Cow genome map
Conread name: | Ss1.1-Ova1-OVRM10090H09.5 |
Conread position: | 1-271 |
Cow position: | chrX:25310311-25310581 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 180 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 38, 32 |
Conread position: | 1-519 |
Cow position: | chrX:29045175-29044657 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 279, 288 |
Conread position: | 1-710 |
Cow position: | chrX:25325082-25324373 (view UCSC Genome Browser custom track) |
Alignm length: | 712 |
Alignm identity: | 480 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 132 |
Conread position: | 1-710 |
Cow position: | chrX:25325166-25324457 (view UCSC Genome Browser custom track) |
Alignm length: | 713 |
Alignm identity: | 545 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 28 |
Conread position: | 1-710 |
Cow position: | chrX:25325250-25324541 (view UCSC Genome Browser custom track) |
Alignm length: | 712 |
Alignm identity: | 493 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 298, 283 |
Conread position: | 1-710 |
Cow position: | chrX:25325418-25324709 (view UCSC Genome Browser custom track) |
Alignm length: | 711 |
Alignm identity: | 488 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 28 |
Conread position: | 1-719 |
Cow position: | chrX:25325670-25324953 (view UCSC Genome Browser custom track) |
Alignm length: | 719 |
Alignm identity: | 672 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 711, 0 |
Conread position: | 2-710 |
Cow position: | chrX:25325837-25325129 (view UCSC Genome Browser custom track) |
Alignm length: | 712 |
Alignm identity: | 489 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 41 |
Conread position: | 3-488 |
Cow position: | chrX:25324660-25324179 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 413, 0 |
Conread position: | 3-678 |
Cow position: | chrX:25309893-25310568 (view UCSC Genome Browser custom track) |
Alignm length: | 680 |
Alignm identity: | 458 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 26 |
Conread position: | 7-597 |
Cow position: | chrX:25309981-25310571 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 207 |
Conread position: | 7-685 |
Cow position: | chrX:25324908-25324230 (view UCSC Genome Browser custom track) |
Alignm length: | 679 |
Alignm identity: | 458 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 10-440 |
Cow position: | chrX:29045082-29044652 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 10-596 |
Cow position: | chrX:29045250-29044663 (view UCSC Genome Browser custom track) |
Alignm length: | 589 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 99 |
Conread position: | 10-703 |
Cow position: | chrX:25325325-25324632 (view UCSC Genome Browser custom track) |
Alignm length: | 694 |
Alignm identity: | 487 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 11-683 |
Cow position: | chrX:29045333-29044661 (view UCSC Genome Browser custom track) |
Alignm length: | 676 |
Alignm identity: | 470 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 66 |
Conread position: | 11-712 |
Cow position: | chrX:25309733-25310434 (view UCSC Genome Browser custom track) |
Alignm length: | 706 |
Alignm identity: | 471 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 24 |
Conread position: | 13-541 |
Cow position: | chrX:12627535-12628062 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 321 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 218, 119 |
Conread position: | 22-709 |
Cow position: | chrX:29045721-29045055 (view UCSC Genome Browser custom track) |
Alignm length: | 691 |
Alignm identity: | 449 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 276, 262 |
Conread position: | 26-709 |
Cow position: | chrX:25325729-25325045 (view UCSC Genome Browser custom track) |
Alignm length: | 686 |
Alignm identity: | 473 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 443, 435 |
Conread position: | 65-436 |
Cow position: | chrX:25310207-25310578 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 151 |
Conread position: | 65-715 |
Cow position: | chrX:29045762-29045134 (view UCSC Genome Browser custom track) |
Alignm length: | 652 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 326, 321 |
Conread position: | 67-710 |
Cow position: | chrX:12627338-12627979 (view UCSC Genome Browser custom track) |
Alignm length: | 651 |
Alignm identity: | 395 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 72, 57 |
Conread position: | 67-712 |
Cow position: | chrX:12627422-12628066 (view UCSC Genome Browser custom track) |
Alignm length: | 654 |
Alignm identity: | 387 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 336, 77 |
Conread position: | 73-709 |
Cow position: | chrX:25325430-25324794 (view UCSC Genome Browser custom track) |
Alignm length: | 638 |
Alignm identity: | 452 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 320, 325 |
Conread position: | 73-710 |
Cow position: | chrX:25325514-25324877 (view UCSC Genome Browser custom track) |
Alignm length: | 639 |
Alignm identity: | 455 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 304, 312 |
Conread position: | 76-362 |
Cow position: | chrX:25310302-25310587 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 189 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 281, 0 |
Conread position: | 76-710 |
Cow position: | chrX:25324923-25324289 (view UCSC Genome Browser custom track) |
Alignm length: | 635 |
Alignm identity: | 451 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 78-703 |
Cow position: | chrX:25309884-25310509 (view UCSC Genome Browser custom track) |
Alignm length: | 627 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 202, 227 |
Conread position: | 78-715 |
Cow position: | chrX:25309716-25310352 (view UCSC Genome Browser custom track) |
Alignm length: | 643 |
Alignm identity: | 448 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 42 |
Conread position: | 82-448 |
Cow position: | chrX:14181308-14180942 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 220 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 150, 138 |
Conread position: | 82-538 |
Cow position: | chrX:29045829-29045373 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 51 |
Conread position: | 82-619 |
Cow position: | chrX:12627520-12628056 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 334 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 57, 45 |
Conread position: | 84-523 |
Cow position: | chrX:25310142-25310581 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 137, 119 |
Conread position: | 84-542 |
Cow position: | chrX:13826696-13826238 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 266 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 148, 138 |
Conread position: | 84-710 |
Cow position: | chrX:13826948-13826322 (view UCSC Genome Browser custom track) |
Alignm length: | 629 |
Alignm identity: | 374 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 207, 200 |
Conread position: | 110-715 |
Cow position: | chrX:29045318-29044714 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 191, 174 |
Conread position: | 138-715 |
Cow position: | chrX:12627325-12627900 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 350 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 142, 149 |
Conread position: | 142-715 |
Cow position: | chrX:29045367-29044798 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 144-710 |
Cow position: | chrX:25309700-25310264 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 397, 32 |
Conread position: | 148-710 |
Cow position: | chrX:25325859-25325297 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 16 |
Conread position: | 153-620 |
Cow position: | chrX:29045842-29045375 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 232 |
Conread position: | 198-703 |
Cow position: | chrX:25309668-25310173 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 22 |
Conread position: | 231-532 |
Cow position: | chrX:14181243-14180942 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 186 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 85, 80 |
Conread position: | 321-719 |
Cow position: | chrX:29045842-29045444 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.