Cow genome map

Conread name: Ss1.1-Ova1-OVRM10181H07.5

Conread position: 152-668
Cow position:
Alignm length: 530
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 8

Conread position: 160-364
Cow position:
Alignm length: 213
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 160-668
Cow position:
Alignm length: 526
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 24

Conread position: 169-380
Cow position:
Alignm length: 230
Alignm identity: 159
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 169-402
Cow position:
Alignm length: 251
Alignm identity: 177
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 43, 24

Conread position: 169-668
Cow position:
Alignm length: 512
Alignm identity: 338
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 60, 14

Conread position: 169-670
Cow position:
Alignm length: 538
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 197

Conread position: 169-670
Cow position:
Alignm length: 523
Alignm identity: 327
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 60, 139

Conread position: 170-367
Cow position:
Alignm length: 203
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 170-384
Cow position:
Alignm length: 222
Alignm identity: 154
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 17

Conread position: 170-403
Cow position:
Alignm length: 241
Alignm identity: 167
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 229

Conread position: 170-414
Cow position:
Alignm length: 249
Alignm identity: 164
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 15, 71

Conread position: 170-509
Cow position:
Alignm length: 348
Alignm identity: 225
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 17, 13

Conread position: 170-587
Cow position:
Alignm length: 425
Alignm identity: 269
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 50, 229

Conread position: 170-634
Cow position:
Alignm length: 482
Alignm identity: 307
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 50, 288

Conread position: 170-661
Cow position:
Alignm length: 506
Alignm identity: 322
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 17, 153

Conread position: 170-665
Cow position:
Alignm length: 513
Alignm identity: 324
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 62, 241

Conread position: 170-665
Cow position:
Alignm length: 511
Alignm identity: 324
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 17, 170

Conread position: 170-665
Cow position:
Alignm length: 516
Alignm identity: 325
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 17

Conread position: 170-665
Cow position:
Alignm length: 507
Alignm identity: 320
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 59, 249

Conread position: 170-665
Cow position:
Alignm length: 507
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 249

Conread position: 170-668
Cow position:
Alignm length: 511
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 324

Conread position: 170-668
Cow position:
Alignm length: 505
Alignm identity: 326
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 26, 13

Conread position: 170-668
Cow position:
Alignm length: 512
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 169

Conread position: 170-668
Cow position:
Alignm length: 521
Alignm identity: 334
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 50, 292

Conread position: 170-668
Cow position:
Alignm length: 510
Alignm identity: 327
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 50, 177

Conread position: 170-668
Cow position:
Alignm length: 513
Alignm identity: 329
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 50, 164

Conread position: 171-668
Cow position:
Alignm length: 504
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 14

Conread position: 172-414
Cow position:
Alignm length: 251
Alignm identity: 168
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 56, 6

Conread position: 172-665
Cow position:
Alignm length: 507
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 381

Conread position: 173-665
Cow position:
Alignm length: 502
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 31

Conread position: 173-668
Cow position:
Alignm length: 517
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 170

Conread position: 176-384
Cow position:
Alignm length: 209
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 176-668
Cow position:
Alignm length: 507
Alignm identity: 326
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 53, 158

Conread position: 177-661
Cow position:
Alignm length: 506
Alignm identity: 340
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 58, 98

Conread position: 177-668
Cow position:
Alignm length: 510
Alignm identity: 325
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 58, 38

Conread position: 177-670
Cow position:
Alignm length: 505
Alignm identity: 326
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 20

Conread position: 179-430
Cow position:
Alignm length: 261
Alignm identity: 183
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 47, 9

Conread position: 179-668
Cow position:
Alignm length: 498
Alignm identity: 313
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 155

Conread position: 180-668
Cow position:
Alignm length: 508
Alignm identity: 330
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 55, 115

Conread position: 182-668
Cow position:
Alignm length: 511
Alignm identity: 334
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 47

Conread position: 183-378
Cow position:
Alignm length: 199
Alignm identity: 139
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 23, 83

Conread position: 183-402
Cow position:
Alignm length: 226
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 5

Conread position: 183-403
Cow position:
Alignm length: 237
Alignm identity: 169
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 26, 225

Conread position: 183-503
Cow position:
Alignm length: 327
Alignm identity: 226
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 52, 24

Conread position: 183-617
Cow position:
Alignm length: 456
Alignm identity: 293
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 29, 144

Conread position: 183-637
Cow position:
Alignm length: 476
Alignm identity: 307
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 53, 119

Conread position: 183-668
Cow position:
Alignm length: 499
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 89

Conread position: 183-668
Cow position:
Alignm length: 494
Alignm identity: 306
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 13, 89

