Cow genome map

Conread name: Ss1.1-Ova1-OVRM10181H07.5

Conread position: 157-665
Cow position: chr14:43559313-43559825 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 333
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 10, 128

Conread position: 157-670
Cow position: chr14:44552916-44553427 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 332
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 10, 130

Conread position: 158-668
Cow position: chr14:11476209-11475696 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 340
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 13, 26

Conread position: 160-668
Cow position: chr14:191125-191646 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 340
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 7, 24

Conread position: 160-668
Cow position: chr14:2287347-2287862 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 119

Conread position: 165-402
Cow position: chr14:41410836-41411077 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 20

Conread position: 169-411
Cow position: chr14:15274758-15274501 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 173
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 169-665
Cow position: chr14:18417587-18418085 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 324
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 234

Conread position: 169-668
Cow position: chr14:19327172-19326666 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 338
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 19, 14

Conread position: 170-367
Cow position: chr14:10147966-10148168 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 170-384
Cow position: chr14:9046670-9046890 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 170-414
Cow position: chr14:13863005-13862757 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 112

Conread position: 170-434
Cow position: chr14:12124091-12123820 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 170-646
Cow position: chr14:45670944-45670448 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 318
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 50, 345

Conread position: 170-664
Cow position: chr14:44290157-44290656 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 337
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 39, 13

Conread position: 170-668
Cow position: chr14:751658-752162 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 325
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 50, 102

Conread position: 170-668
Cow position: chr14:5530149-5530655 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 13

Conread position: 170-668
Cow position: chr14:16808231-16807726 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 252

Conread position: 170-668
Cow position: chr14:17490247-17489743 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 164

Conread position: 170-668
Cow position: chr14:29046582-29046083 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 244

Conread position: 170-668
Cow position: chr14:37225249-37225753 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 323
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 63, 15

Conread position: 170-670
Cow position: chr14:38814395-38813884 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 13

Conread position: 171-431
Cow position: chr14:11153060-11152794 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 175
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 58, 163

Conread position: 171-670
Cow position: chr14:47939883-47939373 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 14

Conread position: 173-380
Cow position: chr14:25693043-25693252 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 143
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 96

Conread position: 176-366
Cow position: chr14:45207379-45207575 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 17

Conread position: 176-384
Cow position: chr14:30595259-30595044 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 31

Conread position: 178-380
Cow position: chr14:43556068-43556288 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 31, 19

Conread position: 179-378
Cow position: chr14:9521621-9521416 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 53, 161

Conread position: 183-369
Cow position: chr14:35930692-35930882 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 90

Conread position: 183-380
Cow position: chr14:12611507-12611716 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 183-380
Cow position: chr14:33402778-33402986 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 107

Conread position: 183-665
Cow position: chr14:45710633-45710143 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 319
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 26, 66

Conread position: 183-668
Cow position: chr14:1659551-1660055 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 327
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 29, 236

Conread position: 183-668
Cow position: chr14:5075048-5075533 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 99

Conread position: 183-668
Cow position: chr14:16999961-16999454 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 363
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 29, 5

Conread position: 184-584
Cow position: chr14:27978452-27978865 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 265
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 24, 224

Conread position: 185-384
Cow position: chr14:23256264-23256051 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 185-402
Cow position: chr14:2295370-2295598 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 27, 152

Conread position: 185-635
Cow position: chr14:45677984-45677527 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 14

Conread position: 185-668
Cow position: chr14:16342799-16342304 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 23

Conread position: 185-669
Cow position: chr14:35425220-35425711 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 323
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 16, 210

Conread position: 186-402
Cow position: chr14:41475884-41476101 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 79

Conread position: 188-664
Cow position: chr14:20783568-20784060 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 319
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 21, 155

Conread position: 189-425
Cow position: chr14:37454839-37454599 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 78

Conread position: 190-413
Cow position: chr14:11561948-11562176 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 113

