Cow genome map

Conread name: Ss1.1-Ova1-OVRM10181H07.5

Conread position: 152-668
Cow position:
Alignm length: 550
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 32

Conread position: 158-408
Cow position:
Alignm length: 263
Alignm identity: 187
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 53, 25

Conread position: 160-376
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 7, 0

Conread position: 160-384
Cow position:
Alignm length: 231
Alignm identity: 158
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 160-668
Cow position:
Alignm length: 524
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 263

Conread position: 160-668
Cow position:
Alignm length: 530
Alignm identity: 345
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 11, 29

Conread position: 168-377
Cow position:
Alignm length: 219
Alignm identity: 158
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 28, 19

Conread position: 169-373
Cow position:
Alignm length: 216
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 169-384
Cow position:
Alignm length: 222
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 99

Conread position: 169-434
Cow position:
Alignm length: 280
Alignm identity: 186
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 31

Conread position: 169-489
Cow position:
Alignm length: 329
Alignm identity: 217
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 127

Conread position: 169-516
Cow position:
Alignm length: 362
Alignm identity: 246
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 66, 229

Conread position: 169-668
Cow position:
Alignm length: 523
Alignm identity: 344
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 174

Conread position: 170-384
Cow position:
Alignm length: 220
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 170-384
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 170-384
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 170-384
Cow position:
Alignm length: 220
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 170-431
Cow position:
Alignm length: 271
Alignm identity: 182
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 17, 13

Conread position: 170-656
Cow position:
Alignm length: 498
Alignm identity: 309
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 63, 13

Conread position: 170-665
Cow position:
Alignm length: 507
Alignm identity: 328
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 50, 148

Conread position: 170-665
Cow position:
Alignm length: 511
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 241

Conread position: 170-668
Cow position:
Alignm length: 511
Alignm identity: 328
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 17, 9

Conread position: 170-668
Cow position:
Alignm length: 522
Alignm identity: 333
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 42, 161

Conread position: 170-668
Cow position:
Alignm length: 514
Alignm identity: 330
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 62, 164

Conread position: 170-668
Cow position:
Alignm length: 507
Alignm identity: 316
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 63, 15

Conread position: 170-668
Cow position:
Alignm length: 516
Alignm identity: 331
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 65, 38

Conread position: 170-668
Cow position:
Alignm length: 510
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 286

Conread position: 170-668
Cow position:
Alignm length: 509
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 284

Conread position: 170-668
Cow position:
Alignm length: 512
Alignm identity: 321
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 39, 98

Conread position: 170-670
Cow position:
Alignm length: 513
Alignm identity: 330
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 64, 23

Conread position: 171-414
Cow position:
Alignm length: 250
Alignm identity: 173
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 171-665
Cow position:
Alignm length: 505
Alignm identity: 322
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 50, 337

Conread position: 171-668
Cow position:
Alignm length: 510
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 16

Conread position: 171-668
Cow position:
Alignm length: 510
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 26

Conread position: 173-417
Cow position:
Alignm length: 252
Alignm identity: 149
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 173-668
Cow position:
Alignm length: 511
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 240

Conread position: 174-384
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 176-668
Cow position:
Alignm length: 505
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 236

Conread position: 182-428
Cow position:
Alignm length: 251
Alignm identity: 167
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 5, 92

Conread position: 183-378
Cow position:
Alignm length: 202
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 32, 119

Conread position: 183-380
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 0

Conread position: 183-384
Cow position:
Alignm length: 207
Alignm identity: 147
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 56

Conread position: 183-414
Cow position:
Alignm length: 243
Alignm identity: 172
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 33, 11

Conread position: 183-431
Cow position:
Alignm length: 263
Alignm identity: 178
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 26, 159

Conread position: 183-665
Cow position:
Alignm length: 501
Alignm identity: 315
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 18, 232

Conread position: 183-668
Cow position:
Alignm length: 500
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 187

Conread position: 183-668
Cow position:
Alignm length: 512
Alignm identity: 328
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 26, 85

Conread position: 183-668
Cow position:
Alignm length: 508
Alignm identity: 328
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 26, 159

Conread position: 183-668
Cow position:
Alignm length: 521
Alignm identity: 351
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 26, 160

Conread position: 183-668
Cow position:
Alignm length: 514
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 148

