Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10090H09.5 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 38, 32 |
| Conread position: | 1-519 |
| Cow position: | |
| Alignm length: | 520 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 288 |
| Conread position: | 1-710 |
| Cow position: | |
| Alignm length: | 712 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 132 |
| Conread position: | 1-710 |
| Cow position: | |
| Alignm length: | 713 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 1-710 |
| Cow position: | |
| Alignm length: | 712 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 298, 283 |
| Conread position: | 1-710 |
| Cow position: | |
| Alignm length: | 711 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 1-719 |
| Cow position: | |
| Alignm length: | 719 |
| Alignm identity: | 672 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 711, 0 |
| Conread position: | 2-710 |
| Cow position: | |
| Alignm length: | 712 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 41 |
| Conread position: | 3-488 |
| Cow position: | |
| Alignm length: | 486 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 413, 0 |
| Conread position: | 3-678 |
| Cow position: | |
| Alignm length: | 680 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 7-597 |
| Cow position: | |
| Alignm length: | 594 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 207 |
| Conread position: | 7-685 |
| Cow position: | |
| Alignm length: | 679 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-440 |
| Cow position: | |
| Alignm length: | 431 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-596 |
| Cow position: | |
| Alignm length: | 589 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 99 |
| Conread position: | 10-703 |
| Cow position: | |
| Alignm length: | 694 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-683 |
| Cow position: | |
| Alignm length: | 676 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 66 |
| Conread position: | 11-712 |
| Cow position: | |
| Alignm length: | 706 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 24 |
| Conread position: | 13-541 |
| Cow position: | |
| Alignm length: | 537 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 218, 119 |
| Conread position: | 22-709 |
| Cow position: | |
| Alignm length: | 691 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 262 |
| Conread position: | 26-709 |
| Cow position: | |
| Alignm length: | 686 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 443, 435 |
| Conread position: | 65-436 |
| Cow position: | |
| Alignm length: | 373 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 151 |
| Conread position: | 65-715 |
| Cow position: | |
| Alignm length: | 652 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 321 |
| Conread position: | 67-710 |
| Cow position: | |
| Alignm length: | 651 |
| Alignm identity: | 395 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 72, 57 |
| Conread position: | 67-712 |
| Cow position: | |
| Alignm length: | 654 |
| Alignm identity: | 387 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 336, 77 |
| Conread position: | 73-709 |
| Cow position: | |
| Alignm length: | 638 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 325 |
| Conread position: | 73-710 |
| Cow position: | |
| Alignm length: | 639 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 312 |
| Conread position: | 76-362 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 281, 0 |
| Conread position: | 76-710 |
| Cow position: | |
| Alignm length: | 635 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 78-703 |
| Cow position: | |
| Alignm length: | 627 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 227 |
| Conread position: | 78-715 |
| Cow position: | |
| Alignm length: | 643 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 42 |
| Conread position: | 82-448 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 150, 138 |
| Conread position: | 82-538 |
| Cow position: | |
| Alignm length: | 460 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 51 |
| Conread position: | 82-619 |
| Cow position: | |
| Alignm length: | 545 |
| Alignm identity: | 334 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 57, 45 |
| Conread position: | 84-523 |
| Cow position: | |
| Alignm length: | 445 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 119 |
| Conread position: | 84-542 |
| Cow position: | |
| Alignm length: | 461 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 148, 138 |
| Conread position: | 84-710 |
| Cow position: | |
| Alignm length: | 629 |
| Alignm identity: | 374 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 207, 200 |
| Conread position: | 110-715 |
| Cow position: | |
| Alignm length: | 607 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 174 |
| Conread position: | 138-715 |
| Cow position: | |
| Alignm length: | 584 |
| Alignm identity: | 350 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 142, 149 |
| Conread position: | 142-715 |
| Cow position: | |
| Alignm length: | 574 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 144-710 |
| Cow position: | |
| Alignm length: | 573 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 397, 32 |
| Conread position: | 148-710 |
| Cow position: | |
| Alignm length: | 565 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 153-620 |
| Cow position: | |
| Alignm length: | 472 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 232 |
| Conread position: | 198-703 |
| Cow position: | |
| Alignm length: | 509 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 22 |
| Conread position: | 231-532 |
| Cow position: | |
| Alignm length: | 303 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 85, 80 |
| Conread position: | 321-719 |
| Cow position: | |
| Alignm length: | 399 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.