Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10181H07.5 |
| Conread position: | 150-380 |
| Cow position: | chr26:35336717-35336481 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 160-376 |
| Cow position: | chr26:28373745-28373523 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 160-403 |
| Cow position: | chr26:2200113-2200362 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 60, 239 |
| Conread position: | 160-584 |
| Cow position: | chr26:3029355-3028926 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 11, 252 |
| Conread position: | 160-668 |
| Cow position: | chr26:30784231-30784745 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 24 |
| Conread position: | 169-668 |
| Cow position: | chr26:9113375-9113878 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 242 |
| Conread position: | 170-414 |
| Cow position: | chr26:35369431-35369681 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 170-668 |
| Cow position: | chr26:8871328-8871834 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 292 |
| Conread position: | 170-668 |
| Cow position: | chr26:12587059-12586553 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 341 |
| Conread position: | 170-668 |
| Cow position: | chr26:30587875-30587372 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 309 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 99, 13 |
| Conread position: | 171-625 |
| Cow position: | chr26:33148379-33147917 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 296 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 49, 197 |
| Conread position: | 174-387 |
| Cow position: | chr26:34029472-34029682 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 18, 31 |
| Conread position: | 175-668 |
| Cow position: | chr26:2350698-2350198 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 331 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 12, 95 |
| Conread position: | 183-400 |
| Cow position: | chr26:8086598-8086830 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 183-414 |
| Cow position: | chr26:14895445-14895690 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 123 |
| Conread position: | 183-665 |
| Cow position: | chr26:34013159-34013660 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 326 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 23, 221 |
| Conread position: | 183-668 |
| Cow position: | chr26:19350015-19349520 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 161 |
| Conread position: | 188-668 |
| Cow position: | chr26:5676639-5677132 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 325 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 47, 151 |
| Conread position: | 191-378 |
| Cow position: | chr26:20265416-20265607 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 191-384 |
| Cow position: | chr26:18853728-18853926 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 204-668 |
| Cow position: | chr26:17395376-17394915 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 309 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 136, 30 |
| Conread position: | 227-384 |
| Cow position: | chr26:16725694-16725852 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 231-391 |
| Cow position: | chr26:8911248-8911087 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 231-663 |
| Cow position: | chr26:8282262-8281835 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 295 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 276, 134 |
| Conread position: | 235-403 |
| Cow position: | chr26:4603596-4603427 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 235-670 |
| Cow position: | chr26:21825118-21824679 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 149, 98 |
| Conread position: | 237-414 |
| Cow position: | chr26:16478894-16479067 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 254-504 |
| Cow position: | chr26:17322219-17322456 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 40, 84 |
| Conread position: | 302-668 |
| Cow position: | chr26:9560955-9560586 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 431-668 |
| Cow position: | chr26:6081669-6081408 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 434-663 |
| Cow position: | chr26:9842669-9842423 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 27, 34 |
| Conread position: | 503-668 |
| Cow position: | chr26:17325975-17326144 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 139 |
| Conread position: | 508-665 |
| Cow position: | chr26:898226-898386 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 77, 129 |
| Conread position: | 508-665 |
| Cow position: | chr26:3250729-3250568 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 508-665 |
| Cow position: | chr26:6817480-6817641 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 508-665 |
| Cow position: | chr26:14506456-14506295 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 508-668 |
| Cow position: | chr26:577473-577309 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 508-668 |
| Cow position: | chr26:3226253-3226089 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 508-668 |
| Cow position: | chr26:4327610-4327447 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 508-668 |
| Cow position: | chr26:14895779-14895943 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 508-668 |
| Cow position: | chr26:23888229-23888390 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 511-665 |
| Cow position: | chr26:33934153-33934308 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 77, 44 |
| Conread position: | 533-663 |
| Cow position: | chr26:13801056-13801183 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
Show alignments to all cow chromosomes.