chr18:41197831-41198539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 223
               

               
Conread position:
               
1-709
               

               
Cow position:
               
chr18:41949260-41948552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 283
               

               
Conread position:
               
1-709
               

               
Cow position:
               
chr18:42744545-42743837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 41
               

               
Conread position:
               
1-709
               

               
Cow position:
               
chr18:42744629-42743921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 41
               

               
Conread position:
               
1-709
               

               
Cow position:
               
chr18:42837848-42837140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 43
               

               
Conread position:
               
1-709
               

               
Cow position:
               
chr18:42985304-42984596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 283
               

               
Conread position:
               
1-709
               

               
Cow position:
               
chr18:42985556-42984848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 43
               

               
Conread position:
               
1-709
               

               
Cow position:
               
chr18:43022898-43022191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
1-709
               

               
Cow position:
               
chr18:50848171-50848879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 125
               

               
Conread position:
               
1-709
               

               
Cow position:
               
chr18:54967207-54967912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 86
               

               
Conread position:
               
1-709
               

               
Cow position:
               
chr18:54992740-54993448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 50
               

               
Conread position:
               
1-709
               

               
Cow position:
               
chr18:54993076-54993784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 32
               

               
Conread position:
               
1-710
               

               
Cow position:
               
chr18:40074943-40075652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 66
               

               
Conread position:
               
1-710
               

               
Cow position:
               
chr18:42791053-42791761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 9
               

               
Conread position:
               
1-710
               

               
Cow position:
               
chr18:42791724-42792433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 214
               

               
Conread position:
               
1-710
               

               
Cow position:
               
chr18:43167628-43168337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 28
               

               
Conread position:
               
1-710
               

               
Cow position:
               
chr18:44398267-44397558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
376, 384
               

               
Conread position:
               
1-710
               

               
Cow position:
               
chr18:50059115-50058408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
615, 0
               

               
Conread position:
               
1-710
               

               
Cow position:
               
chr18:55008647-55009354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
1-710
               

               
Cow position:
               
chr18:56128377-56129086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
1-710
               

               
Cow position:
               
chr18:56248155-56247440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
1-712
               

               
Cow position:
               
chr18:50848255-50848966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 48
               

               
Conread position:
               
1-713
               

               
Cow position:
               
chr18:54967708-54968418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
1-715
               

               
Cow position:
               
chr18:42791808-42792521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 54
               

               
Conread position:
               
1-715
               

               
Cow position:
               
chr18:44154279-44153583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 0
               

               
Conread position:
               
1-720
               

               
Cow position:
               
chr18:54979480-54980202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 85
               

               
Conread position:
               
2-272
               

               
Cow position:
               
chr18:55524068-55524339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 49
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr18:53571983-53572317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
2-523
               

               
Cow position:
               
chr18:53586407-53585885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 46
               

               
Conread position:
               
2-541
               

               
Cow position:
               
chr18:56434385-56434925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
2-562
               

               
Cow position:
               
chr18:42959959-42959407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 124
               

               
Conread position:
               
2-590
               

               
Cow position:
               
chr18:53586574-53585986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 54
               

               
Conread position:
               
2-593
               

               
Cow position:
               
chr18:40075111-40075703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 43
               

               
Conread position:
               
2-625
               

               
Cow position:
               
chr18:53525864-53526486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 147
               

               
Conread position:
               
2-676
               

               
Cow position:
               
chr18:40075028-40075702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 49
               

               
Conread position:
               
2-705
               

               
Cow position:
               
chr18:50022398-50021689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 50
               

               
Conread position:
               
2-708
               

               
Cow position:
               
chr18:50098981-50099687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 5
               

               
Conread position:
               
2-708
               

               
Cow position:
               
chr18:55523564-55524271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 116
               

               
Conread position:
               
2-709
               

               
Cow position:
               
chr18:53560098-53560803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 46
               

               
Conread position:
               
2-710
               

               
Cow position:
               
chr18:50245999-50246706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 5
               

               
Conread position:
               
2-710
               

               
Cow position:
               
chr18:50848507-50849216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 51
               

               
Conread position:
               
2-710
               

               
Cow position:
               
chr18:53636124-53635415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 375
               

               
Conread position:
               
2-710
               

               
Cow position:
               
chr18:56128041-56128750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
3-261
               

               
Cow position:
               
chr18:41948586-41948327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
252, 0
               

               
Conread position:
               
3-329
               

               
Cow position:
               
chr18:43093076-43092752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
47, 42
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr18:56329173-56328828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-454
               

               
Cow position:
               
chr18:43048722-43048272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 39
               

               
Conread position:
               
3-464
               

               
Cow position:
               
chr18:51874230-51874691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
212, 200
               

               
Conread position:
               
3-507
               

               
Cow position:
               
chr18:43022477-43021973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 41
               

               
Conread position:
               
3-507
               

               
Cow position:
               
chr18:43168050-43168554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 26
               

               
Conread position:
               
3-535
               

               
Cow position:
               
chr18:44253310-44252789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
195, 0
               

               
Conread position:
               
3-541
               

               
Cow position:
               
chr18:50030976-50030436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
3-589
               

               
Cow position:
               
chr18:44184544-44183958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 53
               

               
Conread position:
               
3-590
               

               
Cow position:
               
chr18:55497616-55497029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
74, 44
               

               
Conread position:
               
3-598
               

               
Cow position:
               
chr18:33064176-33063581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 49
               

               
Conread position:
               
3-598
               

               
Cow position:
               
chr18:52447786-52448382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 145
               

               
Conread position:
               
3-669
               

               
Cow position:
               
chr18:42985134-42984468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 38
               

               
Conread position:
               
3-669
               

               
Cow position:
               
chr18:44240183-44240849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 30
               

               
Conread position:
               
3-670
               

               
Cow position:
               
chr18:56329509-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
374, 388
               

               
Conread position:
               
3-676
               

               
Cow position:
               
chr18:14454014-14453341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 37
               

               
Conread position:
               
3-677
               

               
Cow position:
               
chr18:50022058-50021382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 43
               

               
Conread position:
               
3-678
               

               
Cow position:
               
chr18:50281680-50282355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 137
               

               
Conread position:
               
3-679
               

               
Cow position:
               
chr18:50099653-50100329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 220
               

               
Conread position:
               
3-679
               

               
Cow position:
               
chr18:56128631-56129305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 383
               

               
Conread position:
               
3-679
               

               
Cow position:
               
chr18:56247723-56247059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
457, 201
               

               
Conread position:
               
3-700
               

               
Cow position:
               
chr18:43093904-43093219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 41
               

               
Conread position:
               
3-700
               

               
Cow position:
               
chr18:53509328-53510023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 38
               

               
Conread position:
               
3-702
               

               
Cow position:
               
chr18:53610377-53609679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
669, 0
               

               
Conread position:
               
3-703
               

               
Cow position:
               
chr18:42675147-42674447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 216
               

               
Conread position:
               
3-706
               

               
Cow position:
               
chr18:49033208-49032505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 281
               

               
Conread position:
               
3-708
               

               
Cow position:
               
chr18:53525782-53526486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 37
               

               
Conread position:
               
3-709
               

               
Cow position:
               
chr18:40086340-40085643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 125
               

               
Conread position:
               
3-709
               

               
Cow position:
               
chr18:40306259-40306965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 30
               

               
Conread position:
               
3-709
               

               
Cow position:
               
chr18:42693706-42692999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
66, 55
               

               
Conread position:
               
3-709
               

               
Cow position:
               
chr18:42837930-42837224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-709
               

               
Cow position:
               
chr18:42960125-42959428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 139
               

               
Conread position:
               
3-709
               

               
Cow position:
               
chr18:42985218-42984512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 122
               

               
Conread position:
               
3-709
               

               
Cow position:
               
chr18:43167714-43168420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 48
               

               
Conread position:
               
3-709
               

               
Cow position:
               
chr18:44240015-44240721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
388, 383
               

               
Conread position:
               
3-709
               

               
Cow position:
               
chr18:50848761-50849468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
698, 0
               

               
Conread position:
               
3-709
               

               
Cow position:
               
chr18:52447534-52448240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 145
               

               
Conread position:
               
3-709
               

               
Cow position:
               
chr18:53559763-53560470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 213
               

               
Conread position:
               
3-709
               

               
Cow position:
               
chr18:53635618-53634913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 55
               

               
Conread position:
               
