Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10119A10.5 |
| Conread position: | 447-669 |
| Cow position: | chr18:52448058-52448280 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 447-672 |
| Cow position: | chr18:52447638-52447863 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 185, 192 |
| Conread position: | 447-672 |
| Cow position: | chr18:52447890-52448115 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 175, 190 |
| Conread position: | 450-672 |
| Cow position: | chr18:52447389-52447611 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 41 |
| Conread position: | 460-630 |
| Cow position: | chr18:41197698-41197868 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 32, 10 |
| Conread position: | 460-672 |
| Cow position: | chr18:44397896-44397684 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 17 |
| Conread position: | 477-672 |
| Cow position: | chr18:43174713-43174517 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 477-672 |
| Cow position: | chr18:44184494-44184299 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 490-630 |
| Cow position: | chr18:41198316-41198456 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 490-669 |
| Cow position: | chr18:42744480-42744301 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 490-669 |
| Cow position: | chr18:42744648-42744469 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 490-669 |
| Cow position: | chr18:43093433-43093254 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 490-672 |
| Cow position: | chr18:42744060-42743878 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 492-630 |
| Cow position: | chr18:41198570-41198708 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 493-672 |
| Cow position: | chr18:41197563-41197742 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 502-668 |
| Cow position: | chr18:1418337-1418501 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 503-672 |
| Cow position: | chr18:43048644-43048477 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 504-629 |
| Cow position: | chr18:40306672-40306797 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 504-669 |
| Cow position: | chr18:42744130-42743965 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 140, 152 |
| Conread position: | 505-630 |
| Cow position: | chr18:44398271-44398146 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 505-668 |
| Cow position: | chr18:42837768-42837605 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 505-668 |
| Cow position: | chr18:53560430-53560593 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 53, 58 |
| Conread position: | 505-668 |
| Cow position: | chr18:54967287-54967450 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 505-669 |
| Cow position: | chr18:42675069-42674905 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 505-669 |
| Cow position: | chr18:42744381-42744217 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 505-669 |
| Cow position: | chr18:43022147-43021983 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 505-672 |
| Cow position: | chr18:14453120-14452953 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 505-672 |
| Cow position: | chr18:41197659-41197826 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 505-672 |
| Cow position: | chr18:41198247-41198414 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 144, 150 |
| Conread position: | 505-672 |
| Cow position: | chr18:42827740-42827907 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 505-672 |
| Cow position: | chr18:42959636-42959469 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 505-672 |
| Cow position: | chr18:43175020-43174853 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 144, 150 |
| Conread position: | 505-672 |
| Cow position: | chr18:43175104-43174937 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 505-672 |
| Cow position: | chr18:51812716-51812549 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 505-672 |
| Cow position: | chr18:52447864-52448031 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 505-672 |
| Cow position: | chr18:52448032-52448199 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 507-672 |
| Cow position: | chr18:40324546-40324381 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 509-668 |
| Cow position: | chr18:43174848-43174689 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 66, 73 |
| Conread position: | 523-669 |
| Cow position: | chr18:41949330-41949184 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 531-672 |
| Cow position: | chr18:40324186-40324045 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.