Cow genome map

Conread name: Ss1.1-Ova1-OVRM10181H07.5

Conread position: 139-668
Cow position:
Alignm length: 545
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 23

Conread position: 160-384
Cow position:
Alignm length: 231
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 160-403
Cow position:
Alignm length: 253
Alignm identity: 170
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 67

Conread position: 160-639
Cow position:
Alignm length: 491
Alignm identity: 302
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 11, 296

Conread position: 160-665
Cow position:
Alignm length: 519
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 138

Conread position: 160-668
Cow position:
Alignm length: 528
Alignm identity: 337
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 7, 24

Conread position: 166-668
Cow position:
Alignm length: 515
Alignm identity: 326
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 25, 230

Conread position: 169-367
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 162

Conread position: 169-388
Cow position:
Alignm length: 232
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 42, 204

Conread position: 169-402
Cow position:
Alignm length: 237
Alignm identity: 173
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 31, 64

Conread position: 169-414
Cow position:
Alignm length: 262
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 169-668
Cow position:
Alignm length: 518
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 104

Conread position: 170-384
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 164

Conread position: 170-384
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 170-384
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 170-403
Cow position:
Alignm length: 240
Alignm identity: 167
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 170-411
Cow position:
Alignm length: 252
Alignm identity: 176
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 229

Conread position: 170-414
Cow position:
Alignm length: 251
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 170-414
Cow position:
Alignm length: 253
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 13

Conread position: 170-509
Cow position:
Alignm length: 345
Alignm identity: 233
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 174

Conread position: 170-649
Cow position:
Alignm length: 491
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 248

Conread position: 170-665
Cow position:
Alignm length: 511
Alignm identity: 324
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 54, 227

Conread position: 170-665
Cow position:
Alignm length: 514
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 322

Conread position: 170-665
Cow position:
Alignm length: 510
Alignm identity: 325
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 50, 241

Conread position: 170-665
Cow position:
Alignm length: 514
Alignm identity: 329
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 17, 13

Conread position: 170-668
Cow position:
Alignm length: 512
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 9

Conread position: 170-668
Cow position:
Alignm length: 510
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 102

Conread position: 170-668
Cow position:
Alignm length: 512
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 165

Conread position: 170-668
Cow position:
Alignm length: 509
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 314

Conread position: 170-668
Cow position:
Alignm length: 512
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 287

Conread position: 170-668
Cow position:
Alignm length: 506
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 34

Conread position: 170-668
Cow position:
Alignm length: 516
Alignm identity: 332
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 59, 17

Conread position: 170-668
Cow position:
Alignm length: 515
Alignm identity: 335
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 50, 229

Conread position: 170-668
Cow position:
Alignm length: 514
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 165

Conread position: 170-668
Cow position:
Alignm length: 510
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 162

Conread position: 171-668
Cow position:
Alignm length: 511
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 341

Conread position: 172-432
Cow position:
Alignm length: 270
Alignm identity: 178
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 7

Conread position: 172-668
Cow position:
Alignm length: 510
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 227

Conread position: 174-384
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 34

Conread position: 176-427
Cow position:
Alignm length: 265
Alignm identity: 181
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 24, 227

Conread position: 177-401
Cow position:
Alignm length: 235
Alignm identity: 170
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 11

Conread position: 178-662
Cow position:
Alignm length: 491
Alignm identity: 310
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 7

Conread position: 179-414
Cow position:
Alignm length: 239
Alignm identity: 166
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 54, 8

Conread position: 179-414
Cow position:
Alignm length: 251
Alignm identity: 175
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 37, 196

Conread position: 179-506
Cow position:
Alignm length: 342
Alignm identity: 227
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 37, 91

Conread position: 179-668
Cow position:
Alignm length: 498
Alignm identity: 312
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 30, 87

Conread position: 183-367
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 183-384
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 183-411
Cow position:
Alignm length: 244
Alignm identity: 165
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 177

Conread position: 183-414
Cow position:
Alignm length: 241
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 89

Conread position: 183-506
Cow position:
Alignm length: 339
Alignm identity: 237
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 160

Conread position: 183-665
Cow position:
Alignm length: 501
Alignm identity: 321
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 52, 5

Conread position: 183-668
Cow position:
Alignm length: 509
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 292

Conread position: 183-668
Cow position:
Alignm length: 504
Alignm identity: 328
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 26, 67

Conread position: 183-668
Cow position:
Alignm length: 508
Alignm identity: 326
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 26, 5

Conread position: 183-668
Cow position:
Alignm length: 506
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 238

Conread position: 183-668
Cow position:
Alignm length: 496
Alignm identity: 321
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 23, 152

Conread position: 183-668
Cow position:
Alignm length: 506
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 245