3-709
               

               
Cow position:
               
chr18:56128127-56128833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 140
               

               
Conread position:
               
3-710
               

               
Cow position:
               
chr18:33064932-33064225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 49
               

               
Conread position:
               
3-710
               

               
Cow position:
               
chr18:42792062-42792769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 42
               

               
Conread position:
               
3-710
               

               
Cow position:
               
chr18:43093820-43093125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 49
               

               
Conread position:
               
3-710
               

               
Cow position:
               
chr18:49033040-49032333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 55
               

               
Conread position:
               
3-710
               

               
Cow position:
               
chr18:50059281-50058574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 388
               

               
Conread position:
               
3-710
               

               
Cow position:
               
chr18:50059449-50058742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 100
               

               
Conread position:
               
3-710
               

               
Cow position:
               
chr18:52447114-52447821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 79
               

               
Conread position:
               
3-710
               

               
Cow position:
               
chr18:56329677-56328970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 69
               

               
Conread position:
               
3-712
               

               
Cow position:
               
chr18:49032956-49032247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 281
               

               
Conread position:
               
3-712
               

               
Cow position:
               
chr18:50848425-50849134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
351, 357
               

               
Conread position:
               
3-712
               

               
Cow position:
               
chr18:53635954-53635245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 383
               

               
Conread position:
               
3-715
               

               
Cow position:
               
chr18:49032788-49032076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 281
               

               
Conread position:
               
3-718
               

               
Cow position:
               
chr18:53636038-53635324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 141
               

               
Conread position:
               
7-255
               

               
Cow position:
               
chr18:42674639-42674391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 37
               

               
Conread position:
               
7-458
               

               
Cow position:
               
chr18:50083964-50084417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
56, 44
               

               
Conread position:
               
7-508
               

               
Cow position:
               
chr18:43093240-43092741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 22
               

               
Conread position:
               
7-509
               

               
Cow position:
               
chr18:42744287-42743785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
462, 456
               

               
Conread position:
               
7-590
               

               
Cow position:
               
chr18:42837674-42837091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 210
               

               
Conread position:
               
7-591
               

               
Cow position:
               
chr18:43022557-43021973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 38
               

               
Conread position:
               
7-592
               

               
Cow position:
               
chr18:41198173-41198758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 35
               

               
Conread position:
               
7-597
               

               
Cow position:
               
chr18:41948918-41948327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
584, 0
               

               
Conread position:
               
7-630
               

               
Cow position:
               
chr18:42960037-42959423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 44
               

               
Conread position:
               
7-669
               

               
Cow position:
               
chr18:42744455-42743793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 277
               

               
Conread position:
               
7-673
               

               
Cow position:
               
chr18:50246171-50246837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 214
               

               
Conread position:
               
7-676
               

               
Cow position:
               
chr18:33064256-33063587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
387, 382
               

               
Conread position:
               
7-690
               

               
Cow position:
               
chr18:43175178-43174495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
384, 372
               

               
Conread position:
               
7-708
               

               
Cow position:
               
chr18:50049217-50048512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 33
               

               
Conread position:
               
7-709
               

               
Cow position:
               
chr18:40086504-40085812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 51
               

               
Conread position:
               
7-709
               

               
Cow position:
               
chr18:41197585-41198287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 22
               

               
Conread position:
               
7-709
               

               
Cow position:
               
chr18:42985382-42984680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 41
               

               
Conread position:
               
7-709
               

               
Cow position:
               
chr18:43023061-43022359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 277
               

               
Conread position:
               
7-709
               

               
Cow position:
               
chr18:43120313-43119611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 26
               

               
Conread position:
               
7-709
               

               
Cow position:
               
chr18:43175514-43174812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 190
               

               
Conread position:
               
7-709
               

               
Cow position:
               
chr18:44154444-44153746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 386
               

               
Conread position:
               
7-709
               

               
Cow position:
               
chr18:44240103-44240805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 117
               

               
Conread position:
               
7-709
               

               
Cow position:
               
chr18:44398345-44397643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
515, 522
               

               
Conread position:
               
7-710
               

               
Cow position:
               
chr18:41198005-41198708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 38
               

               
Conread position:
               
7-710
               

               
Cow position:
               
chr18:43093660-43092957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
551, 537
               

               
Conread position:
               
7-710
               

               
Cow position:
               
chr18:50048961-50048263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 22
               

               
Conread position:
               
7-710
               

               
Cow position:
               
chr18:50049129-50048426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 44
               

               
Conread position:
               
7-710
               

               
Cow position:
               
chr18:50059529-50058826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
380, 384
               

               
Conread position:
               
8-709
               

               
Cow position:
               
chr18:44239936-44240637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 43
               

               
Conread position:
               
8-710
               

               
Cow position:
               
chr18:42791311-42792013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 48
               

               
Conread position:
               
9-520
               

               
Cow position:
               
chr18:51751987-51751480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 272
               

               
Conread position:
               
9-689
               

               
Cow position:
               
chr18:55523656-55524336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 31
               

               
Conread position:
               
9-708
               

               
Cow position:
               
chr18:50083294-50083994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
694, 0
               

               
Conread position:
               
9-708
               

               
Cow position:
               
chr18:51789629-51788929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
451, 460
               

               
Conread position:
               
9-709
               

               
Cow position:
               
chr18:42960287-42959596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
10-234
               

               
Cow position:
               
chr18:50849272-50849496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-289
               

               
Cow position:
               
chr18:51367498-51367219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
52, 42
               

               
Conread position:
               
10-354
               

               
Cow position:
               
chr18:42984791-42984447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
285, 274
               

               
Conread position:
               
10-430
               

               
Cow position:
               
chr18:50058686-50058275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
269, 187
               

               
Conread position:
               
10-482
               

               
Cow position:
               
chr18:51812367-51811895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-516
               

               
Cow position:
               
chr18:44184453-44183947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 35
               

               
Conread position:
               
10-534
               

               
Cow position:
               
chr18:42792405-42792929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-535
               

               
Cow position:
               
chr18:50021883-50021357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 277
               

               
Conread position:
               
10-615
               

               
Cow position:
               
chr18:56493941-56494543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
571, 545
               

               
Conread position:
               
10-620
               

               
Cow position:
               
chr18:54966964-54967574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 62
               

               
Conread position:
               
10-649
               

               
Cow position:
               
chr18:51812535-51811896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-653
               

               
Cow position:
               
chr18:50848852-50849495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 205
               

               
Conread position:
               
10-662
               

               
Cow position:
               
chr18:56493857-56494508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 35
               

               
Conread position:
               
10-665
               

               
Cow position:
               
chr18:43093405-43092752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 42
               

               
Conread position:
               
10-671
               

               
Cow position:
               
chr18:42675056-42674395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 274
               

               
Conread position:
               
10-681
               

               
Cow position:
               
chr18:42792237-42792908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-700
               

               
Cow position:
               
chr18:51789460-51788770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 54
               

               
Conread position:
               
10-704
               

               
Cow position:
               
chr18:56128470-56129163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 41
               

               
Conread position:
               
10-706
               

               
Cow position:
               
chr18:51368421-51367726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 61
               

               
Conread position:
               
10-706
               

               
Cow position:
               
chr18:51969120-51969796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 115
               

               
Conread position:
               
10-708
               

               
Cow position:
               
chr18:42792153-42792852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 19
               

               
Conread position:
               
10-709
               

               
Cow position:
               
chr18:42744704-42744005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 116
               

               
Conread position:
               
10-709
               

               
Cow position:
               
chr18:42790977-42791676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
523
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-709
               

               
Cow position:
               
chr18:43022722-43022023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 274
               

               
Conread position:
               
10-709
               

               
Cow position:
               
chr18:44184705-44184006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
462, 453
               

               
Conread position:
               
10-709
               

               
Cow position:
               
chr18:44184789-44184089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 274
               

               
Conread position:
               
10-709
               

               
Cow position:
               
chr18:44253710-44253025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 34
               

               
Conread position:
               
10-709
               

               
Cow position:
               
chr18:52427982-52428681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 132
               

               
Conread position:
               
10-709
               

               
Cow position:
               
chr18:53559939-53560638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 41
               

               
Conread position:
               
10-709
               

               
Cow position:
               
chr18:55017893-55018592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 34
               

               
Conread position:
               
