Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10181H07.5 |
| Conread position: | 139-668 |
| Cow position: | chr5:51744508-51745038 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 23 |
| Conread position: | 160-384 |
| Cow position: | chr5:4756927-4756697 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 160-403 |
| Cow position: | chr5:23831065-23830815 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 67 |
| Conread position: | 160-639 |
| Cow position: | chr5:27197865-27198348 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 302 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 11, 296 |
| Conread position: | 160-665 |
| Cow position: | chr5:307157-306644 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 138 |
| Conread position: | 160-668 |
| Cow position: | chr5:10855561-10855047 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 337 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 7, 24 |
| Conread position: | 166-668 |
| Cow position: | chr5:2975056-2975562 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 326 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 25, 230 |
| Conread position: | 169-367 |
| Cow position: | chr5:53946088-53946297 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 162 |
| Conread position: | 169-388 |
| Cow position: | chr5:42751732-42751962 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 42, 204 |
| Conread position: | 169-402 |
| Cow position: | chr5:13046913-13047144 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 31, 64 |
| Conread position: | 169-414 |
| Cow position: | chr5:34201686-34201425 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 169-668 |
| Cow position: | chr5:50870874-50871381 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 104 |
| Conread position: | 170-384 |
| Cow position: | chr5:2459250-2459468 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 50, 164 |
| Conread position: | 170-384 |
| Cow position: | chr5:35301365-35301584 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 170-384 |
| Cow position: | chr5:46777660-46777879 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 170-403 |
| Cow position: | chr5:6587321-6587082 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 170-411 |
| Cow position: | chr5:41376587-41376337 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 50, 229 |
| Conread position: | 170-414 |
| Cow position: | chr5:10813483-10813233 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 170-414 |
| Cow position: | chr5:48807466-48807216 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 13 |
| Conread position: | 170-509 |
| Cow position: | chr5:49223225-49222901 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 38, 174 |
| Conread position: | 170-649 |
| Cow position: | chr5:987801-987314 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 248 |
| Conread position: | 170-665 |
| Cow position: | chr5:26077925-26077420 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 324 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 54, 227 |
| Conread position: | 170-665 |
| Cow position: | chr5:32774032-32774540 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 322 |
| Conread position: | 170-665 |
| Cow position: | chr5:40131335-40130829 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 325 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 50, 241 |
| Conread position: | 170-665 |
| Cow position: | chr5:73487800-73487289 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 329 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 17, 13 |
| Conread position: | 170-668 |
| Cow position: | chr5:3965716-3966216 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 9 |
| Conread position: | 170-668 |
| Cow position: | chr5:4684537-4684033 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 102 |
| Conread position: | 170-668 |
| Cow position: | chr5:6153632-6153124 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 165 |
| Conread position: | 170-668 |
| Cow position: | chr5:10774996-10774491 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 314 |
| Conread position: | 170-668 |
| Cow position: | chr5:10842114-10841608 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 287 |
| Conread position: | 170-668 |
| Cow position: | chr5:12731447-12730946 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 34 |
| Conread position: | 170-668 |
| Cow position: | chr5:18560139-18559637 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 332 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 59, 17 |
| Conread position: | 170-668 |
| Cow position: | chr5:58197283-58197789 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 335 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 50, 229 |
| Conread position: | 170-668 |
| Cow position: | chr5:64780748-64780240 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 165 |
| Conread position: | 170-668 |
| Cow position: | chr5:76096321-76096823 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 162 |
| Conread position: | 171-668 |
| Cow position: | chr5:59061903-59062408 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 341 |
| Conread position: | 172-432 |
| Cow position: | chr5:57481271-57481005 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 172-668 |
| Cow position: | chr5:23959061-23958556 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 227 |
| Conread position: | 174-384 |
| Cow position: | chr5:5104483-5104701 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 61, 34 |
| Conread position: | 176-427 |
| Cow position: | chr5:53006872-53007133 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 24, 227 |
| Conread position: | 177-401 |
| Cow position: | chr5:37655178-37655406 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 55, 11 |
| Conread position: | 178-662 |
| Cow position: | chr5:18885252-18884789 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 310 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 32, 7 |
