Cow genome map
Conread name: | Ss1.1-Ova1-OVRM10181H07.5 |
Conread position: | 157-668 |
Cow position: | chr21:26836780-26837301 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 27 |
Conread position: | 159-382 |
Cow position: | chr21:31639513-31639737 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 148 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 160-405 |
Cow position: | chr21:47942545-47942794 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 169 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 7, 178 |
Conread position: | 160-668 |
Cow position: | chr21:5018736-5019255 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 24 |
Conread position: | 160-668 |
Cow position: | chr21:39426668-39427178 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 345 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 12, 39 |
Conread position: | 161-668 |
Cow position: | chr21:34000479-33999960 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 330 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 80, 47 |
Conread position: | 169-385 |
Cow position: | chr21:2673086-2672868 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 153 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 37, 71 |
Conread position: | 169-656 |
Cow position: | chr21:1286617-1286103 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 348 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 16, 26 |
Conread position: | 169-668 |
Cow position: | chr21:27069354-27068851 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 329 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 40, 18 |
Conread position: | 170-327 |
Cow position: | chr21:21520219-21520372 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 119 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 170-403 |
Cow position: | chr21:40270065-40269826 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 162 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 17, 13 |
Conread position: | 170-414 |
Cow position: | chr21:33710756-33711006 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 174 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 170-414 |
Cow position: | chr21:38802044-38802293 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 175 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 50, 241 |
Conread position: | 170-583 |
Cow position: | chr21:6414417-6414000 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 266 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 50, 249 |
Conread position: | 170-652 |
Cow position: | chr21:19612367-19612856 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 319 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 26, 18 |
Conread position: | 170-665 |
Cow position: | chr21:11507221-11507717 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 333 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 50, 243 |
Conread position: | 170-668 |
Cow position: | chr21:2512456-2512962 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 17 |
Conread position: | 170-668 |
Cow position: | chr21:26635550-26635044 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 332 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 50, 241 |
Conread position: | 170-668 |
Cow position: | chr21:30563281-30563776 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 331 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 51, 13 |
Conread position: | 170-668 |
Cow position: | chr21:30597861-30597355 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 328 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 59, 13 |
Conread position: | 170-668 |
Cow position: | chr21:31514707-31514204 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 13 |
Conread position: | 171-429 |
Cow position: | chr21:2539480-2539205 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 185 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 171-668 |
Cow position: | chr21:47646940-47647446 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 323 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 58, 16 |
Conread position: | 173-665 |
Cow position: | chr21:36979285-36978794 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 101 |
Conread position: | 173-668 |
Cow position: | chr21:21701529-21702018 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 329 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 81, 31 |
Conread position: | 182-378 |
Cow position: | chr21:36979933-36980131 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 137 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 30, 160 |
Conread position: | 183-373 |
Cow position: | chr21:29257477-29257293 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 140 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 15, 119 |
Conread position: | 183-377 |
Cow position: | chr21:24085191-24084983 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 151 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 26, 196 |
Conread position: | 183-380 |
Cow position: | chr21:28985710-28985917 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 155 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 183-380 |
Cow position: | chr21:39089983-39090185 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 141 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 25, 133 |
Conread position: | 183-405 |
Cow position: | chr21:9893584-9893816 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 170 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 26, 102 |
Conread position: | 183-405 |
Cow position: | chr21:29003926-29003680 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 183 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 183-665 |
Cow position: | chr21:2903209-2903671 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 301 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 23, 201 |
Conread position: | 183-665 |
Cow position: | chr21:33710760-33711243 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 326 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 26, 85 |
Conread position: | 183-668 |
Cow position: | chr21:147535-148033 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 157 |
Conread position: | 183-668 |
Cow position: | chr21:31250623-31251104 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 314 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 63, 11 |
Conread position: | 183-668 |
Cow position: | chr21:34655447-34655937 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 308 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 48, 331 |
Conread position: | 183-668 |
Cow position: | chr21:37372846-37373339 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 164 |
Conread position: | 183-670 |
Cow position: | chr21:38023735-38024217 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 343 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 19, 130 |
Conread position: | 183-672 |
Cow position: | chr21:10568314-10568808 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 321 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 26, 156 |
Conread position: | 185-404 |
Cow position: | chr21:4588389-4588168 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 153 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 39, 82 |
Conread position: | 185-411 |
Cow position: | chr21:26649085-26648858 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 168 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 27, 83 |
Conread position: | 185-665 |
Cow position: | chr21:997222-996731 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 313 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 41, 214 |
Conread position: | 185-665 |
Cow position: | chr21:4565079-4565564 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 28 |
Conread position: | 185-668 |
Cow position: | chr21:2880211-2879715 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 327 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 24, 8 |
Conread position: | 186-668 |
Cow position: | chr21:28257040-28257531 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 218 |
Conread position: | 203-506 |
Cow position: | chr21:21025099-21025389 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 211 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 31, 126 |
Conread position: | 205-670 |
Cow position: | chr21:7591309-7591770 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 303 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 185, 27 |
Conread position: | 232-402 |
Cow position: | chr21:25815886-25815715 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 122 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 152, 162 |
Conread position: | 236-384 |
Cow position: | chr21:27150158-27150306 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 113 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 236-429 |
Cow position: | chr21:218686-218881 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 134 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 150, 85 |
Conread position: | 237-643 |
Cow position: | chr21:11157142-11156734 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 278 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 134, 105 |
Conread position: | 238-504 |
Cow position: | chr21:27567426-27567699 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 187 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 118, 72 |
Conread position: | 421-661 |
Cow position: | chr21:28986997-28987248 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 185 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 39, 76 |
Conread position: | 433-668 |
Cow position: | chr21:27285307-27285560 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 187 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 434-668 |
Cow position: | chr21:9865211-9864964 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 186 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 72, 184 |
Conread position: | 434-670 |
Cow position: | chr21:37149834-37150094 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 193 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 71, 135 |
Conread position: | 435-668 |
Cow position: | chr21:37124486-37124243 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 166 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 503-668 |
Cow position: | chr21:26401809-26401640 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 125 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 508-649 |
Cow position: | chr21:40683359-40683504 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 110 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 508-658 |
Cow position: | chr21:6967514-6967360 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 114 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 508-665 |
Cow position: | chr21:4096627-4096788 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 120 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 508-665 |
Cow position: | chr21:32897901-32897746 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 117 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 508-665 |
Cow position: | chr21:42915753-42915914 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 118 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 508-665 |
Cow position: | chr21:43564159-43563998 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 123 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 508-668 |
Cow position: | chr21:3780723-3780887 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 120 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 508-668 |
Cow position: | chr21:29003571-29003412 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 129 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 508-668 |
Cow position: | chr21:33318447-33318278 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 124 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 508-668 |
Cow position: | chr21:41797641-41797805 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 123 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 509-670 |
Cow position: | chr21:15249478-15249315 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 119 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 510-668 |
Cow position: | chr21:44764003-44763841 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 120 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 511-668 |
Cow position: | chr21:4036201-4036362 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 123 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 515-669 |
Cow position: | chr21:4716917-4717071 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 116 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 82, 7 |
Conread position: | 525-668 |
Cow position: | chr21:27149593-27149446 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 110 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 529-665 |
Cow position: | chr21:29949761-29949902 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 108 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 7, 0 |
Show alignments to all cow chromosomes.