10-710
               

               
Cow position:
               
chr18:33064589-33063889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 42
               

               
Conread position:
               
10-710
               

               
Cow position:
               
chr18:40306602-40307302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 41
               

               
Conread position:
               
10-710
               

               
Cow position:
               
chr18:41197756-41198456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
558, 546
               

               
Conread position:
               
10-710
               

               
Cow position:
               
chr18:41197924-41198624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
10-710
               

               
Cow position:
               
chr18:41949167-41948467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-710
               

               
Cow position:
               
chr18:50848600-50849300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 42
               

               
Conread position:
               
10-712
               

               
Cow position:
               
chr18:42675224-42674522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 128
               

               
Conread position:
               
10-712
               

               
Cow position:
               
chr18:50099072-50099775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 115
               

               
Conread position:
               
10-712
               

               
Cow position:
               
chr18:51812787-51812085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 279
               

               
Conread position:
               
10-713
               

               
Cow position:
               
chr18:54979909-54980611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 23
               

               
Conread position:
               
10-715
               

               
Cow position:
               
chr18:43093981-43093289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 254
               

               
Conread position:
               
10-715
               

               
Cow position:
               
chr18:44184873-44184169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 208
               

               
Conread position:
               
10-717
               

               
Cow position:
               
chr18:50083463-50084169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
367, 379
               

               
Conread position:
               
10-718
               

               
Cow position:
               
chr18:44239854-44240563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
10-719
               

               
Cow position:
               
chr18:43175259-43174551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 274
               

               
Conread position:
               
11-488
               

               
Cow position:
               
chr18:51367665-51367187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 115
               

               
Conread position:
               
11-709
               

               
Cow position:
               
chr18:40086416-40085727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 200
               

               
Conread position:
               
11-709
               

               
Cow position:
               
chr18:43093572-43092874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 18
               

               
Conread position:
               
11-709
               

               
Cow position:
               
chr18:43175342-43174644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 292
               

               
Conread position:
               
11-710
               

               
Cow position:
               
chr18:41949334-41948635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 33
               

               
Conread position:
               
11-710
               

               
Cow position:
               
chr18:50059357-50058658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
455, 449
               

               
Conread position:
               
12-709
               

               
Cow position:
               
chr18:41949081-41948384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
367, 388
               

               
Conread position:
               
12-710
               

               
Cow position:
               
chr18:1417849-1418547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
13-275
               

               
Cow position:
               
chr18:51839041-51838779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-414
               

               
Cow position:
               
chr18:51765310-51764909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
53, 38
               

               
Conread position:
               
13-543
               

               
Cow position:
               
chr18:51838770-51838245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
13-619
               

               
Cow position:
               
chr18:43120139-43119533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 290
               

               
Conread position:
               
13-677
               

               
Cow position:
               
chr18:51400548-51401212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
555, 543
               

               
Conread position:
               
13-689
               

               
Cow position:
               
chr18:51752151-51751479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 51
               

               
Conread position:
               
13-700
               

               
Cow position:
               
chr18:51812700-51812013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-702
               

               
Cow position:
               
chr18:51789289-51788602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 30
               

               
Conread position:
               
13-709
               

               
Cow position:
               
chr18:44253791-44253108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
407, 0
               

               
Conread position:
               
13-709
               

               
Cow position:
               
chr18:44398423-44397727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
598, 594
               

               
Conread position:
               
13-709
               

               
Cow position:
               
chr18:50271393-50272089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
13-709
               

               
Cow position:
               
chr18:51765646-51764949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 206
               

               
Conread position:
               
13-709
               

               
Cow position:
               
chr18:51812616-51811920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 51
               

               
Conread position:
               
13-709
               

               
Cow position:
               
chr18:52447376-52448073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
689, 0
               

               
Conread position:
               
13-712
               

               
Cow position:
               
chr18:51789541-51788842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 276
               

               
Conread position:
               
13-719
               

               
Cow position:
               
chr18:43175592-43174887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 272
               

               
Conread position:
               
14-372
               

               
Cow position:
               
chr18:50271814-50272171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
205, 191
               

               
Conread position:
               
14-373
               

               
Cow position:
               
chr18:50251184-50251543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
263, 231
               

               
Conread position:
               
14-709
               

               
Cow position:
               
chr18:50848352-50849047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 368
               

               
Conread position:
               
14-709
               

               
Cow position:
               
chr18:53586982-53586286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 42
               

               
Conread position:
               
14-716
               

               
Cow position:
               
chr18:50099496-50100199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 209
               

               
Conread position:
               
15-263
               

               
Cow position:
               
chr18:42827674-42827922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
234, 239
               

               
Conread position:
               
15-554
               

               
Cow position:
               
chr18:50848941-50849480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 37
               

               
Conread position:
               
15-703
               

               
Cow position:
               
chr18:53509256-53509944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 136
               

               
Conread position:
               
15-709
               

               
Cow position:
               
chr18:50099413-50100107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
15-709
               

               
Cow position:
               
chr18:53525710-53526405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 136
               

               
Conread position:
               
15-713
               

               
Cow position:
               
chr18:55523326-55524024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 35
               

               
Conread position:
               
22-507
               

               
Cow position:
               
chr18:50246354-50246839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 118
               

               
Conread position:
               
22-658
               

               
Cow position:
               
chr18:42724563-42723927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
22-708
               

               
Cow position:
               
chr18:50245766-50246453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 118
               

               
Conread position:
               
23-705
               

               
Cow position:
               
chr18:42960601-42959927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 104
               

               
Conread position:
               
25-519
               

               
Cow position:
               
chr18:51400728-51401222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 39
               

               
Conread position:
               
25-703
               

               
Cow position:
               
chr18:51812940-51812262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 101
               

               
Conread position:
               
25-704
               

               
Cow position:
               
chr18:51765970-51765291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
514, 542
               

               
Conread position:
               
25-710
               

               
Cow position:
               
chr18:42791916-42792601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 357
               

               
Conread position:
               
25-710
               

               
Cow position:
               
chr18:50022291-50021600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 270
               

               
Conread position:
               
25-710
               

               
Cow position:
               
chr18:50059595-50058910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
25-710
               

               
Cow position:
               
chr18:50245853-50246538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
25-710
               

               
Cow position:
               
chr18:51752223-51751536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
352, 372
               

               
Conread position:
               
29-265
               

               
Cow position:
               
chr18:43053427-43053191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
30-709
               

               
Cow position:
               
chr18:51752301-51751623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
34-704
               

               
Cow position:
               
chr18:51765709-51765039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
345, 357
               

               
Conread position:
               
34-709
               

               
Cow position:
               
chr18:51789772-51789097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 97
               

               
Conread position:
               
35-340
               

               
Cow position:
               
chr18:42827610-42827915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
35-351
               

               
Cow position:
               
chr18:56247363-56247051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
219, 0
               

               
Conread position:
               
35-465
               

               
Cow position:
               
chr18:50271751-50272181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
428, 392
               

               
Conread position:
               
35-710
               

               
Cow position:
               
chr18:42791422-42792097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
35-710
               

               
Cow position:
               
chr18:56316171-56316846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 13
               

               
Conread position:
               
35-712
               

               
Cow position:
               
chr18:50848709-50849386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 68
               

               
Conread position:
               
35-715
               

               
Cow position:
               
chr18:51969379-51970047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 0
               

               
Conread position:
               
36-679
               

               
Cow position:
               
chr18:51789350-51788707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
357, 351
               

               
Conread position:
               
36-703
               

               
Cow position:
               
chr18:51400320-51400986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 5
               

               
Conread position:
               
36-708
               

               
Cow position:
               
chr18:33065151-33064478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
42-355
               

               
Cow position:
               
chr18:42693247-42692934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 10
               

               
Conread position:
               
42-709
               

               
Cow position:
               
chr18:44254094-44253431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 188
               

               
Conread position:
               
45-702
               

               
Cow position:
               
chr18:53525653-53526313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
665
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 35
               

               
Conread position:
               
45-703
               

               
Cow position:
               
chr18:53509199-53509860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 35
               

               
Conread position:
               
49-709
               

               
Cow position:
               
chr18:41948960-41948301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
651, 634
               

               
Conread position:
               
50-710
               

               
Cow position:
               
chr18:44239810-44240471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
422, 412
               

               
Conread position:
               
