Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10090H09.5 |
| Conread position: | 1-459 |
| Cow position: | chr25:34714035-34714493 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 280 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 234, 240 |
| Conread position: | 1-592 |
| Cow position: | chr25:326666-327263 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 371 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 226, 220 |
| Conread position: | 1-619 |
| Cow position: | chr25:34769871-34769252 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 44 |
| Conread position: | 1-710 |
| Cow position: | chr25:34433525-34434216 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 425 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 246, 81 |
| Conread position: | 2-656 |
| Cow position: | chr25:34713868-34714522 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 27 |
| Conread position: | 3-253 |
| Cow position: | chr25:33145185-33145435 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 67, 55 |
| Conread position: | 3-313 |
| Cow position: | chr25:33157050-33156737 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 269, 260 |
| Conread position: | 3-328 |
| Cow position: | chr25:23420554-23420879 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-340 |
| Cow position: | chr25:36801630-36801967 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-373 |
| Cow position: | chr25:34769617-34769247 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 240 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-524 |
| Cow position: | chr25:33127721-33128242 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 26 |
| Conread position: | 3-589 |
| Cow position: | chr25:36801378-36801962 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 578, 0 |
| Conread position: | 3-663 |
| Cow position: | chr25:33299238-33299893 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 124 |
| Conread position: | 3-703 |
| Cow position: | chr25:33299070-33299770 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 124 |
| Conread position: | 3-704 |
| Cow position: | chr25:33298734-33299435 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 104 |
| Conread position: | 3-704 |
| Cow position: | chr25:36800634-36801335 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 26 |
| Conread position: | 3-710 |
| Cow position: | chr25:33298818-33299525 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 372, 376 |
| Conread position: | 7-496 |
| Cow position: | chr25:23420390-23420879 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 370, 375 |
| Conread position: | 7-592 |
| Cow position: | chr25:34447281-34447857 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 213 |
| Conread position: | 7-606 |
| Cow position: | chr25:33157382-33156784 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 86 |
| Conread position: | 7-704 |
| Cow position: | chr25:33298570-33299267 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 44 |
| Conread position: | 7-709 |
| Cow position: | chr25:326504-327213 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 50 |
| Conread position: | 7-709 |
| Cow position: | chr25:34732601-34731898 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 409 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 293, 284 |
| Conread position: | 7-709 |
| Cow position: | chr25:34770033-34769331 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 561, 555 |
| Conread position: | 8-710 |
| Cow position: | chr25:23420070-23420757 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 104 |
| Conread position: | 10-258 |
| Cow position: | chr25:327017-327265 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 60, 41 |
| Conread position: | 10-542 |
| Cow position: | chr25:33305309-33304788 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 332 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 265, 186 |
| Conread position: | 12-712 |
| Cow position: | chr25:33298659-33299359 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 39 |
| Conread position: | 13-590 |
| Cow position: | chr25:33305389-33304822 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 56 |
| Conread position: | 13-710 |
| Cow position: | chr25:33306201-33305512 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 13 |
| Conread position: | 25-703 |
| Cow position: | chr25:33298924-33299602 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 192 |
| Conread position: | 29-708 |
| Cow position: | chr25:25652301-25652981 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 399 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 348, 362 |
| Conread position: | 41-710 |
| Cow position: | chr25:34713823-34714492 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 406 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 88, 93 |
| Conread position: | 62-679 |
| Cow position: | chr25:33157411-33156794 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 62-709 |
| Cow position: | chr25:34447084-34447729 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 338, 326 |
| Conread position: | 62-710 |
| Cow position: | chr25:34732462-34731814 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 387 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 333, 339 |
| Conread position: | 63-541 |
| Cow position: | chr25:23420362-23420840 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 153 |
| Conread position: | 63-575 |
| Cow position: | chr25:36844641-36844142 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 310 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 312, 285 |
| Conread position: | 65-581 |
| Cow position: | chr25:34769723-34769207 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 312, 317 |
| Conread position: | 65-710 |
| Cow position: | chr25:34770059-34769414 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 312 |
| Conread position: | 66-340 |
| Cow position: | chr25:34769470-34769196 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 66-362 |
| Cow position: | chr25:366791-367083 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 265, 0 |
