Cow genome map


           Conread name:
           Ss1.1-Ova1-OVRM10090H09.5
        

               Conread position:
               2-288
               

               Cow position:
               chr5:34281427-34281719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               42, 187
               

               Conread position:
               60-293
               

               Cow position:
               chr5:34281401-34281634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               63, 191
               

               Conread position:
               107-543
               

               Cow position:
               chr5:19249832-19249398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               265
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               127, 57
               

               Conread position:
               137-388
               

               Cow position:
               chr5:34281394-34281644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               80, 75
               

               Conread position:
               230-466
               

               Cow position:
               chr5:34281403-34281638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               52, 58
               

               Conread position:
               297-541
               

               Cow position:
               chr5:34281386-34281630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               88, 210
               

               Conread position:
               373-619
               

               Cow position:
               chr5:34281378-34281624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               91, 214
               
Show alignments to all cow chromosomes.