Cow genome map

Conread name: Ss1.1-Ova1-OVRM10181H07.5

Conread position: 159-414
Cow position:
Alignm length: 263
Alignm identity: 173
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 159-668
Cow position:
Alignm length: 527
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 160-384
Cow position:
Alignm length: 231
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 160-665
Cow position:
Alignm length: 520
Alignm identity: 331
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 11, 24

Conread position: 160-665
Cow position:
Alignm length: 518
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 252

Conread position: 160-668
Cow position:
Alignm length: 526
Alignm identity: 335
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 11, 20

Conread position: 160-668
Cow position:
Alignm length: 528
Alignm identity: 330
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 11, 20

Conread position: 160-668
Cow position:
Alignm length: 525
Alignm identity: 326
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 7, 176

Conread position: 163-664
Cow position:
Alignm length: 512
Alignm identity: 319
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 13, 54

Conread position: 167-663
Cow position:
Alignm length: 526
Alignm identity: 338
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 18, 177

Conread position: 169-662
Cow position:
Alignm length: 516
Alignm identity: 329
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 13, 160

Conread position: 169-665
Cow position:
Alignm length: 514
Alignm identity: 330
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 60, 28

Conread position: 169-668
Cow position:
Alignm length: 528
Alignm identity: 341
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 16, 95

Conread position: 170-379
Cow position:
Alignm length: 215
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 196

Conread position: 170-384
Cow position:
Alignm length: 218
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 170-384
Cow position:
Alignm length: 220
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 94

Conread position: 170-384
Cow position:
Alignm length: 220
Alignm identity: 148
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 54, 155

Conread position: 170-386
Cow position:
Alignm length: 223
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 165

Conread position: 170-400
Cow position:
Alignm length: 238
Alignm identity: 169
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 229

Conread position: 170-428
Cow position:
Alignm length: 267
Alignm identity: 178
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 164

Conread position: 170-430
Cow position:
Alignm length: 267
Alignm identity: 180
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 170-632
Cow position:
Alignm length: 477
Alignm identity: 300
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 51, 202

Conread position: 170-649
Cow position:
Alignm length: 489
Alignm identity: 312
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 17, 13

Conread position: 170-658
Cow position:
Alignm length: 499
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 87

Conread position: 170-665
Cow position:
Alignm length: 513
Alignm identity: 320
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 17, 13

Conread position: 170-665
Cow position:
Alignm length: 507
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 241

Conread position: 170-665
Cow position:
Alignm length: 508
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 161

Conread position: 170-668
Cow position:
Alignm length: 510
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 164

Conread position: 170-668
Cow position:
Alignm length: 509
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 321

Conread position: 170-668
Cow position:
Alignm length: 508
Alignm identity: 324
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 45, 287

Conread position: 170-668
Cow position:
Alignm length: 513
Alignm identity: 332
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 13

Conread position: 170-668
Cow position:
Alignm length: 514
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 229

Conread position: 170-668
Cow position:
Alignm length: 515
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 13

Conread position: 170-668
Cow position:
Alignm length: 514
Alignm identity: 328
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 52, 34

Conread position: 170-668
Cow position:
Alignm length: 510
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 130

Conread position: 170-668
Cow position:
Alignm length: 523
Alignm identity: 336
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 65, 9

Conread position: 170-668
Cow position:
Alignm length: 511
Alignm identity: 327
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 50, 341

Conread position: 170-668
Cow position:
Alignm length: 508
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 131

Conread position: 170-668
Cow position:
Alignm length: 512
Alignm identity: 330
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 66, 50

Conread position: 170-668
Cow position:
Alignm length: 507
Alignm identity: 324
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 50, 111

Conread position: 171-668
Cow position:
Alignm length: 508
Alignm identity: 327
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 38, 26

Conread position: 172-400
Cow position:
Alignm length: 241
Alignm identity: 166
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 172-612
Cow position:
Alignm length: 457
Alignm identity: 292
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 59, 13

Conread position: 173-384
Cow position:
Alignm length: 215
Alignm identity: 147
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 56, 110

Conread position: 173-668
Cow position:
Alignm length: 505
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 335

Conread position: 173-668
Cow position:
Alignm length: 503
Alignm identity: 319
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 57, 67

Conread position: 173-668
Cow position:
Alignm length: 510
Alignm identity: 322
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 57, 161

Conread position: 175-493
Cow position:
Alignm length: 327
Alignm identity: 217
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 18, 113

Conread position: 177-433
Cow position:
Alignm length: 274
Alignm identity: 190
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 32, 11

Conread position: 179-665
Cow position:
Alignm length: 513
Alignm identity: 335
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 33, 9

