Cow genome map
Conread name: | Ss1.1-Ova1-OVRM10090H09.5 |
Conread position: | 1-345 |
Cow position: | chr19:23597369-23597713 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 229 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 279, 286 |
Conread position: | 1-457 |
Cow position: | chr19:20678291-20678744 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 286 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 59, 40 |
Conread position: | 1-591 |
Cow position: | chr19:23614528-23615118 (view UCSC Genome Browser custom track) |
Alignm length: | 595 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 210 |
Conread position: | 1-656 |
Cow position: | chr19:23649810-23650465 (view UCSC Genome Browser custom track) |
Alignm length: | 658 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 378, 390 |
Conread position: | 1-709 |
Cow position: | chr19:14939992-14940700 (view UCSC Genome Browser custom track) |
Alignm length: | 710 |
Alignm identity: | 472 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 615, 630 |
Conread position: | 1-709 |
Cow position: | chr19:23613436-23614144 (view UCSC Genome Browser custom track) |
Alignm length: | 710 |
Alignm identity: | 470 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 557, 544 |
Conread position: | 1-709 |
Cow position: | chr19:23614024-23614732 (view UCSC Genome Browser custom track) |
Alignm length: | 710 |
Alignm identity: | 476 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 51 |
Conread position: | 1-712 |
Cow position: | chr19:23613352-23614063 (view UCSC Genome Browser custom track) |
Alignm length: | 712 |
Alignm identity: | 472 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-716 |
Cow position: | chr19:23614108-23614823 (view UCSC Genome Browser custom track) |
Alignm length: | 717 |
Alignm identity: | 469 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 303, 284 |
Conread position: | 1-718 |
Cow position: | chr19:23613520-23614237 (view UCSC Genome Browser custom track) |
Alignm length: | 720 |
Alignm identity: | 475 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 390, 362 |
Conread position: | 2-655 |
Cow position: | chr19:14940412-14941066 (view UCSC Genome Browser custom track) |
Alignm length: | 656 |
Alignm identity: | 425 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 645 |
Conread position: | 3-509 |
Cow position: | chr19:23649980-23650486 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 303, 281 |
Conread position: | 3-697 |
Cow position: | chr19:14940162-14940856 (view UCSC Genome Browser custom track) |
Alignm length: | 695 |
Alignm identity: | 463 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-709 |
Cow position: | chr19:20677789-20678495 (view UCSC Genome Browser custom track) |
Alignm length: | 709 |
Alignm identity: | 457 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 157 |
Conread position: | 3-709 |
Cow position: | chr19:23613690-23614396 (view UCSC Genome Browser custom track) |
Alignm length: | 708 |
Alignm identity: | 464 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 217 |
Conread position: | 3-710 |
Cow position: | chr19:14960051-14959360 (view UCSC Genome Browser custom track) |
Alignm length: | 711 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 42 |
Conread position: | 7-436 |
Cow position: | chr19:20635371-20634946 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 264 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 126, 119 |
Conread position: | 7-436 |
Cow position: | chr19:43570130-43569703 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 281 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 202, 210 |
Conread position: | 7-678 |
Cow position: | chr19:14960381-14959714 (view UCSC Genome Browser custom track) |
Alignm length: | 676 |
Alignm identity: | 452 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 37 |
Conread position: | 7-706 |
Cow position: | chr19:23649480-23650179 (view UCSC Genome Browser custom track) |
Alignm length: | 703 |
Alignm identity: | 446 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 280 |
Conread position: | 7-710 |
Cow position: | chr19:14959559-14958871 (view UCSC Genome Browser custom track) |
Alignm length: | 705 |
Alignm identity: | 434 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 291, 253 |
Conread position: | 8-465 |
Cow position: | chr19:14948455-14947999 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 286 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 9-710 |
Cow position: | chr19:23596876-23597574 (view UCSC Genome Browser custom track) |
Alignm length: | 703 |
Alignm identity: | 456 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 26 |
Conread position: | 10-490 |
Cow position: | chr19:14940589-14941069 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 367, 372 |
Conread position: | 10-528 |
Cow position: | chr19:20635536-20635018 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 19 |
Conread position: | 10-540 |
Cow position: | chr19:43570211-43569685 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 385, 391 |
Conread position: | 10-709 |
Cow position: | chr19:23614369-23615068 (view UCSC Genome Browser custom track) |
Alignm length: | 703 |
Alignm identity: | 454 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 288, 274 |
Conread position: | 10-710 |
Cow position: | chr19:14940253-14940953 (view UCSC Genome Browser custom track) |
Alignm length: | 702 |
Alignm identity: | 469 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 366, 372 |
