Cow genome map

Conread name: Ss1.1-Ova1-OVRM10181H07.5

Conread position: 157-417
Cow position: chr22:38960528-38960794 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 179
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 104

Conread position: 158-384
Cow position: chr22:1268330-1268098 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 160-403
Cow position: chr22:37268592-37268841 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 167
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 239

Conread position: 160-414
Cow position: chr22:16202338-16202598 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 172
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 160-431
Cow position: chr22:31333623-31333346 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 186
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 28

Conread position: 160-661
Cow position: chr22:19142259-19141758 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 324
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 7, 24

Conread position: 160-665
Cow position: chr22:325760-325245 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 331
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 11, 231

Conread position: 160-665
Cow position: chr22:1281309-1280796 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 324
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 11, 119

Conread position: 160-665
Cow position: chr22:20239412-20238901 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 250

Conread position: 160-668
Cow position: chr22:1880229-1880747 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 335
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 259

Conread position: 160-668
Cow position: chr22:36860123-36859608 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 334
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 11, 175

Conread position: 160-668
Cow position: chr22:44492480-44492990 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 330
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 7, 20

Conread position: 169-384
Cow position: chr22:27308343-27308123 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 169-403
Cow position: chr22:8736917-8736675 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 168

Conread position: 169-408
Cow position: chr22:5936743-5936499 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 168
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 66, 128

Conread position: 170-352
Cow position: chr22:24951993-24952180 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 170-384
Cow position: chr22:10908400-10908181 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 170-414
Cow position: chr22:21034954-21034704 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 169
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 226

Conread position: 170-414
Cow position: chr22:32283246-32282996 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 170-587
Cow position: chr22:23752270-23751855 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 266
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 52, 141

Conread position: 170-663
Cow position: chr22:1323588-1324083 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 323
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 15, 91

Conread position: 170-667
Cow position: chr22:30653954-30654472 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 343
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 37, 6

Conread position: 170-668
Cow position: chr22:538546-539047 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 329
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 50, 8

Conread position: 170-668
Cow position: chr22:6022088-6022592 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 331
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 50, 244

Conread position: 170-668
Cow position: chr22:11803615-11803113 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 32

Conread position: 170-668
Cow position: chr22:15352309-15352804 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 328
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 54, 151

Conread position: 170-668
Cow position: chr22:30677278-30676772 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 314

Conread position: 170-668
Cow position: chr22:34169775-34170277 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 328
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 63, 13

Conread position: 170-668
Cow position: chr22:35670229-35669729 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 17

Conread position: 170-668
Cow position: chr22:37292238-37291735 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 13

Conread position: 170-668
Cow position: chr22:39468078-39467573 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 329
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 59, 13

Conread position: 170-668
Cow position: chr22:44368046-44367540 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 286

Conread position: 170-668
Cow position: chr22:45014787-45015287 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 329
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 201, 58

Conread position: 171-380
Cow position: chr22:46580281-46580067 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 8

Conread position: 171-668
Cow position: chr22:46585127-46584628 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 325
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 55, 16

Conread position: 173-665
Cow position: chr22:3272649-3272133 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 13

Conread position: 175-414
Cow position: chr22:15955582-15955342 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 162
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 60, 53

Conread position: 177-665
Cow position: chr22:559269-558769 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 328
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 13, 160

Conread position: 183-384
Cow position: chr22:21195058-21194843 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 183-414
Cow position: chr22:44397871-44398115 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 26, 144

Conread position: 183-431
Cow position: chr22:17327018-17326755 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 180
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 23, 160

Conread position: 183-665
Cow position: chr22:3276917-3276416 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 234

Conread position: 183-668
Cow position: chr22:296886-297388 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 229

Conread position: 183-668
Cow position: chr22:695056-695560 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 221

Conread position: 183-668
Cow position: chr22:21590863-21591364 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 331
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 26, 5

Conread position: 183-668
Cow position: chr22:42992615-42993112 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 333
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 29, 160

Conread position: 183-670
Cow position: chr22:290259-289756 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 212

Conread position: 183-670
Cow position: chr22:41474263-41473754 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 335
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 18, 41

Conread position: 184-668
Cow position: chr22:30129024-30129521 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 328
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 25, 294

