Cow genome map

Conread name: Ss1.1-Ova1-OVRM10181H07.5

Conread position: 152-494
Cow position: chr4:41978249-41977914 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 230
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 15, 8

Conread position: 160-384
Cow position: chr4:3126963-3127194 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 7, 0

Conread position: 160-414
Cow position: chr4:1952413-1952153 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 19

Conread position: 160-664
Cow position: chr4:1049106-1048597 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 328
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 7, 20

Conread position: 165-665
Cow position: chr4:13958332-13958831 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 231

Conread position: 169-414
Cow position: chr4:34178086-34177835 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 14

Conread position: 169-494
Cow position: chr4:21258311-21258647 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 233
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 66, 176

Conread position: 169-638
Cow position: chr4:14755517-14755037 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 310
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 40, 250

Conread position: 169-668
Cow position: chr4:17924808-17924291 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 341
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 13, 175

Conread position: 170-333
Cow position: chr4:45106630-45106798 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 170-364
Cow position: chr4:28653328-28653132 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 13

Conread position: 170-384
Cow position: chr4:18338018-18338237 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 50, 161

Conread position: 170-384
Cow position: chr4:41955927-41956146 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 170-664
Cow position: chr4:17092698-17092201 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 177

Conread position: 170-665
Cow position: chr4:5881323-5881830 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 334
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 52, 100

Conread position: 170-665
Cow position: chr4:14386985-14387483 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 243

Conread position: 170-665
Cow position: chr4:17502167-17501664 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 249

Conread position: 170-665
Cow position: chr4:30472377-30472880 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 238

Conread position: 170-665
Cow position: chr4:33071670-33071173 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 322
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 17, 13

Conread position: 170-665
Cow position: chr4:36897540-36898040 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 332
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 17, 8

Conread position: 170-665
Cow position: chr4:43318471-43317969 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 13

Conread position: 170-668
Cow position: chr4:99054-98543 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 202

Conread position: 170-668
Cow position: chr4:160323-160827 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 324
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 14, 325

Conread position: 170-668
Cow position: chr4:604794-605286 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 241

Conread position: 170-668
Cow position: chr4:1929471-1928969 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 27

Conread position: 170-668
Cow position: chr4:3356769-3356264 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 325
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 59, 287

Conread position: 170-668
Cow position: chr4:4417221-4417720 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 324
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 50, 119

Conread position: 170-668
Cow position: chr4:5443661-5443155 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 248

Conread position: 170-668
Cow position: chr4:6567543-6568049 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 286

Conread position: 170-668
Cow position: chr4:13494494-13495002 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 334
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 59, 13

Conread position: 170-668
Cow position: chr4:16060443-16060945 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 323
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 51, 97

Conread position: 170-668
Cow position: chr4:16639774-16640278 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 322
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 62, 164

Conread position: 170-668
Cow position: chr4:33022474-33021969 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 230

Conread position: 170-668
Cow position: chr4:41960064-41960570 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 173

Conread position: 170-668
Cow position: chr4:44780056-44779556 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 161

Conread position: 171-656
Cow position: chr4:9355544-9356037 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 240

Conread position: 172-665
Cow position: chr4:25598319-25597819 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 326
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 15, 7

Conread position: 172-668
Cow position: chr4:6865341-6864838 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 111

Conread position: 173-668
Cow position: chr4:32213339-32213843 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 218

Conread position: 173-668
Cow position: chr4:48028021-48028522 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 327
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 11, 168

Conread position: 178-506
Cow position: chr4:52962975-52962653 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 223
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 35

Conread position: 179-668
Cow position: chr4:18102491-18101992 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 186

Conread position: 183-401
Cow position: chr4:20067555-20067326 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 220

Conread position: 183-403
Cow position: chr4:19094152-19094380 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 40, 16

Conread position: 183-403
Cow position: chr4:67682365-67682600 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 160

Conread position: 183-411
Cow position: chr4:964131-963906 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 57

Conread position: 183-631
Cow position: chr4:57985160-57985620 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 304
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 26, 160

Conread position: 183-665
Cow position: chr4:34221912-34222410 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 182

Conread position: 183-668
Cow position: chr4:18423348-18422855 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 336
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 26, 56

