Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10090H09.5 |
| Conread position: | 1-636 |
| Cow position: | chr6:49340825-49341458 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 3-431 |
| Cow position: | chr6:49396548-49396976 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-710 |
| Cow position: | chr6:49340407-49341114 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 26 |
| Conread position: | 3-710 |
| Cow position: | chr6:49340659-49341366 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 26 |
| Conread position: | 3-710 |
| Cow position: | chr6:49340743-49341449 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 30 |
| Conread position: | 6-709 |
| Cow position: | chr6:49395885-49396583 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 386, 338 |
| Conread position: | 7-710 |
| Cow position: | chr6:49396138-49396835 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 86 |
| Conread position: | 10-710 |
| Cow position: | chr6:49340498-49341198 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 23 |
| Conread position: | 13-708 |
| Cow position: | chr6:49396306-49397001 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 257 |
| Conread position: | 15-700 |
| Cow position: | chr6:49428831-49429514 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 410 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 25-710 |
| Cow position: | chr6:49396234-49396919 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 335, 329 |
| Conread position: | 25-716 |
| Cow position: | chr6:49395988-49396672 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 123 |
| Conread position: | 79-708 |
| Cow position: | chr6:49395709-49396330 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 391 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 98, 37 |
| Conread position: | 82-710 |
| Cow position: | chr6:49362097-49362701 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 366 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 59, 66 |
| Conread position: | 83-712 |
| Cow position: | chr6:49340403-49341032 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 306 |
| Conread position: | 84-710 |
| Cow position: | chr6:49428732-49429358 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 375 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 49, 42 |
| Conread position: | 84-710 |
| Cow position: | chr6:49428816-49429442 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 374 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 293, 301 |
| Conread position: | 146-710 |
| Cow position: | chr6:49340384-49340946 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 11 |
| Conread position: | 209-709 |
| Cow position: | chr6:49340361-49340861 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 178 |
Show alignments to all cow chromosomes.