60-435
               

               
Cow position:
               
chr18:56247420-56247051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
345, 46
               

               
Conread position:
               
60-669
               

               
Cow position:
               
chr18:43022588-43021979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 69
               

               
Conread position:
               
60-709
               

               
Cow position:
               
chr18:44154475-44153830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 493
               

               
Conread position:
               
61-631
               

               
Cow position:
               
chr18:51874127-51874690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 32
               

               
Conread position:
               
61-679
               

               
Cow position:
               
chr18:44153890-44153286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
171, 153
               

               
Conread position:
               
61-719
               

               
Cow position:
               
chr18:52447256-52447917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
641, 0
               

               
Conread position:
               
62-430
               

               
Cow position:
               
chr18:14453223-14452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
62-520
               

               
Cow position:
               
chr18:52428538-52428996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
388, 401
               

               
Conread position:
               
62-520
               

               
Cow position:
               
chr18:52433719-52434177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
388, 401
               

               
Conread position:
               
62-580
               

               
Cow position:
               
chr18:51765429-51764911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 254
               

               
Conread position:
               
62-642
               

               
Cow position:
               
chr18:42827469-42828053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 222
               

               
Conread position:
               
62-700
               

               
Cow position:
               
chr18:42791197-42791835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 336
               

               
Conread position:
               
62-703
               

               
Cow position:
               
chr18:49032813-49032172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
62-708
               

               
Cow position:
               
chr18:33064369-33063722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 247
               

               
Conread position:
               
62-708
               

               
Cow position:
               
chr18:50245722-50246369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 162
               

               
Conread position:
               
62-709
               

               
Cow position:
               
chr18:33064705-33064057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
422, 415
               

               
Conread position:
               
62-710
               

               
Cow position:
               
chr18:42675256-42674608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
62-710
               

               
Cow position:
               
chr18:44398458-44397810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 20
               

               
Conread position:
               
62-710
               

               
Cow position:
               
chr18:52428286-52428935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 80
               

               
Conread position:
               
62-710
               

               
Cow position:
               
chr18:52433467-52434116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 64
               

               
Conread position:
               
63-717
               

               
Cow position:
               
chr18:42675339-42674686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
398, 415
               

               
Conread position:
               
64-709
               

               
Cow position:
               
chr18:42960316-42959680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 66
               

               
Conread position:
               
65-345
               

               
Cow position:
               
chr18:44397783-44397503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
60, 68
               

               
Conread position:
               
65-446
               

               
Cow position:
               
chr18:54968190-54968570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
65-526
               

               
Cow position:
               
chr18:51839241-51838780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
65-535
               

               
Cow position:
               
chr18:52447932-52448403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 320
               

               
Conread position:
               
65-604
               

               
Cow position:
               
chr18:52428457-52428996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 68
               

               
Conread position:
               
65-604
               

               
Cow position:
               
chr18:52433638-52434177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
476, 494
               

               
Conread position:
               
65-619
               

               
Cow position:
               
chr18:22634624-22635178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 160
               

               
Conread position:
               
65-620
               

               
Cow position:
               
chr18:56434365-56434920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
65-671
               

               
Cow position:
               
chr18:42837700-42837094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
587, 582
               

               
Conread position:
               
65-679
               

               
Cow position:
               
chr18:51874047-51874654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
411, 112
               

               
Conread position:
               
65-695
               

               
Cow position:
               
chr18:33093038-33092407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
566, 573
               

               
Conread position:
               
65-704
               

               
Cow position:
               
chr18:43167860-43168499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 321
               

               
Conread position:
               
65-708
               

               
Cow position:
               
chr18:51368450-51367807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 219
               

               
Conread position:
               
65-709
               

               
Cow position:
               
chr18:33064618-33063974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 219
               

               
Conread position:
               
65-709
               

               
Cow position:
               
chr18:40086530-40085896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
404, 324
               

               
Conread position:
               
65-709
               

               
Cow position:
               
chr18:40324648-40324004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
403, 413
               

               
Conread position:
               
65-709
               

               
Cow position:
               
chr18:42985576-42984932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 219
               

               
Conread position:
               
65-709
               

               
Cow position:
               
chr18:43120171-43119527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
65-709
               

               
Cow position:
               
chr18:43120666-43120031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 82
               

               
Conread position:
               
65-709
               

               
Cow position:
               
chr18:44184902-44184258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 69
               

               
Conread position:
               
65-709
               

               
Cow position:
               
chr18:44239741-44240385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 64
               

               
Conread position:
               
65-709
               

               
Cow position:
               
chr18:52428205-52428849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 156
               

               
Conread position:
               
65-709
               

               
Cow position:
               
chr18:52433386-52434030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 151
               

               
Conread position:
               
65-709
               

               
Cow position:
               
chr18:52447680-52448326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
573, 564
               

               
Conread position:
               
65-709
               

               
Cow position:
               
chr18:54966935-54967579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 237
               

               
Conread position:
               
65-709
               

               
Cow position:
               
chr18:54992972-54993616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 139
               

               
Conread position:
               
65-710
               

               
Cow position:
               
chr18:42791704-42792349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 157
               

               
Conread position:
               
65-710
               

               
Cow position:
               
chr18:50083602-50084247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 324
               

               
Conread position:
               
65-710
               

               
Cow position:
               
chr18:51368534-51367889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 17
               

               
Conread position:
               
65-712
               

               
Cow position:
               
chr18:43093434-43092788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
603, 0
               

               
Conread position:
               
65-713
               

               
Cow position:
               
chr18:51368702-51368054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 67
               

               
Conread position:
               
65-713
               

               
Cow position:
               
chr18:54993308-54993954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 139
               

               
Conread position:
               
65-716
               

               
Cow position:
               
chr18:56316369-56317020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
326, 302
               

               
Conread position:
               
66-500
               

               
Cow position:
               
chr18:49032473-49032039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
66-709
               

               
Cow position:
               
chr18:49033313-49032670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 325
               

               
Conread position:
               
66-709
               

               
Cow position:
               
chr18:52427618-52428261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
492, 479
               

               
Conread position:
               
66-709
               

               
Cow position:
               
chr18:52432967-52433610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
552, 569
               

               
Conread position:
               
66-710
               

               
Cow position:
               
chr18:56316286-56316930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 135
               

               
Conread position:
               
67-709
               

               
Cow position:
               
chr18:54979798-54980440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
67-710
               

               
Cow position:
               
chr18:50022078-50021432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 66
               

               
Conread position:
               
69-541
               

               
Cow position:
               
chr18:49022802-49023274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 118
               

               
Conread position:
               
69-673
               

               
Cow position:
               
chr18:53586591-53585987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 79
               

               
Conread position:
               
69-678
               

               
Cow position:
               
chr18:44184562-44183953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 61
               

               
Conread position:
               
69-709
               

               
Cow position:
               
chr18:52427537-52428177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
549, 567
               

               
Conread position:
               
69-710
               

               
Cow position:
               
chr18:43167612-43168253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 155
               

               
Conread position:
               
69-713
               

               
Cow position:
               
chr18:55523464-55524108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
69-715
               

               
Cow position:
               
chr18:52432886-52433532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
70-709
               

               
Cow position:
               
chr18:40306410-40307049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 233
               

               
Conread position:
               
71-709
               

               
Cow position:
               
chr18:40306159-40306797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
72-531
               

               
Cow position:
               
chr18:51970331-51970782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
32, 37
               

               
Conread position:
               
72-591
               

               
Cow position:
               
chr18:49022721-49023242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 118
               

               
Conread position:
               
72-688
               

               
Cow position:
               
chr18:42724849-42724233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
64, 54
               

               
Conread position:
               
72-709
               

               
Cow position:
               
chr18:44253900-44253276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 212
               

               
Conread position:
               
72-709
               

               
Cow position:
               
chr18:51969257-51969874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
72-712
               

               
Cow position:
               
chr18:42791627-42792267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
73-438
               

               
Cow position:
               
chr18:52011863-52011495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
197, 201
               

               
Conread position:
               
73-532
               

               
Cow position:
               
chr18:44253324-44252873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 52
               

               
Conread position:
               
73-548
               

               
Cow position:
               
chr18:51874216-51874691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 123
               

               
Conread position:
               
73-590
               

               
Cow position:
               
chr18:43048736-43048221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 211
               

               
Conread position:
               