Conread position: | 10-710 |
Cow position: | chr19:14940337-14941037 (view UCSC Genome Browser custom track) |
Alignm length: | 703 |
Alignm identity: | 470 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 88 |
Conread position: | 10-710 |
Cow position: | chr19:23613613-23614313 (view UCSC Genome Browser custom track) |
Alignm length: | 702 |
Alignm identity: | 483 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 19 |
Conread position: | 10-710 |
Cow position: | chr19:23613865-23614565 (view UCSC Genome Browser custom track) |
Alignm length: | 706 |
Alignm identity: | 474 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 19 |
Conread position: | 13-586 |
Cow position: | chr19:23649906-23650479 (view UCSC Genome Browser custom track) |
Alignm length: | 576 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 43 |
Conread position: | 13-710 |
Cow position: | chr19:23613784-23614481 (view UCSC Genome Browser custom track) |
Alignm length: | 699 |
Alignm identity: | 468 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 276, 271 |
Conread position: | 14-677 |
Cow position: | chr19:23614457-23615118 (view UCSC Genome Browser custom track) |
Alignm length: | 666 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 15 |
Conread position: | 14-703 |
Cow position: | chr19:23649739-23650428 (view UCSC Genome Browser custom track) |
Alignm length: | 691 |
Alignm identity: | 447 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 363, 377 |
Conread position: | 35-679 |
Cow position: | chr19:23597067-23597711 (view UCSC Genome Browser custom track) |
Alignm length: | 647 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 342, 351 |
Conread position: | 35-715 |
Cow position: | chr19:14960437-14959762 (view UCSC Genome Browser custom track) |
Alignm length: | 682 |
Alignm identity: | 470 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 556, 290 |
Conread position: | 39-338 |
Cow position: | chr19:14959122-14958823 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 194 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 60-710 |
Cow position: | chr19:23614335-23614985 (view UCSC Genome Browser custom track) |
Alignm length: | 652 |
Alignm identity: | 441 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 578, 563 |
Conread position: | 62-574 |
Cow position: | chr19:14940557-14941069 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 231, 222 |
Conread position: | 62-667 |
Cow position: | chr19:43570243-43569642 (view UCSC Genome Browser custom track) |
Alignm length: | 608 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 235, 222 |
Conread position: | 65-429 |
Cow position: | chr19:23597349-23597713 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 234 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 65-710 |
Cow position: | chr19:23649454-23650099 (view UCSC Genome Browser custom track) |
Alignm length: | 647 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 312, 321 |
Conread position: | 66-697 |
Cow position: | chr19:23649707-23650338 (view UCSC Genome Browser custom track) |
Alignm length: | 633 |
Alignm identity: | 425 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 311, 316 |
Conread position: | 67-710 |
Cow position: | chr19:20677685-20678328 (view UCSC Genome Browser custom track) |
Alignm length: | 648 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 63 |
Conread position: | 67-710 |
Cow position: | chr19:20677769-20678412 (view UCSC Genome Browser custom track) |
Alignm length: | 647 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 308, 319 |
Conread position: | 68-709 |
Cow position: | chr19:43570395-43569764 (view UCSC Genome Browser custom track) |
Alignm length: | 643 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 404, 117 |
Conread position: | 73-708 |
Cow position: | chr19:23614264-23614899 (view UCSC Genome Browser custom track) |
Alignm length: | 640 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 123 |
Conread position: | 73-709 |
Cow position: | chr19:14940148-14940784 (view UCSC Genome Browser custom track) |
Alignm length: | 639 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 207, 214 |
Conread position: | 73-710 |
Cow position: | chr19:14960483-14959848 (view UCSC Genome Browser custom track) |
Alignm length: | 638 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 302, 0 |
Conread position: | 76-676 |
Cow position: | chr19:20635638-20635038 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 74 |
Conread position: | 76-706 |
Cow position: | chr19:23613343-23613973 (view UCSC Genome Browser custom track) |
Alignm length: | 634 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 230, 208 |
Conread position: | 76-710 |
Cow position: | chr19:20677946-20678580 (view UCSC Genome Browser custom track) |
Alignm length: | 641 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 55 |
Conread position: | 76-710 |
Cow position: | chr19:23649381-23650015 (view UCSC Genome Browser custom track) |
Alignm length: | 636 |
Alignm identity: | 430 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 408, 402 |
Conread position: | 78-536 |
Cow position: | chr19:14948469-14948012 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 391, 66 |
Conread position: | 78-709 |
Cow position: | chr19:20678032-20678663 (view UCSC Genome Browser custom track) |
Alignm length: | 635 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 143 |
Conread position: | 82-508 |