| Conread position: | 179-414 |
| Cow position: | chr5:9037859-9037630 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 54, 8 |
| Conread position: | 179-414 |
| Cow position: | chr5:14784098-14783853 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 37, 196 |
| Conread position: | 179-506 |
| Cow position: | chr5:52435007-52435337 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 227 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 37, 91 |
| Conread position: | 179-668 |
| Cow position: | chr5:46004597-46004105 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 312 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 30, 87 |
| Conread position: | 183-367 |
| Cow position: | chr5:18665046-18665235 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 183-384 |
| Cow position: | chr5:46808583-46808789 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 183-411 |
| Cow position: | chr5:26184132-26184374 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 177 |
| Conread position: | 183-414 |
| Cow position: | chr5:4386508-4386745 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 89 |
| Conread position: | 183-506 |
| Cow position: | chr5:37733620-37733939 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 26, 160 |
| Conread position: | 183-665 |
| Cow position: | chr5:7275111-7275599 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 321 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 52, 5 |
| Conread position: | 183-668 |
| Cow position: | chr5:3502837-3502333 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 292 |
| Conread position: | 183-668 |
| Cow position: | chr5:4017927-4017438 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 328 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 26, 67 |
| Conread position: | 183-668 |
| Cow position: | chr5:10920111-10920608 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 326 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 26, 5 |
| Conread position: | 183-668 |
| Cow position: | chr5:18121211-18120709 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 238 |
| Conread position: | 183-668 |
| Cow position: | chr5:24099928-24100415 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 321 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 23, 152 |
| Conread position: | 183-668 |
| Cow position: | chr5:31707834-31708334 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 245 |
| Conread position: | 183-668 |
| Cow position: | chr5:48533233-48533717 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 323 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 18, 220 |
| Conread position: | 183-670 |
| Cow position: | chr5:50947903-50948423 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 184-403 |
| Cow position: | chr5:13536551-13536783 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 28, 97 |
| Conread position: | 185-379 |
| Cow position: | chr5:35527205-35527406 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 5, 140 |
| Conread position: | 185-380 |
| Cow position: | chr5:7810971-7810768 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 50, 88 |
| Conread position: | 185-440 |
| Cow position: | chr5:62823759-62824028 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 26, 243 |
| Conread position: | 185-506 |
| Cow position: | chr5:34298188-34298496 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 93 |
| Conread position: | 185-606 |
| Cow position: | chr5:40789334-40789758 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 290 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 42, 8 |
| Conread position: | 185-668 |
| Cow position: | chr5:18400421-18399933 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 94 |
| Conread position: | 187-415 |
| Cow position: | chr5:49757432-49757191 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 132 |
| Conread position: | 189-614 |
| Cow position: | chr5:11115476-11115068 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 197, 35 |
| Conread position: | 190-670 |
| Cow position: | chr5:16102774-16102296 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 310 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 283, 49 |
| Conread position: | 200-665 |
| Cow position: | chr5:2915731-2916203 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 307 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 29, 134 |
| Conread position: | 200-668 |
| Cow position: | chr5:37378423-37378899 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 311 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 21, 256 |
| Conread position: | 204-378 |
| Cow position: | chr5:23686617-23686436 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 204-415 |
| Cow position: | chr5:15375993-15376203 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 180, 28 |
| Conread position: | 204-560 |
| Cow position: | chr5:43988408-43988759 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 9, 30 |
| Conread position: | 205-401 |
| Cow position: | chr5:18274052-18274256 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 205-407 |
| Cow position: | chr5:23230281-23230489 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 30, 194 |
| Conread position: | 205-622 |
| Cow position: | chr5:31100132-31099711 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 277 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 219-417 |
| Cow position: | chr5:24104147-24103947 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 17, 150 |
| Conread position: | 222-433 |
| Cow position: | chr5:54860654-54860437 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 231-411 |
| Cow position: | chr5:14658118-14657942 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 231-411 |
| Cow position: | chr5:28333152-28332973 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 231-665 |