Conread position: 184-668
Cow position: chr22:30146673-30147170 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 330
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 25, 295

Conread position: 185-504
Cow position: chr22:45582354-45582682 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 216
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 55, 30

Conread position: 185-665
Cow position: chr22:3803626-3804117 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 331
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 16, 10

Conread position: 185-668
Cow position: chr22:18028732-18029211 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 324
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 27, 87

Conread position: 188-383
Cow position: chr22:14824250-14824049 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 72

Conread position: 188-668
Cow position: chr22:44935411-44935902 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 320
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 47, 151

Conread position: 200-668
Cow position: chr22:15852884-15853357 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 312
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 35, 7

Conread position: 204-384
Cow position: chr22:3305124-3304948 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 204-669
Cow position: chr22:2563282-2562823 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 299
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 33, 152

Conread position: 205-658
Cow position: chr22:13773988-13774444 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 291
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 30, 247

Conread position: 231-660
Cow position: chr22:15279806-15280242 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 297
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 30, 37

Conread position: 231-668
Cow position: chr22:29037171-29037598 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 279
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 179, 34

Conread position: 234-380
Cow position: chr22:35905882-35905735 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 121, 0

Conread position: 234-414
Cow position: chr22:8664477-8664297 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 150, 19

Conread position: 234-670
Cow position: chr22:11807236-11806809 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 295
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 272, 121

Conread position: 236-414
Cow position: chr22:29011769-29011590 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 150, 0

Conread position: 236-415
Cow position: chr22:8120275-8120095 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 150, 0

Conread position: 236-665
Cow position: chr22:29499047-29499479 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 177

Conread position: 252-668
Cow position: chr22:28783637-28784055 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 268
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 72, 65

Conread position: 277-665
Cow position: chr22:18605253-18604861 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 261
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 63, 52

Conread position: 277-670
Cow position: chr22:48274791-48274402 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 254
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 104, 54

Conread position: 320-665
Cow position: chr22:34595343-34595679 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 243
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 71, 88

Conread position: 331-670
Cow position: chr22:36562843-36562494 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 257
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 57, 77

Conread position: 339-668
Cow position: chr22:1313395-1313064 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 223
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 51, 12

Conread position: 352-668
Cow position: chr22:36574399-36574075 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 56

Conread position: 427-672
Cow position: chr22:36560383-36560127 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 80, 67

Conread position: 433-665
Cow position: chr22:49717-49947 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 102, 61

Conread position: 433-670
Cow position: chr22:34601269-34601524 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 65, 22

Conread position: 504-668
Cow position: chr22:5314062-5314230 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 505-668
Cow position: chr22:26336974-26337136 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 79, 41

Conread position: 508-663
Cow position: chr22:36586041-36585888 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 58

Conread position: 508-665
Cow position: chr22:10548423-10548584 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 508-665
Cow position: chr22:10934453-10934292 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 19

Conread position: 508-665
Cow position: chr22:36545157-36545010 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 508-668
Cow position: chr22:1267975-1267823 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 508-668
Cow position: chr22:2849813-2849653 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 46

Conread position: 508-668
Cow position: chr22:5932292-5932130 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 13

Conread position: 508-668
Cow position: chr22:6333616-6333777 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 508-668
Cow position: chr22:14884224-14884387 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 24

Conread position: 508-668
Cow position: chr22:15310180-15310015 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 508-668
Cow position: chr22:21194441-21194276 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 508-668
Cow position: chr22:25969640-25969479 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 79, 91

Conread position: 508-668
Cow position: chr22:29853631-29853795 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 508-668
Cow position: chr22:32204843-32205005 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 79, 24

Conread position: 508-668
Cow position: chr22:35905395-35905230 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 508-669
Cow position: chr22:11034159-11034322 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 12

Conread position: 508-670
Cow position: chr22:41242160-41242321 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 130
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 86, 0

Conread position: 510-668
Cow position: chr22:31333271-31333109 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 511-670
Cow position: chr22:44478499-44478658 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 9

Conread position: 514-668
Cow position: chr22:41847768-41847610 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 515-670
Cow position: chr22:23430106-23429947 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 523-668
Cow position: chr22:980077-980226 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 62, 0

Show alignments to all cow chromosomes.