Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10181H07.5 |
| Conread position: | 159-414 |
| Cow position: | chr3:46503900-46504160 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 8, 27 |
| Conread position: | 160-380 |
| Cow position: | chr3:2367987-2367762 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 11, 138 |
| Conread position: | 160-384 |
| Cow position: | chr3:56327458-56327687 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 7, 20 |
| Conread position: | 160-414 |
| Cow position: | chr3:31416366-31416627 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 7, 109 |
| Conread position: | 160-668 |
| Cow position: | chr3:18860766-18861288 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 253 |
| Conread position: | 160-668 |
| Cow position: | chr3:36863108-36862590 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 339 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 11, 263 |
| Conread position: | 160-668 |
| Cow position: | chr3:53516950-53517476 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 349 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 7, 184 |
| Conread position: | 166-402 |
| Cow position: | chr3:16076702-16076946 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 45, 232 |
| Conread position: | 169-367 |
| Cow position: | chr3:33843470-33843267 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 62, 16 |
| Conread position: | 169-380 |
| Cow position: | chr3:67769171-67769384 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 55, 16 |
| Conread position: | 169-403 |
| Cow position: | chr3:58948887-58949129 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 40, 13 |
| Conread position: | 169-407 |
| Cow position: | chr3:45034099-45034343 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 51, 230 |
| Conread position: | 169-431 |
| Cow position: | chr3:56146663-56146932 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 40, 166 |
| Conread position: | 169-665 |
| Cow position: | chr3:24644573-24645075 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 34 |
| Conread position: | 169-665 |
| Cow position: | chr3:50916694-50917196 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 330 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 40, 177 |
| Conread position: | 169-668 |
| Cow position: | chr3:7247893-7248398 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 330 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 18, 204 |
| Conread position: | 169-668 |
| Cow position: | chr3:19799812-19799316 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 324 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 217, 18 |
| Conread position: | 170-378 |
| Cow position: | chr3:72671179-72670967 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 170-384 |
| Cow position: | chr3:1742692-1742911 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 170-384 |
| Cow position: | chr3:27919788-27920007 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 170-400 |
| Cow position: | chr3:47080049-47079813 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 170-414 |
| Cow position: | chr3:3840156-3839907 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 211 |
| Conread position: | 170-414 |
| Cow position: | chr3:51364425-51364178 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 40, 33 |
| Conread position: | 170-610 |
| Cow position: | chr3:2918830-2919273 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 282 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 50, 127 |
| Conread position: | 170-665 |
| Cow position: | chr3:4287450-4287948 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 327 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 50, 99 |
| Conread position: | 170-665 |
| Cow position: | chr3:29329929-29329426 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 241 |
| Conread position: | 170-668 |
| Cow position: | chr3:2870149-2870655 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 242 |
| Conread position: | 170-668 |
| Cow position: | chr3:6783728-6784232 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 244 |
| Conread position: | 170-668 |
| Cow position: | chr3:7157359-7156852 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 253 |
| Conread position: | 170-668 |
| Cow position: | chr3:18812859-18813366 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 326 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 62, 158 |
| Conread position: | 170-668 |
| Cow position: | chr3:19945605-19946113 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 326 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 39, 233 |
| Conread position: | 170-668 |
| Cow position: | chr3:23206513-23206009 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 322 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 17, 13 |
| Conread position: | 170-668 |
| Cow position: | chr3:29575763-29575254 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 326 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 49, 341 |
| Conread position: | 170-668 |
| Cow position: | chr3:30315909-30316415 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 315 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 59, 162 |
| Conread position: | 170-668 |
| Cow position: | chr3:32621681-32621179 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 330 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 50, 128 |
| Conread position: | 170-668 |
| Cow position: | chr3:37970407-37970913 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 286 |
| Conread position: | 170-668 |
| Cow position: | chr3:40338787-40338281 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 292 |
| Conread position: | 170-668 |
| Cow position: | chr3:41209241-41208746 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 216 |
| Conread position: | 170-668 |
| Cow position: | chr3:49136204-49135698 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 333 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 17, 13 |
| Conread position: | 170-668 |
| Cow position: | chr3:56295547-56296052 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 27 |
| Conread position: | 170-668 |
| Cow position: | chr3:69932473-69931969 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 325 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 26, 13 |
| Conread position: | 170-668 |
| Cow position: | chr3:74058887-74059392 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 9 |
| Conread position: | 171-665 |
| Cow position: | chr3:57483361-57482861 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 326 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 58, 24 |
| Conread position: | 171-668 |
| Cow position: | chr3:49543845-49543345 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 320 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 62, 32 |
| Conread position: | 171-668 |
| Cow position: | chr3:72631425-72631920 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 316 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 58, 26 |
| Conread position: | 172-431 |