73-672
               

               
Cow position:
               
chr18:40306749-40307348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 263
               

               
Conread position:
               
73-679
               

               
Cow position:
               
chr18:40324556-40323950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 218
               

               
Conread position:
               
73-679
               

               
Cow position:
               
chr18:50271537-50272143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 318
               

               
Conread position:
               
73-703
               

               
Cow position:
               
chr18:54992896-54993526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 142
               

               
Conread position:
               
73-704
               

               
Cow position:
               
chr18:44154291-44153667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 0
               

               
Conread position:
               
73-709
               

               
Cow position:
               
chr18:42675497-42674861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 299
               

               
Conread position:
               
73-709
               

               
Cow position:
               
chr18:52427709-52428345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 211
               

               
Conread position:
               
73-709
               

               
Cow position:
               
chr18:52427877-52428513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 218
               

               
Conread position:
               
73-709
               

               
Cow position:
               
chr18:52433058-52433694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 211
               

               
Conread position:
               
73-709
               

               
Cow position:
               
chr18:52433226-52433862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 317
               

               
Conread position:
               
73-709
               

               
Cow position:
               
chr18:52447100-52447736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 211
               

               
Conread position:
               
73-710
               

               
Cow position:
               
chr18:14454028-14453391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 51
               

               
Conread position:
               
73-710
               

               
Cow position:
               
chr18:40324808-40324171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 199
               

               
Conread position:
               
73-710
               

               
Cow position:
               
chr18:43094002-43093377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 0
               

               
Conread position:
               
73-710
               

               
Cow position:
               
chr18:52446932-52447569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
396, 386
               

               
Conread position:
               
73-710
               

               
Cow position:
               
chr18:55067120-55066481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 320
               

               
Conread position:
               
73-712
               

               
Cow position:
               
chr18:42790956-42791595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
73-714
               

               
Cow position:
               
chr18:51765838-51765198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 60
               

               
Conread position:
               
73-717
               

               
Cow position:
               
chr18:56247737-56247104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 211
               

               
Conread position:
               
74-709
               

               
Cow position:
               
chr18:50031073-50030436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 142
               

               
Conread position:
               
75-709
               

               
Cow position:
               
chr18:33064944-33064310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
522, 529
               

               
Conread position:
               
75-710
               

               
Cow position:
               
chr18:50281667-50282303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 21
               

               
Conread position:
               
76-348
               

               
Cow position:
               
chr18:43053464-43053192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-457
               

               
Cow position:
               
chr18:50251162-50251543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 253
               

               
Conread position:
               
76-591
               

               
Cow position:
               
chr18:43168039-43168554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 306
               

               
Conread position:
               
76-593
               

               
Cow position:
               
chr18:14453857-14453340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
224, 211
               

               
Conread position:
               
76-611
               

               
Cow position:
               
chr18:51839314-51838779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-621
               

               
Cow position:
               
chr18:51367768-51367223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 144
               

               
Conread position:
               
76-665
               

               
Cow position:
               
chr18:50058956-50058369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 315
               

               
Conread position:
               
76-678
               

               
Cow position:
               
chr18:41198158-41198760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 315
               

               
Conread position:
               
76-679
               

               
Cow position:
               
chr18:1417997-1418600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 172
               

               
Conread position:
               
76-679
               

               
Cow position:
               
chr18:50059124-50058521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 141
               

               
Conread position:
               
76-682
               

               
Cow position:
               
chr18:52428384-52428990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 49
               

               
Conread position:
               
76-682
               

               
Cow position:
               
chr18:52433565-52434171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
542, 554
               

               
Conread position:
               
76-682
               

               
Cow position:
               
chr18:52447775-52448382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 309
               

               
Conread position:
               
76-689
               

               
Cow position:
               
chr18:51789814-51789201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
383, 388
               

               
Conread position:
               
76-703
               

               
Cow position:
               
chr18:51766003-51765376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 211
               

               
Conread position:
               
76-703
               

               
Cow position:
               
chr18:51789646-51789019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 315
               

               
Conread position:
               
76-708
               

               
Cow position:
               
chr18:50099642-50100275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 155
               

               
Conread position:
               
76-708
               

               
Cow position:
               
chr18:51812805-51812172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
384, 393
               

               
Conread position:
               
76-709
               

               
Cow position:
               
chr18:51765751-51765117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 300
               

               
Conread position:
               
76-709
               

               
Cow position:
               
chr18:51812973-51812339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 75
               

               
Conread position:
               
76-709
               

               
Cow position:
               
chr18:52427964-52428597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 145
               

               
Conread position:
               
76-709
               

               
Cow position:
               
chr18:52428132-52428765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 49
               

               
Conread position:
               
76-709
               

               
Cow position:
               
chr18:52433313-52433946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 49
               

               
Conread position:
               
76-710
               

               
Cow position:
               
chr18:43093675-43093041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
460, 468
               

               
Conread position:
               
76-710
               

               
Cow position:
               
chr18:50048976-50048342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 64
               

               
Conread position:
               
76-710
               

               
Cow position:
               
chr18:51400443-51401077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
76-710
               

               
Cow position:
               
chr18:51839482-51838848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-710
               

               
Cow position:
               
chr18:52447523-52448157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
77-719
               

               
Cow position:
               
chr18:33093109-33092469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
78-519
               

               
Cow position:
               
chr18:54993655-54994096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
78-544
               

               
Cow position:
               
chr18:54993571-54994036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
27, 60
               

               
Conread position:
               
78-639
               

               
Cow position:
               
chr18:50271626-50272184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 43
               

               
Conread position:
               
78-673
               

               
Cow position:
               
chr18:54967951-54968546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 80
               

               
Conread position:
               
78-698
               

               
Cow position:
               
chr18:51400529-51401149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
78-703
               

               
Cow position:
               
chr18:50245990-50246615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 143
               

               
Conread position:
               
78-709
               

               
Cow position:
               
chr18:42694137-42693503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 386
               

               
Conread position:
               
78-709
               

               
Cow position:
               
chr18:49033049-49032418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 44
               

               
Conread position:
               
78-709
               

               
Cow position:
               
chr18:51813054-51812424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 6
               

               
Conread position:
               
78-709
               

               
Cow position:
               
chr18:51969021-51969631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 9
               

               
Conread position:
               
78-709
               

               
Cow position:
               
chr18:53610386-53609755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
78-710
               

               
Cow position:
               
chr18:49033217-49032585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
490, 484
               

               
Conread position:
               
78-710
               

               
Cow position:
               
chr18:50022493-50021855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 70
               

               
Conread position:
               
78-710
               

               
Cow position:
               
chr18:52012278-52011646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 305
               

               
Conread position:
               
78-710
               

               
Cow position:
               
chr18:56329518-56328886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 308
               

               
Conread position:
               
78-710
               

               
Cow position:
               
chr18:56329938-56329306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 130
               

               
Conread position:
               
78-710
               

               
Cow position:
               
chr18:56330106-56329474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 313
               

               
Conread position:
               
78-716
               

               
Cow position:
               
chr18:53498132-53498775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 156
               

               
Conread position:
               
78-719
               

               
Cow position:
               
chr18:50099224-50099866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 145
               

               
Conread position:
               
79-709
               

               
Cow position:
               
chr18:42693714-42693084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 269
               

               
Conread position:
               
79-710
               

               
Cow position:
               
chr18:56330189-56329558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
80-710
               

               
Cow position:
               
chr18:50049228-50048594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
80-712
               

               
Cow position:
               
chr18:53636130-53635497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 476
               

               
Conread position:
               
81-708
               

               
Cow position:
               
chr18:49033383-49032755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 45
               

               
Conread position:
               
81-710
               

               
Cow position:
               
chr18:51368603-51367973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 52
               

               
Conread position:
               
81-710
               

               
Cow position:
               
chr18:51766082-51765452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 215
               

               
Conread position:
               
81-713
               

               
Cow position:
               
chr18:49022396-49023026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 44
               

               
Conread position:
               
82-632
               

               
Cow position:
               
chr18:50083703-50084253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 42
               

               
Conread position:
               
82-668
               

               
Cow position:
               
chr18:55008644-55009230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 58
               

               
Conread position:
               
82-677
               

               
Cow position:
               
chr18:50030981-50030388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 27
               

               
Conread position:
               
82-678
               

               
Cow position:
               
chr18:51838785-51838199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
149, 138
               

               
Conread position:
               