Conread position: 183-402
Cow position:
Alignm length: 234
Alignm identity: 168
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 183-664
Cow position:
Alignm length: 503
Alignm identity: 318
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 26, 160

Conread position: 183-665
Cow position:
Alignm length: 495
Alignm identity: 309
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 85

Conread position: 183-665
Cow position:
Alignm length: 499
Alignm identity: 330
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 26, 163

Conread position: 183-668
Cow position:
Alignm length: 508
Alignm identity: 333
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 26, 5

Conread position: 183-668
Cow position:
Alignm length: 503
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 25

Conread position: 183-668
Cow position:
Alignm length: 506
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 144

Conread position: 183-668
Cow position:
Alignm length: 513
Alignm identity: 330
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 26, 317

Conread position: 183-670
Cow position:
Alignm length: 501
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 61

Conread position: 183-670
Cow position:
Alignm length: 508
Alignm identity: 335
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 26, 157

Conread position: 183-671
Cow position:
Alignm length: 505
Alignm identity: 317
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 26, 254

Conread position: 184-432
Cow position:
Alignm length: 260
Alignm identity: 173
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 25, 240

Conread position: 184-504
Cow position:
Alignm length: 330
Alignm identity: 224
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 34, 28

Conread position: 185-359
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 7, 149

Conread position: 185-382
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 185-417
Cow position:
Alignm length: 237
Alignm identity: 163
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 46, 121

Conread position: 185-668
Cow position:
Alignm length: 508
Alignm identity: 332
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 7, 80

Conread position: 185-672
Cow position:
Alignm length: 516
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 183

Conread position: 188-665
Cow position:
Alignm length: 490
Alignm identity: 312
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 24, 268

Conread position: 188-665
Cow position:
Alignm length: 485
Alignm identity: 313
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 24

Conread position: 188-665
Cow position:
Alignm length: 492
Alignm identity: 312
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 47, 14

Conread position: 188-668
Cow position:
Alignm length: 498
Alignm identity: 324
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 47, 114

Conread position: 189-668
Cow position:
Alignm length: 498
Alignm identity: 317
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 20, 154

Conread position: 191-384
Cow position:
Alignm length: 199
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 99

Conread position: 203-403
Cow position:
Alignm length: 204
Alignm identity: 146
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 60, 17

Conread position: 204-364
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 204-384
Cow position:
Alignm length: 181
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 204-417
Cow position:
Alignm length: 217
Alignm identity: 148
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 30, 185

Conread position: 204-665
Cow position:
Alignm length: 472
Alignm identity: 304
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 180, 21

Conread position: 205-670
Cow position:
Alignm length: 480
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 47

Conread position: 207-418
Cow position:
Alignm length: 213
Alignm identity: 150
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 27, 17

Conread position: 208-670
Cow position:
Alignm length: 472
Alignm identity: 302
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 25, 11

Conread position: 234-668
Cow position:
Alignm length: 438
Alignm identity: 284
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 150, 39

Conread position: 236-384
Cow position:
Alignm length: 149
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 236-428
Cow position:
Alignm length: 195
Alignm identity: 136
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 150, 35

Conread position: 238-659
Cow position:
Alignm length: 431
Alignm identity: 286
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 238, 148

Conread position: 239-665
Cow position:
Alignm length: 435
Alignm identity: 288
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 144, 90

Conread position: 240-665
Cow position:
Alignm length: 432
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 174

Conread position: 251-403
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 135, 13

Conread position: 276-509
Cow position:
Alignm length: 234
Alignm identity: 170
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 88, 0

Conread position: 404-668
Cow position:
Alignm length: 286
Alignm identity: 190
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 99, 172

Conread position: 426-668
Cow position:
Alignm length: 243
Alignm identity: 164
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 508-663
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 508-663
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 508-665
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 508-665
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 508-665
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 508-665
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 508-665
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 508-665
Cow position:
Alignm length: 166
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 508-668
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 508-668
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 508-668
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 508-668
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 508-668
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 55, 46

Conread position: 508-668
Cow position:
Alignm length: 165
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 508-668
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 508-669
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 508-670
Cow position:
Alignm length: 167
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 508-672
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 79, 150

Conread position: 509-657
Cow position:
Alignm length: 153
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 509-665
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 61, 77

Conread position: 509-668
Cow position:
Alignm length: 164
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 510-663
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 51

Conread position: 510-665
Cow position:
Alignm length: 159
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 511-665
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 511-668
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 515-668
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 82, 18

Conread position: 515-670
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 86

Conread position: 532-668
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 59, 0

Show alignments to all cow chromosomes.