| Cow position: | chr5:54620377-54620809 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 282 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 93, 76 |
| Conread position: | 234-384 |
| Cow position: | chr5:12681715-12681565 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 234-507 |
| Cow position: | chr5:47829741-47829488 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 234-665 |
| Cow position: | chr5:29434418-29434003 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 275 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 243, 50 |
| Conread position: | 234-668 |
| Cow position: | chr5:24152103-24152548 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 114, 172 |
| Conread position: | 235-506 |
| Cow position: | chr5:45701646-45701903 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 236-384 |
| Cow position: | chr5:20108239-20108387 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 236-403 |
| Cow position: | chr5:41527460-41527292 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 60, 155 |
| Conread position: | 236-410 |
| Cow position: | chr5:31122249-31122074 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 238-414 |
| Cow position: | chr5:34697990-34698167 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 96, 91 |
| Conread position: | 238-668 |
| Cow position: | chr5:55629327-55629756 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 152, 91 |
| Conread position: | 238-670 |
| Cow position: | chr5:49487829-49488249 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 276 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 349, 50 |
| Conread position: | 239-664 |
| Cow position: | chr5:3787278-3787706 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 106, 90 |
| Conread position: | 265-668 |
| Cow position: | chr5:3424724-3425137 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 261 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 19, 54 |
| Conread position: | 277-631 |
| Cow position: | chr5:12642056-12641703 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 115, 140 |
| Conread position: | 288-668 |
| Cow position: | chr5:58191372-58190989 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 102, 219 |
| Conread position: | 431-670 |
| Cow position: | chr5:43988608-43988840 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 16, 112 |
| Conread position: | 433-669 |
| Cow position: | chr5:34904141-34904394 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 74, 127 |
| Conread position: | 505-665 |
| Cow position: | chr5:40348677-40348517 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 86, 33 |
| Conread position: | 506-670 |
| Cow position: | chr5:24103871-24103704 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 508-661 |
| Cow position: | chr5:28014616-28014770 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 91, 36 |
| Conread position: | 508-665 |
| Cow position: | chr5:5894642-5894803 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 508-665 |
| Cow position: | chr5:10813141-10812980 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 508-665 |
| Cow position: | chr5:42506355-42506516 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 508-665 |
| Cow position: | chr5:46778002-46778163 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 508-665 |
| Cow position: | chr5:46791453-46791614 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 508-665 |
| Cow position: | chr5:50505242-50505406 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 508-668 |
| Cow position: | chr5:1340318-1340154 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 508-668 |
| Cow position: | chr5:4386831-4386994 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 508-668 |
| Cow position: | chr5:5926360-5926195 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 508-668 |
| Cow position: | chr5:29767703-29767871 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 508-668 |
| Cow position: | chr5:31327143-31327306 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 79, 99 |
| Conread position: | 508-668 |
| Cow position: | chr5:31642911-31642750 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 12 |
| Conread position: | 508-668 |
| Cow position: | chr5:41065897-41065733 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 508-668 |
| Cow position: | chr5:46665606-46665770 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 508-668 |
| Cow position: | chr5:46736985-46736820 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 508-668 |
| Cow position: | chr5:49520320-49520480 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 89, 64 |
| Conread position: | 508-668 |
| Cow position: | chr5:55993839-55993676 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 508-670 |
| Cow position: | chr5:14344123-14343957 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 508-670 |
| Cow position: | chr5:34298519-34298685 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 508-670 |
| Cow position: | chr5:41960033-41959872 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 84, 94 |
| Conread position: | 508-670 |
| Cow position: | chr5:59084540-59084375 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 508-672 |
| Cow position: | chr5:49118729-49118563 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 509-668 |
| Cow position: | chr5:4756573-4756410 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 509-668 |
| Cow position: | chr5:5104824-5104987 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 509-668 |
| Cow position: | chr5:6586978-6586814 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 510-668 |
| Cow position: | chr5:4070824-4070986 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 511-668 |
| Cow position: | chr5:37733964-37734125 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 511-668 |
| Cow position: | chr5:59283914-59284075 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
Show alignments to all cow chromosomes.