Conread position: 183-668
Cow position:
Alignm length: 500
Alignm identity: 323
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 18, 220

Conread position: 183-670
Cow position:
Alignm length: 521
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 184-403
Cow position:
Alignm length: 237
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 97

Conread position: 185-379
Cow position:
Alignm length: 205
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 5, 140

Conread position: 185-380
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 50, 88

Conread position: 185-440
Cow position:
Alignm length: 271
Alignm identity: 185
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 243

Conread position: 185-506
Cow position:
Alignm length: 326
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 93

Conread position: 185-606
Cow position:
Alignm length: 436
Alignm identity: 290
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 42, 8

Conread position: 185-668
Cow position:
Alignm length: 503
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 94

Conread position: 187-415
Cow position:
Alignm length: 243
Alignm identity: 169
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 132

Conread position: 189-614
Cow position:
Alignm length: 429
Alignm identity: 285
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 197, 35

Conread position: 190-670
Cow position:
Alignm length: 490
Alignm identity: 310
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 283, 49

Conread position: 200-665
Cow position:
Alignm length: 479
Alignm identity: 307
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 29, 134

Conread position: 200-668
Cow position:
Alignm length: 482
Alignm identity: 311
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 21, 256

Conread position: 204-378
Cow position:
Alignm length: 182
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 204-415
Cow position:
Alignm length: 214
Alignm identity: 147
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 180, 28

Conread position: 204-560
Cow position:
Alignm length: 360
Alignm identity: 234
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 9, 30

Conread position: 205-401
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 205-407
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 30, 194

Conread position: 205-622
Cow position:
Alignm length: 433
Alignm identity: 277
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 24, 72

Conread position: 219-417
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 17, 150

Conread position: 222-433
Cow position:
Alignm length: 218
Alignm identity: 149
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 231-411
Cow position:
Alignm length: 181
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 135, 0

Conread position: 231-411
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 161, 0

Conread position: 231-665
Cow position:
Alignm length: 444
Alignm identity: 282
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 93, 76

Conread position: 234-384
Cow position:
Alignm length: 151
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 234-507
Cow position:
Alignm length: 274
Alignm identity: 192
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 146, 0

Conread position: 234-665
Cow position:
Alignm length: 435
Alignm identity: 275
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 243, 50

Conread position: 234-668
Cow position:
Alignm length: 449
Alignm identity: 285
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 114, 172

Conread position: 235-506
Cow position:
Alignm length: 272
Alignm identity: 179
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 151, 0

Conread position: 236-384
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 236-403
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 60, 155

Conread position: 236-410
Cow position:
Alignm length: 176
Alignm identity: 126
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 150, 0

Conread position: 238-414
Cow position:
Alignm length: 179
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 96, 91

Conread position: 238-668
Cow position:
Alignm length: 437
Alignm identity: 280
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 152, 91

Conread position: 238-670
Cow position:
Alignm length: 437
Alignm identity: 276
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 349, 50

Conread position: 239-664
Cow position:
Alignm length: 434
Alignm identity: 273
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 106, 90

Conread position: 265-668
Cow position:
Alignm length: 416
Alignm identity: 261
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 19, 54

Conread position: 277-631
Cow position:
Alignm length: 359
Alignm identity: 236
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 115, 140

Conread position: 288-668
Cow position:
Alignm length: 389
Alignm identity: 247
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 102, 219

Conread position: 431-670
Cow position:
Alignm length: 244
Alignm identity: 176
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 112

Conread position: 433-669
Cow position:
Alignm length: 256
Alignm identity: 185
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 74, 127

Conread position: 505-665
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 33

Conread position: 506-670
Cow position:
Alignm length: 168
Alignm identity: 131
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 89, 0

Conread position: 508-661
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 91, 36

Conread position: 508-665
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 508-665
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 508-665
Cow position:
Alignm length: 162
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 77, 0

Conread position: 508-665
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 508-665
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 508-665
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 508-668
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 508-668
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 508-668
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 508-668
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 7, 19

Conread position: 508-668
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 79, 99

Conread position: 508-668
Cow position:
Alignm length: 163
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 12

Conread position: 508-668
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 508-668
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 508-668
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 508-668
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 89, 64

Conread position: 508-668
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 508-670
Cow position:
Alignm length: 167
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 508-670
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 79, 0

Conread position: 508-670
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 94

Conread position: 508-670
Cow position:
Alignm length: 166
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 508-672
Cow position:
Alignm length: 167
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 509-668
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 509-668
Cow position:
Alignm length: 164
Alignm identity: 127
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 509-668
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 510-668
Cow position:
Alignm length: 163
Alignm identity: 118
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 511-668
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 511-668
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 71, 0

Show alignments to all cow chromosomes.