| Conread position: | 66-413 |
| Cow position: | chr25:346514-346861 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 141, 152 |
| Conread position: | 66-508 |
| Cow position: | chr25:22235895-22236337 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 41, 37 |
| Conread position: | 68-620 |
| Cow position: | chr25:33305979-33305433 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 28 |
| Conread position: | 73-710 |
| Cow position: | chr25:34769883-34769246 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 76-704 |
| Cow position: | chr25:33306055-33305433 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 6 |
| Conread position: | 77-554 |
| Cow position: | chr25:34433013-34433507 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 306 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 190, 360 |
| Conread position: | 78-343 |
| Cow position: | chr25:327001-327266 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 78-678 |
| Cow position: | chr25:326659-327265 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 170 |
| Conread position: | 78-710 |
| Cow position: | chr25:36801129-36801749 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 41 |
| Conread position: | 81-718 |
| Cow position: | chr25:34770128-34769491 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 19 |
| Conread position: | 82-674 |
| Cow position: | chr25:33144847-33145436 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 190 |
| Conread position: | 82-676 |
| Cow position: | chr25:36801373-36801967 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 82-710 |
| Cow position: | chr25:326495-327129 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 384 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 25, 21 |
| Conread position: | 82-710 |
| Cow position: | chr25:33299065-33299693 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 300 |
| Conread position: | 83-371 |
| Cow position: | chr25:18642172-18641881 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 47, 64 |
| Conread position: | 83-459 |
| Cow position: | chr25:346447-346823 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 308, 294 |
| Conread position: | 83-709 |
| Cow position: | chr25:34446937-34447563 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 566, 556 |
| Conread position: | 83-710 |
| Cow position: | chr25:36801218-36801833 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 118 |
| Conread position: | 83-713 |
| Cow position: | chr25:34447021-34447651 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 299 |
| Conread position: | 84-580 |
| Cow position: | chr25:34763246-34763739 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 297 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 199, 0 |
| Conread position: | 84-704 |
| Cow position: | chr25:33298479-33299099 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 84-708 |
| Cow position: | chr25:25652188-25652813 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 374 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 295, 307 |
| Conread position: | 84-708 |
| Cow position: | chr25:25652440-25653065 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 373 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 285, 298 |
| Conread position: | 86-539 |
| Cow position: | chr25:33305878-33305430 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 59 |
| Conread position: | 86-712 |
| Cow position: | chr25:33298565-33299191 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 23 |
| Conread position: | 86-712 |
| Cow position: | chr25:36800633-36801259 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 300 |
| Conread position: | 87-594 |
| Cow position: | chr25:22235831-22236339 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 312 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 9, 294 |
| Conread position: | 90-458 |
| Cow position: | chr25:25652950-25653318 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 192, 198 |
| Conread position: | 90-709 |
| Cow position: | chr25:33157467-33156848 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 198 |
| Conread position: | 95-549 |
| Cow position: | chr25:414763-414318 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 254, 13 |
| Conread position: | 97-616 |
| Cow position: | chr25:326342-326861 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 326 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 91, 70 |
| Conread position: | 98-589 |
| Cow position: | chr25:33127732-33128223 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 284 |
| Conread position: | 99-710 |
| Cow position: | chr25:33306447-33305842 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 374 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 133, 105 |
| Conread position: | 100-709 |
| Cow position: | chr25:34713714-34714324 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 45 |
| Conread position: | 107-674 |
| Cow position: | chr25:33127656-33128224 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 108-700 |
| Cow position: | chr25:33157532-33156941 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 12 |
| Conread position: | 108-712 |
| Cow position: | chr25:33306274-33305678 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 84 |
| Conread position: | 112-664 |
| Cow position: | chr25:23420327-23420879 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 129-710 |
| Cow position: | chr25:34770163-34769582 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 350 |
| Conread position: | 130-688 |
| Cow position: | chr25:34433486-34434037 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 342 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 355, 121 |
| Conread position: | 131-710 |
| Cow position: | chr25:36800594-36801173 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 33 |
| Conread position: | 132-469 |
| Cow position: | chr25:18642207-18641867 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 141, 184 |
| Conread position: | 132-701 |
| Cow position: | chr25:34763126-34763692 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 332 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 326, 0 |