Cow position: | chr19:20678288-20678714 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 43 |
Conread position: | 82-710 |
Cow position: | chr19:14959568-14958955 (view UCSC Genome Browser custom track) |
Alignm length: | 633 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 295, 262 |
Conread position: | 82-710 |
Cow position: | chr19:23649303-23649931 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 295, 308 |
Conread position: | 82-710 |
Cow position: | chr19:23649639-23650267 (view UCSC Genome Browser custom track) |
Alignm length: | 630 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 197, 203 |
Conread position: | 83-710 |
Cow position: | chr19:20677533-20678160 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 491, 472 |
Conread position: | 84-709 |
Cow position: | chr19:14939989-14940616 (view UCSC Genome Browser custom track) |
Alignm length: | 628 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 84-710 |
Cow position: | chr19:23614023-23614649 (view UCSC Genome Browser custom track) |
Alignm length: | 629 |
Alignm identity: | 444 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 308, 304 |
Conread position: | 85-709 |
Cow position: | chr19:14959650-14959040 (view UCSC Genome Browser custom track) |
Alignm length: | 627 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 343 |
Conread position: | 104-716 |
Cow position: | chr19:20677305-20677913 (view UCSC Genome Browser custom track) |
Alignm length: | 618 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 54 |
Conread position: | 108-703 |
Cow position: | chr19:14959708-14959124 (view UCSC Genome Browser custom track) |
Alignm length: | 598 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 19 |
Conread position: | 108-710 |
Cow position: | chr19:20677642-20678244 (view UCSC Genome Browser custom track) |
Alignm length: | 605 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 25 |
Conread position: | 114-715 |
Cow position: | chr19:23597062-23597663 (view UCSC Genome Browser custom track) |
Alignm length: | 604 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 370, 363 |
Conread position: | 132-710 |
Cow position: | chr19:23596831-23597406 (view UCSC Genome Browser custom track) |
Alignm length: | 582 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 254, 201 |
Conread position: | 144-634 |
Cow position: | chr19:14948487-14947998 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 424, 78 |
Conread position: | 146-678 |
Cow position: | chr19:14916028-14916543 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 340 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 269, 107 |
Conread position: | 146-710 |
Cow position: | chr19:20635808-20635256 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 350 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 105, 70 |
Conread position: | 147-674 |
Cow position: | chr19:14959335-14958823 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 29 |
Conread position: | 148-710 |
Cow position: | chr19:43570398-43569847 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 331, 5 |
Conread position: | 150-594 |
Cow position: | chr19:14959257-14958819 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 137, 0 |
Conread position: | 153-709 |
Cow position: | chr19:20635729-20635173 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 50 |
Conread position: | 158-619 |
Cow position: | chr19:14915955-14916413 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 292 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 58, 13 |
Conread position: | 158-710 |
Cow position: | chr19:20635640-20635088 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 58 |
Conread position: | 158-715 |
Cow position: | chr19:20677440-20677997 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 46 |
Conread position: | 171-713 |
Cow position: | chr19:23613354-23613896 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 389, 396 |
Conread position: | 230-710 |
Cow position: | chr19:23649283-23649763 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 59 |
Conread position: | 231-673 |
Cow position: | chr19:14948484-14948043 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 80 |
Conread position: | 249-713 |
Cow position: | chr19:14939988-14940452 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 235, 229 |
Conread position: | 276-712 |
Cow position: | chr19:14960448-14960014 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 12 |
Conread position: | 294-710 |
Cow position: | chr19:23596825-23597238 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 258 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 19, 10 |
Conread position: | 300-720 |
Cow position: | chr19:23613315-23613734 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 411, 0 |
Conread position: | 313-710 |
Cow position: | chr19:23649282-23649679 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 242 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 315-716 |
Cow position: | chr19:14948484-14948084 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 316-716 |
Cow position: | chr19:43570398-43570009 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 258 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 61, 5 |
Conread position: | 476-710 |
Cow position: | chr19:14939966-14940197 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 156 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 10, 0 |
Show alignments to all cow chromosomes.