| Cow position: | chr3:42448479-42448743 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 15 |
| Conread position: | 172-665 |
| Cow position: | chr3:19720295-19719795 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 11 |
| Conread position: | 174-380 |
| Cow position: | chr3:20382392-20382612 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 175-403 |
| Cow position: | chr3:48229153-48228916 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 61, 211 |
| Conread position: | 177-668 |
| Cow position: | chr3:27864538-27865037 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 329 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 20, 225 |
| Conread position: | 179-438 |
| Cow position: | chr3:67164646-67164913 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 56, 84 |
| Conread position: | 180-668 |
| Cow position: | chr3:19880011-19880510 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 322 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 63, 242 |
| Conread position: | 182-401 |
| Cow position: | chr3:18943386-18943614 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 28, 85 |
| Conread position: | 182-414 |
| Cow position: | chr3:36877288-36877050 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 27, 81 |
| Conread position: | 183-382 |
| Cow position: | chr3:19889282-19889083 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 43, 156 |
| Conread position: | 183-395 |
| Cow position: | chr3:47087661-47087874 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 43, 131 |
| Conread position: | 183-403 |
| Cow position: | chr3:52653296-52653063 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 183-403 |
| Cow position: | chr3:68872390-68872155 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 225 |
| Conread position: | 183-414 |
| Cow position: | chr3:66889602-66889359 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 183-506 |
| Cow position: | chr3:46017419-46017721 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 99, 49 |
| Conread position: | 183-631 |
| Cow position: | chr3:37626362-37626807 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 29, 76 |
| Conread position: | 183-654 |
| Cow position: | chr3:56146668-56147156 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 325 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 26, 86 |
| Conread position: | 183-663 |
| Cow position: | chr3:64026770-64026276 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 332 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 26, 142 |
| Conread position: | 183-665 |
| Cow position: | chr3:34505979-34505489 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 228 |
| Conread position: | 183-665 |
| Cow position: | chr3:74851763-74851285 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 316 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 192, 37 |
| Conread position: | 183-668 |
| Cow position: | chr3:595501-595993 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 323 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 26, 10 |
| Conread position: | 183-668 |
| Cow position: | chr3:2709502-2709003 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 330 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 29, 152 |
| Conread position: | 183-668 |
| Cow position: | chr3:16224250-16224759 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 5 |
| Conread position: | 183-668 |
| Cow position: | chr3:21181328-21180832 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 325 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 50, 25 |
| Conread position: | 183-668 |
| Cow position: | chr3:34029556-34029056 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 327 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 26, 160 |
| Conread position: | 183-668 |
| Cow position: | chr3:40824757-40825256 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 329 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 26, 145 |
| Conread position: | 183-668 |
| Cow position: | chr3:44925427-44925930 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 282 |
| Conread position: | 183-668 |
| Cow position: | chr3:68698608-68698109 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 219 |
| Conread position: | 184-509 |
| Cow position: | chr3:84197185-84197515 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 55, 167 |
| Conread position: | 184-668 |
| Cow position: | chr3:19755596-19755096 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 327 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 25, 143 |
| Conread position: | 185-363 |
| Cow position: | chr3:64685701-64685517 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 24, 58 |
| Conread position: | 185-421 |
| Cow position: | chr3:56100318-56100073 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 50, 39 |
| Conread position: | 185-613 |
| Cow position: | chr3:32200384-32200825 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 283 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 27, 214 |
| Conread position: | 185-670 |
| Cow position: | chr3:54291212-54290720 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 30 |
| Conread position: | 187-652 |
| Cow position: | chr3:15054334-15053860 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 42 |
| Conread position: | 188-414 |
| Cow position: | chr3:40103846-40103617 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 39, 185 |
| Conread position: | 188-509 |
| Cow position: | chr3:70888649-70888970 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 230 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 198, 48 |
| Conread position: | 189-607 |
| Cow position: | chr3:3524382-3524817 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 211 |
| Conread position: | 189-668 |
| Cow position: | chr3:4736542-4736068 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 318 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 32, 87 |
| Conread position: | 200-668 |
| Cow position: | chr3:43191901-43191425 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 307 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 32, 134 |
| Conread position: | 202-504 |
| Cow position: | chr3:42051212-42050901 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 14, 135 |
| Conread position: | 204-378 |
| Cow position: | chr3:63002160-63001988 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 204-669 |
| Cow position: | chr3:63240843-63240374 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 304 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 182, 37 |
| Conread position: | 205-665 |
| Cow position: | chr3:24444709-24444239 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 308 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 30, 121 |
| Conread position: | 205-670 |
| Cow position: | chr3:33634642-33635107 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 94 |
| Conread position: | 207-378 |
| Cow position: | chr3:42053276-42053105 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 40 |
| Conread position: | 208-403 |