82-678
               

               
Cow position:
               
chr18:51839056-51838443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
171, 465
               

               
Conread position:
               
82-703
               

               
Cow position:
               
chr18:50083451-50084072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 305
               

               
Conread position:
               
82-709
               

               
Cow position:
               
chr18:40306254-40306881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 140
               

               
Conread position:
               
82-709
               

               
Cow position:
               
chr18:51969342-51969958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 272
               

               
Conread position:
               
82-709
               

               
Cow position:
               
chr18:56248158-56247521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 252
               

               
Conread position:
               
82-710
               

               
Cow position:
               
chr18:40324715-40324087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 202
               

               
Conread position:
               
82-710
               

               
Cow position:
               
chr18:41197576-41198204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 204
               

               
Conread position:
               
82-710
               

               
Cow position:
               
chr18:42724587-42723959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
186, 181
               

               
Conread position:
               
82-710
               

               
Cow position:
               
chr18:43094158-43093545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 43
               

               
Conread position:
               
82-710
               

               
Cow position:
               
chr18:53635791-53635163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
82-710
               

               
Cow position:
               
chr18:56316050-56316678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
82-715
               

               
Cow position:
               
chr18:53610466-53609833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 298
               

               
Conread position:
               
83-594
               

               
Cow position:
               
chr18:42827406-42827918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 45
               

               
Conread position:
               
83-621
               

               
Cow position:
               
chr18:50251004-50251539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 122
               

               
Conread position:
               
83-703
               

               
Cow position:
               
chr18:40324882-40324262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 50
               

               
Conread position:
               
83-709
               

               
Cow position:
               
chr18:42744715-42744089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
83-709
               

               
Cow position:
               
chr18:42837934-42837308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 201
               

               
Conread position:
               
83-709
               

               
Cow position:
               
chr18:50059621-50058994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
619, 0
               

               
Conread position:
               
83-709
               

               
Cow position:
               
chr18:50098977-50099604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
378, 383
               

               
Conread position:
               
84-412
               

               
Cow position:
               
chr18:22634893-22635223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
21, 141
               

               
Conread position:
               
84-517
               

               
Cow position:
               
chr18:14453285-14452852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 131
               

               
Conread position:
               
84-523
               

               
Cow position:
               
chr18:55523897-55524338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
16, 150
               

               
Conread position:
               
84-524
               

               
Cow position:
               
chr18:53586410-53585968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 309
               

               
Conread position:
               
84-614
               

               
Cow position:
               
chr18:54968039-54968570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 122
               

               
Conread position:
               
84-621
               

               
Cow position:
               
chr18:52012104-52011567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 41
               

               
Conread position:
               
84-688
               

               
Cow position:
               
chr18:42693961-42693357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 11
               

               
Conread position:
               
84-703
               

               
Cow position:
               
chr18:55067025-55066404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 547
               

               
Conread position:
               
84-703
               

               
Cow position:
               
chr18:56493674-56494298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 67
               

               
Conread position:
               
84-703
               

               
Cow position:
               
chr18:56493845-56494466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 90
               

               
Conread position:
               
84-705
               

               
Cow position:
               
chr18:50250922-50251539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 36
               

               
Conread position:
               
84-709
               

               
Cow position:
               
chr18:40086684-40086056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 85
               

               
Conread position:
               
84-709
               

               
Cow position:
               
chr18:41949345-41948720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
84-709
               

               
Cow position:
               
chr18:43023068-43022443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
557, 549
               

               
Conread position:
               
84-709
               

               
Cow position:
               
chr18:49022483-49023106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 113
               

               
Conread position:
               
84-709
               

               
Cow position:
               
chr18:51367843-51367218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 34
               

               
Conread position:
               
84-709
               

               
Cow position:
               
chr18:52427804-52428429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 41
               

               
Conread position:
               
84-709
               

               
Cow position:
               
chr18:52433153-52433778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 41
               

               
Conread position:
               
84-709
               

               
Cow position:
               
chr18:54967120-54967744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 202
               

               
Conread position:
               
84-709
               

               
Cow position:
               
chr18:54979645-54980272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 202
               

               
Conread position:
               
84-710
               

               
Cow position:
               
chr18:50246164-50246790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 137
               

               
Conread position:
               
84-710
               

               
Cow position:
               
chr18:52012356-52011730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 40
               

               
Conread position:
               
84-710
               

               
Cow position:
               
chr18:53560095-53560723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 466
               

               
Conread position:
               
84-710
               

               
Cow position:
               
chr18:53635705-53635079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 158
               

               
Conread position:
               
84-710
               

               
Cow position:
               
chr18:56128376-56129002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
84-710
               

               
Cow position:
               
chr18:56329764-56329138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
84-710
               

               
Cow position:
               
chr18:56330016-56329390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
84-712
               

               
Cow position:
               
chr18:56128292-56128920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
481, 471
               

               
Conread position:
               
84-714
               

               
Cow position:
               
chr18:33064263-33063633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 64
               

               
Conread position:
               
84-717
               

               
Cow position:
               
chr18:55008560-55009194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 149
               

               
Conread position:
               
85-524
               

               
Cow position:
               
chr18:1418174-1418613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 297
               

               
Conread position:
               
85-677
               

               
Cow position:
               
chr18:49021571-49022164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
40, 44
               

               
Conread position:
               
85-703
               

               
Cow position:
               
chr18:52447364-52447982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 297
               

               
Conread position:
               
85-704
               

               
Cow position:
               
chr18:43120403-43119784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 29
               

               
Conread position:
               
85-709
               

               
Cow position:
               
chr18:42694044-42693419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 203
               

               
Conread position:
               
85-709
               

               
Cow position:
               
chr18:43120319-43119695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 49
               

               
Conread position:
               
85-709
               

               
Cow position:
               
chr18:43175352-43174728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 199
               

               
Conread position:
               
85-710
               

               
Cow position:
               
chr18:42675566-42674944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 28
               

               
Conread position:
               
85-710
               

               
Cow position:
               
chr18:49022568-49023192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 31
               

               
Conread position:
               
85-719
               

               
Cow position:
               
chr18:52447028-52447665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 46
               

               
Conread position:
               
86-631
               

               
Cow position:
               
chr18:51839388-51838843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
476, 482
               

               
Conread position:
               
86-673
               

               
Cow position:
               
chr18:55497617-55497030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
306, 301
               

               
Conread position:
               
86-681
               

               
Cow position:
               
chr18:43167965-43168558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 198
               

               
Conread position:
               
86-710
               

               
Cow position:
               
chr18:49022233-49022855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 38
               

               
Conread position:
               
87-511
               

               
Cow position:
               
chr18:43174846-43174431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 184
               

               
Conread position:
               
87-706
               

               
Cow position:
               
chr18:44154025-44153425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 45
               

               
Conread position:
               
87-708
               

               
Cow position:
               
chr18:50083288-50083910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 117
               

               
Conread position:
               
88-709
               

               
Cow position:
               
chr18:56247808-56247193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 305
               

               
Conread position:
               
89-386
               

               
Cow position:
               
chr18:51873708-51874005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
89-709
               

               
Cow position:
               
chr18:42675397-42674777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 44
               

               
Conread position:
               
90-709
               

               
Cow position:
               
chr18:56433896-56434505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
438, 125
               

               
Conread position:
               
90-710
               

               
Cow position:
               
chr18:41197500-41198120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 292
               

               
Conread position:
               
90-712
               

               
Cow position:
               
chr18:53610542-53609920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 48
               

               
Conread position:
               
90-720
               

               
Cow position:
               
chr18:51789885-51789251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 128
               

               
Conread position:
               
94-708
               

               
Cow position:
               
chr18:42693869-42693251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
95-704
               

               
Cow position:
               
chr18:53586985-53586376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 53
               

               
Conread position:
               
99-703
               

               
Cow position:
               
chr18:56433650-56434247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
26, 31
               

               
Conread position:
               
99-706
               

               
Cow position:
               
chr18:53586645-53586038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 73
               

               
Conread position:
               
100-709
               

               
Cow position:
               
chr18:53498328-53498938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 45
               

               
Conread position:
               
103-598
               

               
Cow position:
               
chr18:53571833-53572315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
239, 166
               

               
Conread position:
               
103-703
               

               
Cow position:
               
chr18:53559696-53560296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 274
               

               
Conread position:
               
