Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10090H09.5 |
| Conread position: | 1-447 |
| Cow position: | |
| Alignm length: | 450 |
| Alignm identity: | 284 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 197, 220 |
| Conread position: | 1-451 |
| Cow position: | |
| Alignm length: | 451 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-587 |
| Cow position: | |
| Alignm length: | 589 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 283 |
| Conread position: | 1-647 |
| Cow position: | |
| Alignm length: | 651 |
| Alignm identity: | 398 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 57, 63 |
| Conread position: | 1-709 |
| Cow position: | |
| Alignm length: | 710 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 699, 0 |
| Conread position: | 1-710 |
| Cow position: | |
| Alignm length: | 711 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 51 |
| Conread position: | 1-710 |
| Cow position: | |
| Alignm length: | 710 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-619 |
| Cow position: | |
| Alignm length: | 620 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 521 |
| Conread position: | 2-677 |
| Cow position: | |
| Alignm length: | 684 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 44 |
| Conread position: | 3-662 |
| Cow position: | |
| Alignm length: | 663 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 61 |
| Conread position: | 7-506 |
| Cow position: | |
| Alignm length: | 502 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 70 |
| Conread position: | 7-703 |
| Cow position: | |
| Alignm length: | 699 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 436, 459 |
| Conread position: | 7-703 |
| Cow position: | |
| Alignm length: | 703 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 384, 368 |
| Conread position: | 7-709 |
| Cow position: | |
| Alignm length: | 705 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 26 |
| Conread position: | 7-710 |
| Cow position: | |
| Alignm length: | 706 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 277 |
| Conread position: | 7-710 |
| Cow position: | |
| Alignm length: | 705 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 385, 391 |
| Conread position: | 10-669 |
| Cow position: | |
| Alignm length: | 666 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 23 |
| Conread position: | 10-710 |
| Cow position: | |
| Alignm length: | 701 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-710 |
| Cow position: | |
| Alignm length: | 703 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 42 |
| Conread position: | 11-703 |
| Cow position: | |
| Alignm length: | 695 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 18 |
| Conread position: | 11-709 |
| Cow position: | |
| Alignm length: | 702 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 58 |
| Conread position: | 11-710 |
| Cow position: | |
| Alignm length: | 702 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 22 |
| Conread position: | 11-710 |
| Cow position: | |
| Alignm length: | 705 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 22 |
| Conread position: | 11-716 |
| Cow position: | |
| Alignm length: | 706 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 701, 0 |
| Conread position: | 13-709 |
| Cow position: | |
| Alignm length: | 699 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 465, 448 |
| Conread position: | 15-552 |
| Cow position: | |
| Alignm length: | 540 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 14 |
| Conread position: | 22-690 |
| Cow position: | |
| Alignm length: | 671 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 276 |
| Conread position: | 22-709 |
| Cow position: | |
| Alignm length: | 689 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 353, 359 |
| Conread position: | 60-709 |
| Cow position: | |
| Alignm length: | 652 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 44 |
| Conread position: | 65-413 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 230 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 65-509 |
| Cow position: | |
| Alignm length: | 446 |
| Alignm identity: | 277 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 153, 144 |
| Conread position: | 65-683 |
| Cow position: | |
| Alignm length: | 621 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 226 |
| Conread position: | 65-703 |
| Cow position: | |
| Alignm length: | 643 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 223 |
| Conread position: | 65-712 |
| Cow position: | |
| Alignm length: | 649 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 312, 321 |
| Conread position: | 73-497 |
| Cow position: | |
| Alignm length: | 428 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 296, 205 |
| Conread position: | 73-590 |
| Cow position: | |
| Alignm length: | 520 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 216 |
| Conread position: | 73-710 |
| Cow position: | |
| Alignm length: | 640 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 488, 462 |
| Conread position: | 76-703 |
| Cow position: | |
| Alignm length: | 630 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 315 |
| Conread position: | 82-701 |
| Cow position: | |
| Alignm length: | 620 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 83-709 |
| Cow position: | |
| Alignm length: | 630 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 47 |
| Conread position: | 84-709 |
| Cow position: | |
| Alignm length: | 631 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 137 |
| Conread position: | 84-710 |
| Cow position: | |
| Alignm length: | 628 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 133 |
| Conread position: | 86-709 |
| Cow position: | |
| Alignm length: | 625 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 531, 545 |
| Conread position: | 108-581 |
| Cow position: | |
| Alignm length: | 476 |
| Alignm identity: | 298 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 190, 176 |
| Conread position: | 108-710 |
| Cow position: | |
| Alignm length: | 606 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 32 |
| Conread position: | 109-710 |
| Cow position: | |
| Alignm length: | 606 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 435 |
| Conread position: | 132-712 |
| Cow position: | |
| Alignm length: | 584 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 200 |
| Conread position: | 140-709 |
| Cow position: | |
| Alignm length: | 573 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 340 |
| Conread position: | 189-619 |
| Cow position: | |
| Alignm length: | 434 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 357, 272 |
| Conread position: | 230-677 |
| Cow position: | |
| Alignm length: | 450 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 52 |
| Conread position: | 238-710 |
| Cow position: | |
| Alignm length: | 473 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 272-712 |
| Cow position: | |
| Alignm length: | 446 |
| Alignm identity: | 286 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 206, 189 |
| Conread position: | 308-710 |
| Cow position: | |
| Alignm length: | 404 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 168, 156 |
| Conread position: | 310-710 |
| Cow position: | |
| Alignm length: | 402 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 38 |
| Conread position: | 357-682 |
| Cow position: | |
| Alignm length: | 326 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 272, 0 |
| Conread position: | 437-716 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 35, 41 |
Show alignments to all cow chromosomes.