Conread position: 183-668
Cow position:
Alignm length: 518
Alignm identity: 342
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 56, 10

Conread position: 183-668
Cow position:
Alignm length: 513
Alignm identity: 326
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 85

Conread position: 183-669
Cow position:
Alignm length: 508
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 337

Conread position: 183-670
Cow position:
Alignm length: 510
Alignm identity: 329
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 25, 5

Conread position: 184-657
Cow position:
Alignm length: 486
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 180

Conread position: 185-378
Cow position:
Alignm length: 204
Alignm identity: 161
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 50, 8

Conread position: 185-403
Cow position:
Alignm length: 229
Alignm identity: 171
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 54, 0

Conread position: 185-649
Cow position:
Alignm length: 483
Alignm identity: 298
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 10

Conread position: 185-668
Cow position:
Alignm length: 494
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 10

Conread position: 188-668
Cow position:
Alignm length: 502
Alignm identity: 326
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 277

Conread position: 189-670
Cow position:
Alignm length: 494
Alignm identity: 319
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 46, 75

Conread position: 190-380
Cow position:
Alignm length: 193
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 191-378
Cow position:
Alignm length: 200
Alignm identity: 150
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 19, 74

Conread position: 191-402
Cow position:
Alignm length: 225
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 119

Conread position: 191-665
Cow position:
Alignm length: 484
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 79

Conread position: 200-665
Cow position:
Alignm length: 479
Alignm identity: 316
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 19, 158

Conread position: 204-402
Cow position:
Alignm length: 202
Alignm identity: 140
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 204-423
Cow position:
Alignm length: 221
Alignm identity: 153
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 205, 28

Conread position: 204-665
Cow position:
Alignm length: 467
Alignm identity: 303
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 186, 28

Conread position: 205-670
Cow position:
Alignm length: 480
Alignm identity: 310
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 21, 161

Conread position: 209-668
Cow position:
Alignm length: 473
Alignm identity: 313
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 32, 6

Conread position: 210-668
Cow position:
Alignm length: 471
Alignm identity: 308
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 33, 22

Conread position: 231-402
Cow position:
Alignm length: 174
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 153, 135

Conread position: 232-670
Cow position:
Alignm length: 447
Alignm identity: 294
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 156, 27

Conread position: 234-414
Cow position:
Alignm length: 182
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 152, 140

Conread position: 234-668
Cow position:
Alignm length: 448
Alignm identity: 291
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 156, 117

Conread position: 236-364
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 237-492
Cow position:
Alignm length: 257
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 23

Conread position: 245-665
Cow position:
Alignm length: 429
Alignm identity: 275
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 66, 118

Conread position: 249-645
Cow position:
Alignm length: 408
Alignm identity: 272
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 138, 30

Conread position: 277-668
Cow position:
Alignm length: 400
Alignm identity: 261
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 103, 117

Conread position: 294-668
Cow position:
Alignm length: 381
Alignm identity: 257
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 95, 28

Conread position: 303-668
Cow position:
Alignm length: 372
Alignm identity: 238
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 82, 110

Conread position: 304-670
Cow position:
Alignm length: 387
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 27

Conread position: 404-665
Cow position:
Alignm length: 279
Alignm identity: 185
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 100, 17

Conread position: 432-663
Cow position:
Alignm length: 253
Alignm identity: 188
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 76, 0

Conread position: 432-665
Cow position:
Alignm length: 240
Alignm identity: 170
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 77

Conread position: 433-668
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 52, 74

Conread position: 434-665
Cow position:
Alignm length: 245
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 72, 134

Conread position: 446-668
Cow position:
Alignm length: 224
Alignm identity: 164
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 141, 57

Conread position: 446-668
Cow position:
Alignm length: 234
Alignm identity: 166
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 52, 96

Conread position: 483-662
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 499-665
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 506-670
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 16, 113

Conread position: 508-659
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 508-663
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 76, 0

Conread position: 508-665
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 85, 0

Conread position: 508-665
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 508-665
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 119, 0

Conread position: 508-665
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 508-668
Cow position:
Alignm length: 161
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 147, 0

Conread position: 508-668
Cow position:
Alignm length: 162
Alignm identity: 128
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 72, 0

Conread position: 508-668
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 31

Conread position: 508-668
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 508-668
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 89, 0

Conread position: 508-668
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 508-670
Cow position:
Alignm length: 167
Alignm identity: 132
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 79, 59

Conread position: 508-670
Cow position:
Alignm length: 167
Alignm identity: 124
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 77, 93

Conread position: 508-670
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 24

Conread position: 511-668
Cow position:
Alignm length: 158
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 511-670
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 10

Conread position: 537-668
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 0

Show alignments to all cow chromosomes.