Conread position: 183-668
Cow position:
Alignm length: 506
Alignm identity: 334
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 26, 213

Conread position: 183-668
Cow position:
Alignm length: 503
Alignm identity: 323
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 26, 298

Conread position: 183-668
Cow position:
Alignm length: 507
Alignm identity: 337
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 29, 113

Conread position: 183-668
Cow position:
Alignm length: 512
Alignm identity: 337
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 5

Conread position: 183-672
Cow position:
Alignm length: 510
Alignm identity: 320
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 26, 160

Conread position: 184-668
Cow position:
Alignm length: 516
Alignm identity: 335
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 78

Conread position: 185-380
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 46, 15

Conread position: 185-665
Cow position:
Alignm length: 502
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 309

Conread position: 185-670
Cow position:
Alignm length: 512
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 10

Conread position: 188-665
Cow position:
Alignm length: 487
Alignm identity: 304
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 43, 91

Conread position: 188-670
Cow position:
Alignm length: 500
Alignm identity: 318
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 46, 27

Conread position: 189-665
Cow position:
Alignm length: 485
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 5

Conread position: 190-665
Cow position:
Alignm length: 510
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 93

Conread position: 190-668
Cow position:
Alignm length: 500
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 12

Conread position: 204-574
Cow position:
Alignm length: 383
Alignm identity: 269
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 31, 52

Conread position: 204-661
Cow position:
Alignm length: 462
Alignm identity: 291
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 180, 31

Conread position: 207-506
Cow position:
Alignm length: 308
Alignm identity: 205
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 25, 111

Conread position: 209-379
Cow position:
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 214-402
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 107, 25

Conread position: 222-509
Cow position:
Alignm length: 293
Alignm identity: 214
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 18, 94

Conread position: 231-405
Cow position:
Alignm length: 177
Alignm identity: 124
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 151, 46

Conread position: 231-665
Cow position:
Alignm length: 460
Alignm identity: 299
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 43, 96

Conread position: 233-664
Cow position:
Alignm length: 441
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 158

Conread position: 234-411
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 139, 132

Conread position: 234-668
Cow position:
Alignm length: 441
Alignm identity: 285
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 156, 132

Conread position: 236-402
Cow position:
Alignm length: 170
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 236-506
Cow position:
Alignm length: 281
Alignm identity: 188
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 118, 187

Conread position: 237-668
Cow position:
Alignm length: 440
Alignm identity: 276
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 231, 109

Conread position: 238-668
Cow position:
Alignm length: 440
Alignm identity: 282
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 102, 79

Conread position: 255-504
Cow position:
Alignm length: 250
Alignm identity: 170
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 255-651
Cow position:
Alignm length: 400
Alignm identity: 254
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 135, 74

Conread position: 276-402
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 104, 90

Conread position: 279-665
Cow position:
Alignm length: 394
Alignm identity: 257
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 111, 225

Conread position: 300-665
Cow position:
Alignm length: 381
Alignm identity: 257
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 81, 39

Conread position: 304-646
Cow position:
Alignm length: 349
Alignm identity: 219
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 86, 109

Conread position: 318-668
Cow position:
Alignm length: 361
Alignm identity: 238
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 71, 135

Conread position: 421-668
Cow position:
Alignm length: 269
Alignm identity: 193
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 77, 0

Conread position: 435-665
Cow position:
Alignm length: 242
Alignm identity: 170
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 103

Conread position: 508-656
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 77, 149

Conread position: 508-657
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 54

Conread position: 508-657
Cow position:
Alignm length: 154
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 508-664
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 97, 80

Conread position: 508-665
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 102

Conread position: 508-665
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 76, 122

Conread position: 508-665
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 508-668
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 508-668
Cow position:
Alignm length: 162
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 85, 140

Conread position: 508-668
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 508-668
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 508-668
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 508-668
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 84, 37

Conread position: 508-668
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 508-670
Cow position:
Alignm length: 167
Alignm identity: 119
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 508-670
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 508-672
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 509-670
Cow position:
Alignm length: 166
Alignm identity: 129
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 76, 146

Conread position: 510-663
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 510-665
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 16

Conread position: 511-656
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 525-668
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 561-668
Cow position:
Alignm length: 110
Alignm identity: 91
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 36, 0

Show alignments to all cow chromosomes.