Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10090H09.5 |
| Conread position: | 1-669 |
| Cow position: | chr2:82799780-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 286 |
| Conread position: | 1-710 |
| Cow position: | chr2:82799696-82800405 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 237 |
| Conread position: | 3-678 |
| Cow position: | chr2:78755672-78756346 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 3-687 |
| Cow position: | chr2:86465522-86466206 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 399 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 210, 219 |
| Conread position: | 3-709 |
| Cow position: | chr2:78754350-78755038 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 3-710 |
| Cow position: | chr2:78755004-78755707 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 0 |
| Conread position: | 7-683 |
| Cow position: | chr2:78755343-78756016 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 170 |
| Conread position: | 7-709 |
| Cow position: | chr2:82799534-82800237 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 37 |
| Conread position: | 7-710 |
| Cow position: | chr2:78754840-78755541 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 384, 379 |
| Conread position: | 7-710 |
| Cow position: | chr2:78755510-78756212 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 157 |
| Conread position: | 7-710 |
| Cow position: | chr2:82799618-82800321 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 36 |
| Conread position: | 9-709 |
| Cow position: | chr2:5875172-5874471 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 417 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 261, 266 |
| Conread position: | 11-710 |
| Cow position: | chr2:78754109-78754799 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 24 |
| Conread position: | 35-703 |
| Cow position: | chr2:82799478-82800146 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 252 |
| Conread position: | 66-508 |
| Cow position: | chr2:48689474-48689033 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 269 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 43, 37 |
| Conread position: | 70-535 |
| Cow position: | chr2:82799933-82800398 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 76-700 |
| Cow position: | chr2:5874769-5874145 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 147 |
| Conread position: | 76-715 |
| Cow position: | chr2:86465175-86465813 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 78 |
| Conread position: | 76-719 |
| Cow position: | chr2:86465511-86466153 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 208 |
| Conread position: | 78-408 |
| Cow position: | chr2:5874431-5874101 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 119, 158 |
| Conread position: | 78-709 |
| Cow position: | chr2:78754827-78755457 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 206 |
| Conread position: | 78-709 |
| Cow position: | chr2:78755663-78756295 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 133 |
| Conread position: | 79-700 |
| Cow position: | chr2:5875018-5874397 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 374 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 107, 112 |
| Conread position: | 83-713 |
| Cow position: | chr2:86465266-86465897 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 201 |
| Conread position: | 84-702 |
| Cow position: | chr2:5874929-5874313 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 54 |
| Conread position: | 95-710 |
| Cow position: | chr2:82799454-82800069 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 193 |
| Conread position: | 98-710 |
| Cow position: | chr2:86465113-86465725 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 372 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 108-710 |
| Cow position: | chr2:78754371-78754955 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 72 |
| Conread position: | 145-712 |
| Cow position: | chr2:78754810-78755376 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 527, 0 |
| Conread position: | 146-709 |
| Cow position: | chr2:86465077-86465640 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 348 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 84, 63 |
| Conread position: | 159-715 |
| Cow position: | chr2:86465006-86465562 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 336 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 104, 93 |
| Conread position: | 171-616 |
| Cow position: | chr2:48689538-48689093 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 9, 121 |
| Conread position: | 178-710 |
| Cow position: | chr2:82799453-82799985 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 300 |
| Conread position: | 252-700 |
| Cow position: | chr2:48689540-48689093 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 64, 43 |
| Conread position: | 254-709 |
| Cow position: | chr2:78754100-78754550 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 47, 33 |
| Conread position: | 255-701 |
| Cow position: | chr2:5875178-5874732 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 281 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 267, 272 |
| Conread position: | 351-712 |
| Cow position: | chr2:48689525-48689165 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 43, 33 |
Show alignments to all cow chromosomes.