103-710
               

               
Cow position:
               
chr18:50083220-50083827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 59
               

               
Conread position:
               
105-709
               

               
Cow position:
               
chr18:55017820-55018424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 57
               

               
Conread position:
               
106-677
               

               
Cow position:
               
chr18:51752310-51751739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 192
               

               
Conread position:
               
106-688
               

               
Cow position:
               
chr18:42693771-42693190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
539, 0
               

               
Conread position:
               
106-701
               

               
Cow position:
               
chr18:42694191-42693596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 19
               

               
Conread position:
               
106-709
               

               
Cow position:
               
chr18:51839536-51838932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 111
               

               
Conread position:
               
106-709
               

               
Cow position:
               
chr18:53587058-53586455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 126
               

               
Conread position:
               
108-679
               

               
Cow position:
               
chr18:54966894-54967465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 210
               

               
Conread position:
               
108-699
               

               
Cow position:
               
chr18:54979419-54980010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 273
               

               
Conread position:
               
108-703
               

               
Cow position:
               
chr18:53559953-53560548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 107
               

               
Conread position:
               
108-706
               

               
Cow position:
               
chr18:44253944-44253351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 46
               

               
Conread position:
               
108-706
               

               
Cow position:
               
chr18:52012164-52011566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 197
               

               
Conread position:
               
108-709
               

               
Cow position:
               
chr18:53559785-53560387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
592, 0
               

               
Conread position:
               
108-710
               

               
Cow position:
               
chr18:50031123-50030519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 25
               

               
Conread position:
               
108-710
               

               
Cow position:
               
chr18:54992679-54993281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
371, 376
               

               
Conread position:
               
108-720
               

               
Cow position:
               
chr18:53635597-53634983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
598, 564
               

               
Conread position:
               
109-710
               

               
Cow position:
               
chr18:50295216-50295817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 282
               

               
Conread position:
               
114-710
               

               
Cow position:
               
chr18:50059674-50059078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
120-709
               

               
Cow position:
               
chr18:54979515-54980104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 176
               

               
Conread position:
               
131-709
               

               
Cow position:
               
chr18:50281640-50282219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 254
               

               
Conread position:
               
132-710
               

               
Cow position:
               
chr18:51874030-51874601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 81
               

               
Conread position:
               
134-709
               

               
Cow position:
               
chr18:40086716-40086140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 34
               

               
Conread position:
               
136-517
               

               
Cow position:
               
chr18:53571950-53572318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
83, 50
               

               
Conread position:
               
137-709
               

               
Cow position:
               
chr18:56434102-56434673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 10
               

               
Conread position:
               
138-520
               

               
Cow position:
               
chr18:44153656-44153277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
138-709
               

               
Cow position:
               
chr18:42837963-42837392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
138-709
               

               
Cow position:
               
chr18:43167513-43168084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 82
               

               
Conread position:
               
138-709
               

               
Cow position:
               
chr18:52446913-52447484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
399, 410
               

               
Conread position:
               
138-709
               

               
Cow position:
               
chr18:53587110-53586539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
138-710
               

               
Cow position:
               
chr18:50271434-50272006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 166
               

               
Conread position:
               
139-709
               

               
Cow position:
               
chr18:42744743-42744173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
512, 508
               

               
Conread position:
               
139-710
               

               
Cow position:
               
chr18:50098949-50099520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 251
               

               
Conread position:
               
140-710
               

               
Cow position:
               
chr18:43167437-43168001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
140-710
               

               
Cow position:
               
chr18:44398464-44397894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
416, 424
               

               
Conread position:
               
141-709
               

               
Cow position:
               
chr18:40324989-40324424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 36
               

               
Conread position:
               
142-703
               

               
Cow position:
               
chr18:55017773-55018334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 149
               

               
Conread position:
               
142-709
               

               
Cow position:
               
chr18:43167601-43168168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 107
               

               
Conread position:
               
142-709
               

               
Cow position:
               
chr18:43175706-43175148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
423, 117
               

               
Conread position:
               
143-682
               

               
Cow position:
               
chr18:14454042-14453503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
431, 405
               

               
Conread position:
               
143-709
               

               
Cow position:
               
chr18:52432876-52433442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
475, 490
               

               
Conread position:
               
143-715
               

               
Cow position:
               
chr18:52427527-52428099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
144-709
               

               
Cow position:
               
chr18:50848146-50848711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 158
               

               
Conread position:
               
145-703
               

               
Cow position:
               
chr18:44253336-44252789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 149
               

               
Conread position:
               
145-714
               

               
Cow position:
               
chr18:43023091-43022521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
562, 0
               

               
Conread position:
               
146-684
               

               
Cow position:
               
chr18:42827385-42827923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
146-709
               

               
Cow position:
               
chr18:41949367-41948803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
559, 0
               

               
Conread position:
               
146-710
               

               
Cow position:
               
chr18:1417815-1418379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 138
               

               
Conread position:
               
146-710
               

               
Cow position:
               
chr18:42790945-42791509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 138
               

               
Conread position:
               
146-717
               

               
Cow position:
               
chr18:44184905-44184335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 72
               

               
Conread position:
               
147-682
               

               
Cow position:
               
chr18:49021552-49022084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
123, 19
               

               
Conread position:
               
147-703
               

               
Cow position:
               
chr18:53498035-53498594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 71
               

               
Conread position:
               
147-703
               

               
Cow position:
               
chr18:55008459-55009013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 82
               

               
Conread position:
               
147-709
               

               
Cow position:
               
chr18:49022712-49023274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 127
               

               
Conread position:
               
147-709
               

               
Cow position:
               
chr18:50059725-50059163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
415, 419
               

               
Conread position:
               
147-710
               

               
Cow position:
               
chr18:40074921-40075484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 192
               

               
Conread position:
               
147-710
               

               
Cow position:
               
chr18:52012459-52011898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 12
               

               
Conread position:
               
147-720
               

               
Cow position:
               
chr18:56433450-56434020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
166, 174
               

               
Conread position:
               
148-457
               

               
Cow position:
               
chr18:50251775-50252082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
148-708
               

               
Cow position:
               
chr18:22634623-22635183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 136
               

               
Conread position:
               
148-709
               

               
Cow position:
               
chr18:42985577-42985016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
149-703
               

               
Cow position:
               
chr18:42960315-42959761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 135
               

               
Conread position:
               
151-710
               

               
Cow position:
               
chr18:50848072-50848628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 66
               

               
Conread position:
               
152-676
               

               
Cow position:
               
chr18:43048741-43048221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
385, 399
               

               
Conread position:
               
152-704
               

               
Cow position:
               
chr18:50022587-50022029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 57
               

               
Conread position:
               
156-706
               

               
Cow position:
               
chr18:56248245-56247692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
135, 21
               

               
Conread position:
               
157-709
               

               
Cow position:
               
chr18:53509230-53509782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 162
               

               
Conread position:
               
157-709
               

               
Cow position:
               
chr18:53525684-53526236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 134
               

               
Conread position:
               
157-710
               

               
Cow position:
               
chr18:40306161-40306714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 85
               

               
Conread position:
               
158-677
               

               
Cow position:
               
chr18:14453295-14452775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 65
               

               
Conread position:
               
158-704
               

               
Cow position:
               
chr18:53497965-53498512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
230, 49
               

               
Conread position:
               
159-703
               

               
Cow position:
               
chr18:51752340-51751797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 12
               

               
Conread position:
               
162-712
               

               
Cow position:
               
chr18:33065109-33064559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 29
               

               
Conread position:
               
163-712
               

               
Cow position:
               
chr18:56316047-56316596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
445, 449
               

               
Conread position:
               
169-710
               

               
Cow position:
               
chr18:49033378-49032837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 115
               

               
Conread position:
               
169-715
               

               
Cow position:
               
chr18:51838782-51838242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
119, 113
               

               
Conread position:
               
171-710
               

               
Cow position:
               
chr18:49021492-49022028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
170, 80
               

               
Conread position:
               
176-712
               

               
Cow position:
               
chr18:55497695-55497159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
176, 171
               

               
Conread position:
               
177-710
               

               
Cow position:
               
chr18:51839549-51839016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 107
               

               
Conread position:
               
177-710
               

               
Cow position:
               
chr18:56493685-56494221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
41, 65
               

               
Conread position:
               