| Conread position: | 132-703 |
| Cow position: | chr25:36801339-36801910 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 136-598 |
| Cow position: | chr25:34432988-34433468 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 294 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 217, 349 |
| Conread position: | 141-703 |
| Cow position: | chr25:36800520-36801082 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 82 |
| Conread position: | 147-712 |
| Cow position: | chr25:33305421-33304864 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 380, 17 |
| Conread position: | 148-710 |
| Cow position: | chr25:33298387-33298937 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 60 |
| Conread position: | 149-710 |
| Cow position: | chr25:36800444-36801005 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 183 |
| Conread position: | 150-632 |
| Cow position: | chr25:36844638-36844170 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 292 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 242, 237 |
| Conread position: | 159-708 |
| Cow position: | chr25:33298470-33299020 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 230 |
| Conread position: | 162-457 |
| Cow position: | chr25:34732614-34732319 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 143, 135 |
| Conread position: | 167-514 |
| Cow position: | chr25:346445-346794 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 8, 132 |
| Conread position: | 169-496 |
| Cow position: | chr25:34732103-34731776 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 169-497 |
| Cow position: | chr25:366726-367054 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 17, 21 |
| Conread position: | 169-710 |
| Cow position: | chr25:33144850-33145388 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 115 |
| Conread position: | 171-654 |
| Cow position: | chr25:22235831-22236315 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 296 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 9, 212 |
| Conread position: | 180-703 |
| Cow position: | chr25:23420311-23420834 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 216-554 |
| Cow position: | chr25:18642207-18641866 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 231-559 |
| Cow position: | chr25:366704-367032 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 39, 43 |
| Conread position: | 231-710 |
| Cow position: | chr25:33157494-33157015 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 67 |
| Conread position: | 239-712 |
| Cow position: | chr25:33298313-33298771 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 305 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 268, 44 |
| Conread position: | 241-708 |
| Cow position: | chr25:34446927-34447394 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 237 |
| Conread position: | 246-710 |
| Cow position: | chr25:33157563-33157099 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 42 |
| Conread position: | 247-607 |
| Cow position: | chr25:346443-346803 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 249-712 |
| Cow position: | chr25:33144846-33145306 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 128, 142 |
| Conread position: | 251-708 |
| Cow position: | chr25:34762828-34763283 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 274 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 30, 37 |
| Conread position: | 252-700 |
| Cow position: | chr25:22235829-22236277 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 284 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 63, 43 |
| Conread position: | 255-496 |
| Cow position: | chr25:427332-427573 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 219, 228 |
| Conread position: | 272-710 |
| Cow position: | chr25:34446874-34447312 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 277 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 46, 55 |
| Conread position: | 273-710 |
| Cow position: | chr25:33127739-33128176 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 299-631 |
| Cow position: | chr25:18642208-18641873 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 80, 88 |
| Conread position: | 299-712 |
| Cow position: | chr25:34770161-34769748 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 37 |
| Conread position: | 302-709 |
| Cow position: | chr25:34433489-34433894 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 260 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 11, 118 |
| Conread position: | 310-692 |
| Cow position: | chr25:346422-346804 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-665 |
| Cow position: | chr25:366704-367054 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 39, 43 |
| Conread position: | 320-709 |
| Cow position: | chr25:33144833-33145220 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 184, 178 |
| Conread position: | 330-709 |
| Cow position: | chr25:34732614-34732234 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 142, 135 |
| Conread position: | 337-712 |
| Cow position: | chr25:33306461-33306095 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 275, 124 |
| Conread position: | 351-712 |
| Cow position: | chr25:22235844-22236205 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 43, 33 |
| Conread position: | 403-615 |
| Cow position: | chr25:34433003-34433215 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 68, 77 |
| Conread position: | 413-709 |
| Cow position: | chr25:34732615-34732318 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 71, 66 |
| Conread position: | 415-703 |
| Cow position: | chr25:346443-346731 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 107, 112 |
| Conread position: | 420-703 |
| Cow position: | chr25:366725-367008 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 102, 107 |
| Conread position: | 442-703 |
| Cow position: | chr25:414753-414497 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 468-699 |
| Cow position: | chr25:34432984-34433215 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.