Conread position: 183-668
Cow position: chr4:33494723-33495226 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 328
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 26, 160

Conread position: 183-670
Cow position: chr4:28832888-28833396 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 329
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 24, 72

Conread position: 184-665
Cow position: chr4:65916445-65916918 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 115

Conread position: 184-668
Cow position: chr4:43882279-43882778 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 327
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 51, 24

Conread position: 185-376
Cow position: chr4:13871150-13871344 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 27, 8

Conread position: 185-665
Cow position: chr4:50975796-50976277 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 8

Conread position: 185-668
Cow position: chr4:49716949-49717445 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 8

Conread position: 185-670
Cow position: chr4:8702733-8703225 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 316
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 19, 8

Conread position: 188-668
Cow position: chr4:26876610-26876118 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 318
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 21, 123

Conread position: 188-668
Cow position: chr4:60045761-60045271 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 318
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 185

Conread position: 193-403
Cow position: chr4:20604871-20605085 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 18, 126

Conread position: 194-414
Cow position: chr4:17244295-17244520 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 204-668
Cow position: chr4:530623-531088 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 9

Conread position: 204-668
Cow position: chr4:44899481-44899941 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 58

Conread position: 204-670
Cow position: chr4:6206807-6207269 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 311
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 61

Conread position: 208-668
Cow position: chr4:27335142-27335608 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 182

Conread position: 209-414
Cow position: chr4:827413-827622 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 211-403
Cow position: chr4:14139584-14139774 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 168

Conread position: 213-414
Cow position: chr4:22742638-22742843 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 19, 119

Conread position: 231-367
Cow position: chr4:27851480-27851616 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 231-380
Cow position: chr4:37988569-37988717 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 135, 0

Conread position: 232-380
Cow position: chr4:61986044-61985896 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 234-402
Cow position: chr4:47522591-47522751 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 150, 94

Conread position: 235-672
Cow position: chr4:19005099-19004657 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 229

Conread position: 236-639
Cow position: chr4:20236163-20235751 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 263
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 150, 178

Conread position: 236-665
Cow position: chr4:6267956-6267525 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 285
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 150, 233

Conread position: 238-668
Cow position: chr4:10882785-10883207 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 291
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 96, 91

Conread position: 241-665
Cow position: chr4:20241759-20242192 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 278
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 149, 176

Conread position: 263-404
Cow position: chr4:1366745-1366604 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 7, 67

Conread position: 273-403
Cow position: chr4:4178653-4178781 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 113, 79

Conread position: 305-668
Cow position: chr4:43898238-43897867 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 243
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 12, 18

Conread position: 432-670
Cow position: chr4:20605088-20605322 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 174, 83

Conread position: 508-665
Cow position: chr4:827714-827875 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 508-665
Cow position: chr4:1366504-1366345 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 508-665
Cow position: chr4:7730947-7730786 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 508-665
Cow position: chr4:15460759-15460598 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 508-665
Cow position: chr4:27655078-27654917 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 508-665
Cow position: chr4:28652989-28652828 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 508-665
Cow position: chr4:34622292-34622137 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 508-665
Cow position: chr4:65222254-65222093 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 508-668
Cow position: chr4:3127316-3127481 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 508-668
Cow position: chr4:7509219-7509383 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 76, 0

Conread position: 508-668
Cow position: chr4:8670826-8670992 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 12

Conread position: 508-668
Cow position: chr4:12239728-12239570 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 508-668
Cow position: chr4:12607394-12607229 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 508-668
Cow position: chr4:16361701-16361866 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 508-668
Cow position: chr4:18338359-18338523 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 508-668
Cow position: chr4:28149916-28150080 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 508-668
Cow position: chr4:41956269-41956434 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 508-670
Cow position: chr4:4179691-4179856 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 508-670
Cow position: chr4:19094480-19094640 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 76, 13

Conread position: 508-670
Cow position: chr4:25912941-25913106 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 52

Conread position: 511-668
Cow position: chr4:493183-493026 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 511-670
Cow position: chr4:44741755-44741592 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 76, 0

Conread position: 537-665
Cow position: chr4:14564375-14564242 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 538-670
Cow position: chr4:41297111-41296976 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 70

Show alignments to all cow chromosomes.