| Cow position: | chr3:2906359-2906157 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 231-438 |
| Cow position: | chr3:34090061-34089853 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 148, 162 |
| Conread position: | 231-668 |
| Cow position: | chr3:6687217-6687661 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 289 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 158, 39 |
| Conread position: | 231-670 |
| Cow position: | chr3:65208612-65209045 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 289 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 238, 135 |
| Conread position: | 232-402 |
| Cow position: | chr3:8438468-8438639 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 232-668 |
| Cow position: | chr3:53412558-53412968 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 168, 30 |
| Conread position: | 236-396 |
| Cow position: | chr3:56338841-56338680 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 105, 93 |
| Conread position: | 236-652 |
| Cow position: | chr3:51857259-51856840 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 150, 170 |
| Conread position: | 236-668 |
| Cow position: | chr3:64652042-64652472 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 286 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 101, 19 |
| Conread position: | 237-668 |
| Cow position: | chr3:68891138-68890710 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 171 |
| Conread position: | 242-402 |
| Cow position: | chr3:80480301-80480142 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 144, 14 |
| Conread position: | 245-414 |
| Cow position: | chr3:19940371-19940539 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 149, 114 |
| Conread position: | 266-668 |
| Cow position: | chr3:59863024-59863429 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 75, 63 |
| Conread position: | 278-667 |
| Cow position: | chr3:38868061-38868457 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 62, 51 |
| Conread position: | 280-670 |
| Cow position: | chr3:29580085-29580475 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 216, 106 |
| Conread position: | 417-668 |
| Cow position: | chr3:31385332-31385090 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 32, 23 |
| Conread position: | 428-668 |
| Cow position: | chr3:19940531-19940791 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 433-668 |
| Cow position: | chr3:7478308-7478060 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 433-668 |
| Cow position: | chr3:32704808-32704567 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 435-631 |
| Cow position: | chr3:2367730-2367525 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 435-665 |
| Cow position: | chr3:28669696-28669945 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 443-670 |
| Cow position: | chr3:71141187-71140951 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 506-665 |
| Cow position: | chr3:3783443-3783606 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 506-665 |
| Cow position: | chr3:3787303-3787466 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 508-662 |
| Cow position: | chr3:2853699-2853543 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 86, 12 |
| Conread position: | 508-665 |
| Cow position: | chr3:2508982-2508823 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 508-665 |
| Cow position: | chr3:26683296-26683457 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 508-665 |
| Cow position: | chr3:26722884-26723043 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 508-665 |
| Cow position: | chr3:46504252-46504413 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 508-665 |
| Cow position: | chr3:54740657-54740496 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 508-665 |
| Cow position: | chr3:58784453-58784292 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 508-668 |
| Cow position: | chr3:1886724-1886559 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 508-668 |
| Cow position: | chr3:3839815-3839659 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 79, 115 |
| Conread position: | 508-668 |
| Cow position: | chr3:3937562-3937726 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 77, 131 |
| Conread position: | 508-668 |
| Cow position: | chr3:18760696-18760532 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 508-668 |
| Cow position: | chr3:19888958-19888798 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 79, 123 |
| Conread position: | 508-668 |
| Cow position: | chr3:29190373-29190208 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 508-668 |
| Cow position: | chr3:30330440-30330276 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 508-668 |
| Cow position: | chr3:30617221-30617061 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 79, 12 |
| Conread position: | 508-668 |
| Cow position: | chr3:39024575-39024739 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 508-668 |
| Cow position: | chr3:56327822-56327984 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 79, 20 |
| Conread position: | 508-668 |
| Cow position: | chr3:64685400-64685236 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 79, 93 |
| Conread position: | 508-668 |
| Cow position: | chr3:64824027-64824187 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 508-668 |
| Cow position: | chr3:66889265-66889102 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 79, 93 |
| Conread position: | 508-668 |
| Cow position: | chr3:72670852-72670690 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 84, 64 |
| Conread position: | 508-668 |
| Cow position: | chr3:77425406-77425570 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 508-670 |
| Cow position: | chr3:54654485-54654651 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 509-665 |
| Cow position: | chr3:41081869-41082029 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 509-665 |
| Cow position: | chr3:48844698-48844858 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 509-668 |
| Cow position: | chr3:26744155-26743992 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 510-665 |
| Cow position: | chr3:45976202-45976360 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 511-670 |
| Cow position: | chr3:24587848-24587688 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 80, 12 |
| Conread position: | 512-665 |
| Cow position: | chr3:2919325-2919482 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 512-670 |
| Cow position: | chr3:53049125-53048964 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 107 |
| Conread position: | 514-668 |
| Cow position: | chr3:20382814-20382972 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 515-670 |
| Cow position: | chr3:54864277-54864123 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 525-658 |
| Cow position: | chr3:14861933-14862069 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 59, 12 |
| Conread position: | 547-670 |
| Cow position: | chr3:3982372-3982497 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
Show alignments to all cow chromosomes.