Cow genome map
Conread name: | Ss1.1-Ova1-OVRM10181H07.5 |
Conread position: | 134-509 |
Cow position: | chr25:12757675-12757312 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 254 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 24, 101 |
Conread position: | 160-356 |
Cow position: | chr25:21902508-21902710 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 151 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 14, 35 |
Conread position: | 160-414 |
Cow position: | chr25:13062237-13061976 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 180 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 160-668 |
Cow position: | chr25:18178159-18178679 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 222 |
Conread position: | 161-414 |
Cow position: | chr25:35588860-35588602 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 171 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 46, 11 |
Conread position: | 169-668 |
Cow position: | chr25:11041824-11042334 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 347 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 14, 125 |
Conread position: | 169-668 |
Cow position: | chr25:18888271-18887754 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 339 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 24, 175 |
Conread position: | 169-670 |
Cow position: | chr25:11931318-11930807 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 333 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 40, 354 |
Conread position: | 170-379 |
Cow position: | chr25:32581006-32581220 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 153 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 170-414 |
Cow position: | chr25:13782531-13782781 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 171 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 31, 13 |
Conread position: | 170-414 |
Cow position: | chr25:20346499-20346249 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 174 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 170-668 |
Cow position: | chr25:12941187-12940684 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 13 |
Conread position: | 170-668 |
Cow position: | chr25:13693184-13692678 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 241 |
Conread position: | 170-668 |
Cow position: | chr25:17588078-17587578 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 13 |
Conread position: | 170-668 |
Cow position: | chr25:18305622-18306136 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 334 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 55, 37 |
Conread position: | 170-668 |
Cow position: | chr25:19339115-19338610 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 138 |
Conread position: | 170-668 |
Cow position: | chr25:20631108-20631613 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 331 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 17, 13 |
Conread position: | 170-668 |
Cow position: | chr25:22149025-22149543 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 13 |
Conread position: | 170-668 |
Cow position: | chr25:25508190-25508692 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 329 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 17, 165 |
Conread position: | 175-402 |
Cow position: | chr25:20097902-20098138 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 174 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 10, 173 |
Conread position: | 178-400 |
Cow position: | chr25:18273298-18273065 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 162 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 34, 171 |
Conread position: | 179-502 |
Cow position: | chr25:9393134-9393473 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 239 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 31, 56 |
Conread position: | 183-411 |
Cow position: | chr25:18486077-18485833 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 168 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 183-504 |
Cow position: | chr25:30266979-30267324 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 233 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 26, 66 |
Conread position: | 183-665 |
Cow position: | chr25:19922032-19922533 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 313 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 26, 241 |
Conread position: | 183-668 |
Cow position: | chr25:27021107-27020608 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 5 |
Conread position: | 183-668 |
Cow position: | chr25:34345508-34345016 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 314 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 29, 152 |
Conread position: | 185-384 |
Cow position: | chr25:34238730-34238524 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 148 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 50, 88 |
Conread position: | 187-378 |
Cow position: | chr25:19408298-19408499 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 145 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 188-670 |
Cow position: | chr25:18251434-18250961 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 308 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 15, 209 |
Conread position: | 203-668 |
Cow position: | chr25:24215979-24215512 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 314 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 44, 36 |
Conread position: | 204-670 |
Cow position: | chr25:2368517-2368986 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 316 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 25, 187 |
Conread position: | 231-668 |
Cow position: | chr25:16924852-16924412 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 290 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 155, 135 |
Conread position: | 234-403 |
Cow position: | chr25:17559012-17558842 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 126 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 156, 0 |
Conread position: | 237-435 |
Cow position: | chr25:4532953-4532758 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 138 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 118, 144 |
Conread position: | 307-670 |
Cow position: | chr25:17656029-17656389 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 240 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 78, 48 |
Conread position: | 433-670 |
Cow position: | chr25:34238498-34238256 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 162 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 76, 58 |
Conread position: | 508-660 |
Cow position: | chr25:16448838-16448682 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 128 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 508-665 |
Cow position: | chr25:14538102-14537941 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 123 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 508-668 |
Cow position: | chr25:9393773-9393932 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 134 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 508-668 |
Cow position: | chr25:13782873-13783036 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 124 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 28, 24 |
Conread position: | 508-668 |
Cow position: | chr25:13958633-13958797 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 121 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 508-668 |
Cow position: | chr25:26455312-26455475 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 124 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 77, 12 |
Conread position: | 508-668 |
Cow position: | chr25:28861434-28861597 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 121 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 84, 61 |
Conread position: | 508-668 |
Cow position: | chr25:32579073-32578910 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 123 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 79, 14 |
Conread position: | 508-668 |
Cow position: | chr25:34506259-34506095 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 123 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 509-668 |
Cow position: | chr25:18191829-18191666 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 124 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 511-663 |
Cow position: | chr25:18451404-18451561 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 115 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 512-670 |
Cow position: | chr25:35588505-35588344 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 123 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 26, 16 |
Conread position: | 523-670 |
Cow position: | chr25:10297170-10297317 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 111 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.