Conread position: 196-646
Cow position: chr14:34861748-34862190 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 307
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 54, 31

Conread position: 200-665
Cow position: chr14:47643416-47643881 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 311
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 26, 13

Conread position: 204-378
Cow position: chr14:21745205-21745382 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 135

Conread position: 204-662
Cow position: chr14:45188676-45188221 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 293
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 181, 26

Conread position: 205-402
Cow position: chr14:40167552-40167348 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 208-628
Cow position: chr14:46403085-46403508 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 281
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 162

Conread position: 213-670
Cow position: chr14:17965441-17965899 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 286
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 46, 175

Conread position: 231-425
Cow position: chr14:11654708-11654520 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 135
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 188, 143

Conread position: 231-447
Cow position: chr14:33402998-33403207 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 232-405
Cow position: chr14:17610223-17610394 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 152, 106

Conread position: 236-383
Cow position: chr14:45027839-45027693 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 238-668
Cow position: chr14:45086388-45086816 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 280
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 107, 35

Conread position: 259-668
Cow position: chr14:46390444-46390033 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 269
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 126, 135

Conread position: 276-665
Cow position: chr14:42122375-42121987 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 195

Conread position: 276-670
Cow position: chr14:30704961-30704548 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 133

Conread position: 277-668
Cow position: chr14:35384420-35384031 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 252
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 176, 111

Conread position: 285-668
Cow position: chr14:44690391-44690772 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 246
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 44

Conread position: 291-668
Cow position: chr14:29774905-29774520 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 248
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 60, 97

Conread position: 296-668
Cow position: chr14:33490059-33490433 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 251
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 96, 62

Conread position: 340-509
Cow position: chr14:30761660-30761498 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 49, 68

Conread position: 394-668
Cow position: chr14:46502999-46503286 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 196
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 5

Conread position: 394-670
Cow position: chr14:20564348-20564081 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 10, 0

Conread position: 433-665
Cow position: chr14:7473689-7473944 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 434-670
Cow position: chr14:13462794-13463039 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 140

Conread position: 434-670
Cow position: chr14:38228358-38228113 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 12

Conread position: 457-670
Cow position: chr14:8898668-8898898 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 503-668
Cow position: chr14:17688277-17688443 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 508-662
Cow position: chr14:9513682-9513517 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 8, 25

Conread position: 508-663
Cow position: chr14:13579790-13579949 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 508-664
Cow position: chr14:30582688-30582529 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 79, 93

Conread position: 508-665
Cow position: chr14:33392491-33392330 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 508-668
Cow position: chr14:15274117-15273954 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 508-668
Cow position: chr14:16271893-16271729 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 508-668
Cow position: chr14:23255928-23255763 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 508-668
Cow position: chr14:27066321-27066159 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 27

Conread position: 508-668
Cow position: chr14:30594921-30594757 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 24

Conread position: 508-668
Cow position: chr14:32448387-32448553 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 508-668
Cow position: chr14:34998551-34998713 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 77, 46

Conread position: 508-668
Cow position: chr14:48252894-48252732 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 84, 112

Conread position: 508-668
Cow position: chr14:50112792-50112961 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 509-661
Cow position: chr14:22361435-22361584 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 124
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 37, 0

Conread position: 509-665
Cow position: chr14:45207994-45208155 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 509-668
Cow position: chr14:30761476-30761316 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 78, 28

Conread position: 509-668
Cow position: chr14:48600918-48600756 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 76, 11

Conread position: 509-670
Cow position: chr14:44380780-44380947 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 511-668
Cow position: chr14:12741609-12741451 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 76, 9

Conread position: 513-668
Cow position: chr14:47926516-47926675 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 43

Conread position: 516-668
Cow position: chr14:40343760-40343916 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 522-665
Cow position: chr14:46221524-46221671 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 533-668
Cow position: chr14:36908746-36908607 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 0

Show alignments to all cow chromosomes.