Cow genome map

Conread name: Ss1.1-Ova1-OVRM10181H07.5

Conread position: 134-509
Cow position: chr25:12757675-12757312 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 254
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 101

Conread position: 160-356
Cow position: chr25:21902508-21902710 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 14, 35

Conread position: 160-414
Cow position: chr25:13062237-13061976 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 160-668
Cow position: chr25:18178159-18178679 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 222

Conread position: 161-414
Cow position: chr25:35588860-35588602 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 171
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 11

Conread position: 169-668
Cow position: chr25:11041824-11042334 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 347
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 14, 125

Conread position: 169-668
Cow position: chr25:18888271-18887754 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 339
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 24, 175

Conread position: 169-670
Cow position: chr25:11931318-11930807 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 333
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 40, 354

Conread position: 170-379
Cow position: chr25:32581006-32581220 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 170-414
Cow position: chr25:13782531-13782781 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 31, 13

Conread position: 170-414
Cow position: chr25:20346499-20346249 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 170-668
Cow position: chr25:12941187-12940684 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 13

Conread position: 170-668
Cow position: chr25:13693184-13692678 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 241

Conread position: 170-668
Cow position: chr25:17588078-17587578 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 13

Conread position: 170-668
Cow position: chr25:18305622-18306136 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 334
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 55, 37

Conread position: 170-668
Cow position: chr25:19339115-19338610 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 138

Conread position: 170-668
Cow position: chr25:20631108-20631613 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 331
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 17, 13

Conread position: 170-668
Cow position: chr25:22149025-22149543 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 13

Conread position: 170-668
Cow position: chr25:25508190-25508692 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 329
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 17, 165

Conread position: 175-402
Cow position: chr25:20097902-20098138 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 10, 173

Conread position: 178-400
Cow position: chr25:18273298-18273065 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 171

Conread position: 179-502
Cow position: chr25:9393134-9393473 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 239
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 31, 56

Conread position: 183-411
Cow position: chr25:18486077-18485833 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 183-504
Cow position: chr25:30266979-30267324 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 233
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 26, 66

Conread position: 183-665
Cow position: chr25:19922032-19922533 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 313
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 26, 241

Conread position: 183-668
Cow position: chr25:27021107-27020608 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 5

Conread position: 183-668
Cow position: chr25:34345508-34345016 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 314
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 29, 152

Conread position: 185-384
Cow position: chr25:34238730-34238524 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 88

Conread position: 187-378
Cow position: chr25:19408298-19408499 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 188-670
Cow position: chr25:18251434-18250961 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 308
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 15, 209

Conread position: 203-668
Cow position: chr25:24215979-24215512 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 314
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 44, 36

Conread position: 204-670
Cow position: chr25:2368517-2368986 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 316
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 25, 187

Conread position: 231-668
Cow position: chr25:16924852-16924412 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 290
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 155, 135

Conread position: 234-403
Cow position: chr25:17559012-17558842 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 156, 0

Conread position: 237-435
Cow position: chr25:4532953-4532758 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 118, 144

Conread position: 307-670
Cow position: chr25:17656029-17656389 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 240
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 78, 48

Conread position: 433-670
Cow position: chr25:34238498-34238256 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 162
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 76, 58

Conread position: 508-660
Cow position: chr25:16448838-16448682 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 128
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 79, 0

Conread position: 508-665
Cow position: chr25:14538102-14537941 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 508-668
Cow position: chr25:9393773-9393932 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 134
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 51, 0

Conread position: 508-668
Cow position: chr25:13782873-13783036 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 24

Conread position: 508-668
Cow position: chr25:13958633-13958797 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 508-668
Cow position: chr25:26455312-26455475 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 77, 12

Conread position: 508-668
Cow position: chr25:28861434-28861597 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 84, 61

Conread position: 508-668
Cow position: chr25:32579073-32578910 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 79, 14

Conread position: 508-668
Cow position: chr25:34506259-34506095 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 509-668
Cow position: chr25:18191829-18191666 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 511-663
Cow position: chr25:18451404-18451561 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 512-670
Cow position: chr25:35588505-35588344 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 16

Conread position: 523-670
Cow position: chr25:10297170-10297317 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.