178-703
               

               
Cow position:
               
chr18:50295201-50295726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
179-709
               

               
Cow position:
               
chr18:50098905-50099436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
380, 365
               

               
Conread position:
               
179-710
               

               
Cow position:
               
chr18:54966881-54967412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 39
               

               
Conread position:
               
180-709
               

               
Cow position:
               
chr18:43175593-43175064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 116
               

               
Conread position:
               
183-703
               

               
Cow position:
               
chr18:53559692-53560212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 34
               

               
Conread position:
               
185-538
               

               
Cow position:
               
chr18:53598288-53597940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
187, 30
               

               
Conread position:
               
191-709
               

               
Cow position:
               
chr18:51400306-51400824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
192-703
               

               
Cow position:
               
chr18:53587140-53586629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 271
               

               
Conread position:
               
192-710
               

               
Cow position:
               
chr18:54979419-54979937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 89
               

               
Conread position:
               
195-432
               

               
Cow position:
               
chr18:43053428-43053192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
204-709
               

               
Cow position:
               
chr18:42837980-42837476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
204-710
               

               
Cow position:
               
chr18:42744758-42744256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
208-683
               

               
Cow position:
               
chr18:56248279-56247815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
33, 55
               

               
Conread position:
               
210-707
               

               
Cow position:
               
chr18:54979355-54979850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
22, 7
               

               
Conread position:
               
216-709
               

               
Cow position:
               
chr18:44184919-44184426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 173
               

               
Conread position:
               
216-715
               

               
Cow position:
               
chr18:43023104-43022605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 68
               

               
Conread position:
               
217-709
               

               
Cow position:
               
chr18:43175872-43175400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
221-710
               

               
Cow position:
               
chr18:42985588-42985099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 89
               

               
Conread position:
               
223-709
               

               
Cow position:
               
chr18:40086962-40086474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
80, 68
               

               
Conread position:
               
226-708
               

               
Cow position:
               
chr18:50245718-50246201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 58
               

               
Conread position:
               
227-678
               

               
Cow position:
               
chr18:51970318-51970761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
140, 57
               

               
Conread position:
               
227-709
               

               
Cow position:
               
chr18:14454042-14453560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
364, 376
               

               
Conread position:
               
227-709
               

               
Cow position:
               
chr18:52446918-52447400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 57
               

               
Conread position:
               
227-710
               

               
Cow position:
               
chr18:42790858-42791341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 316
               

               
Conread position:
               
230-712
               

               
Cow position:
               
chr18:42827385-42827867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
234-710
               

               
Cow position:
               
chr18:40324982-40324507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 65
               

               
Conread position:
               
236-598
               

               
Cow position:
               
chr18:56264976-56264620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 34
               

               
Conread position:
               
236-709
               

               
Cow position:
               
chr18:22634545-22635016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
34, 73
               

               
Conread position:
               
236-709
               

               
Cow position:
               
chr18:55008464-55008935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
236-710
               

               
Cow position:
               
chr18:50022587-50022110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 55
               

               
Conread position:
               
237-554
               

               
Cow position:
               
chr18:51873689-51874005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
237-709
               

               
Cow position:
               
chr18:43120335-43119863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
240-712
               

               
Cow position:
               
chr18:53636137-53635665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 146
               

               
Conread position:
               
240-712
               

               
Cow position:
               
chr18:56128028-56128500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
138, 159
               

               
Conread position:
               
241-709
               

               
Cow position:
               
chr18:53509230-53509698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 150
               

               
Conread position:
               
242-678
               

               
Cow position:
               
chr18:14453295-14452859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 61
               

               
Conread position:
               
243-710
               

               
Cow position:
               
chr18:51813057-51812591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
286, 9
               

               
Conread position:
               
245-709
               

               
Cow position:
               
chr18:42960546-42960091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
298, 54
               

               
Conread position:
               
246-713
               

               
Cow position:
               
chr18:50250839-50251296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 60
               

               
Conread position:
               
260-707
               

               
Cow position:
               
chr18:54966878-54967325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
305, 289
               

               
Conread position:
               
260-709
               

               
Cow position:
               
chr18:55523319-55523768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 266
               

               
Conread position:
               
261-709
               

               
Cow position:
               
chr18:43120395-43119946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 24
               

               
Conread position:
               
262-706
               

               
Cow position:
               
chr18:50295201-50295645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 198
               

               
Conread position:
               
266-703
               

               
Cow position:
               
chr18:53571828-53572252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
266-710
               

               
Cow position:
               
chr18:53559691-53560135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
273-550
               

               
Cow position:
               
chr18:55075112-55075391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
295-710
               

               
Cow position:
               
chr18:56330225-56329810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
59, 63
               

               
Conread position:
               
297-713
               

               
Cow position:
               
chr18:52427512-52427929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
11, 86
               

               
Conread position:
               
297-713
               

               
Cow position:
               
chr18:52432861-52433278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
11, 86
               

               
Conread position:
               
306-709
               

               
Cow position:
               
chr18:41949375-41948972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
311-709
               

               
Cow position:
               
chr18:14454042-14453644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-709
               

               
Cow position:
               
chr18:22634539-22634932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
35, 84
               

               
Conread position:
               
314-710
               

               
Cow position:
               
chr18:50049246-50048846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 330
               

               
Conread position:
               
315-715
               

               
Cow position:
               
chr18:40074921-40075321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
316-632
               

               
Cow position:
               
chr18:50251775-50252089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
62, 84
               

               
Conread position:
               
317-710
               

               
Cow position:
               
chr18:50295173-50295565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
319-716
               

               
Cow position:
               
chr18:51368784-51368387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 42
               

               
Conread position:
               
320-709
               

               
Cow position:
               
chr18:43048741-43048352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 233
               

               
Conread position:
               
325-703
               

               
Cow position:
               
chr18:14453296-14452918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 139
               

               
Conread position:
               
325-703
               

               
Cow position:
               
chr18:53497964-53498345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
140, 51
               

               
Conread position:
               
328-598
               

               
Cow position:
               
chr18:43053464-43053194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
350-716
               

               
Cow position:
               
chr18:50098908-50099275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 279
               

               
Conread position:
               
351-714
               

               
Cow position:
               
chr18:55523326-55523689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
27, 39
               

               
Conread position:
               
357-609
               

               
Cow position:
               
chr18:55075112-55075363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
30, 34
               

               
Conread position:
               
366-710
               

               
Cow position:
               
chr18:44398489-44398146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
70, 6
               

               
Conread position:
               
381-710
               

               
Cow position:
               
chr18:50271425-50271754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
251, 247
               

               
Conread position:
               
383-699
               

               
Cow position:
               
chr18:42724622-42724306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
384-709
               

               
Cow position:
               
chr18:44154487-44154159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
106, 174
               

               
Conread position:
               
385-712
               

               
Cow position:
               
chr18:41949380-41949052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
321, 0
               

               
Conread position:
               
389-710
               

               
Cow position:
               
chr18:50281646-50281967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
396-709
               

               
Cow position:
               
chr18:55017775-55018088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
163, 149
               

               
Conread position:
               
397-709
               

               
Cow position:
               
chr18:44239737-44240049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
75, 62
               

               
Conread position:
               
398-717
               

               
Cow position:
               
chr18:50059726-50059408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
220, 202
               

               
Conread position:
               
405-688
               

               
Cow position:
               
chr18:51873689-51873973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
133, 12
               

               
Conread position:
               
405-710
               

               
Cow position:
               
chr18:33093118-33092813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
410-708
               

               
Cow position:
               
chr18:50250835-50251126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
149, 69
               

               
Conread position:
               
410-710
               

               
Cow position:
               
chr18:14453295-14452995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
74, 53
               

               
Conread position:
               
417-708
               

               
Cow position:
               
chr18:51838786-51838496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
196, 0
               

               
Conread position:
               
420-683
               

               
Cow position:
               
chr18:43053456-43053193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
442-709
               

               
Cow position:
               
chr18:54992677-54992944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
119, 113
               

               
Conread position:
               
465-710
               

               
Cow position:
               
chr18:42827368-42827613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
475-715
               

               
Cow position:
               
chr18:42837962-42837722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
479-713
               

               
Cow position:
               
chr18:14454042-14453808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
112, 124
               

               
Conread position:
               
482-715
               

               
Cow position:
               
chr18:56248176-56247945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               
Show alignments to all cow chromosomes.