Cow genome map

Conread name: Ss1.1-Ova1-OVRM10181H07.5

Conread position: 152-668
Cow position:
Alignm length: 539
Alignm identity: 339
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 19, 8

Conread position: 156-378
Cow position:
Alignm length: 225
Alignm identity: 158
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 64, 29

Conread position: 158-668
Cow position:
Alignm length: 527
Alignm identity: 340
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 13, 26

Conread position: 160-431
Cow position:
Alignm length: 280
Alignm identity: 187
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 7, 175

Conread position: 160-668
Cow position:
Alignm length: 524
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 24

Conread position: 160-668
Cow position:
Alignm length: 523
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 24

Conread position: 165-405
Cow position:
Alignm length: 246
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 90

Conread position: 165-414
Cow position:
Alignm length: 258
Alignm identity: 176
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 56, 5

Conread position: 169-384
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 169-414
Cow position:
Alignm length: 261
Alignm identity: 174
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 169-429
Cow position:
Alignm length: 272
Alignm identity: 192
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 13, 20

Conread position: 170-378
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 170-384
Cow position:
Alignm length: 218
Alignm identity: 152
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 18, 9

Conread position: 170-384
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 170-384
Cow position:
Alignm length: 217
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 108

Conread position: 170-396
Cow position:
Alignm length: 234
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 164

Conread position: 170-403
Cow position:
Alignm length: 242
Alignm identity: 171
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 17, 229

Conread position: 170-414
Cow position:
Alignm length: 251
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 13

Conread position: 170-414
Cow position:
Alignm length: 252
Alignm identity: 170
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 170-414
Cow position:
Alignm length: 251
Alignm identity: 172
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 170-414
Cow position:
Alignm length: 251
Alignm identity: 173
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 170-607
Cow position:
Alignm length: 451
Alignm identity: 294
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 50, 286

Conread position: 170-655
Cow position:
Alignm length: 494
Alignm identity: 311
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 59, 215

Conread position: 170-664
Cow position:
Alignm length: 506
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 248

Conread position: 170-665
Cow position:
Alignm length: 511
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 177

Conread position: 170-665
Cow position:
Alignm length: 517
Alignm identity: 328
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 50, 229

Conread position: 170-665
Cow position:
Alignm length: 509
Alignm identity: 317
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 50, 241

Conread position: 170-665
Cow position:
Alignm length: 507
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 249

Conread position: 170-668
Cow position:
Alignm length: 512
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 17

Conread position: 170-668
Cow position:
Alignm length: 517
Alignm identity: 328
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 47, 17

Conread position: 170-668
Cow position:
Alignm length: 512
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 187

Conread position: 170-668
Cow position:
Alignm length: 520
Alignm identity: 335
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 39, 22

Conread position: 170-668
Cow position:
Alignm length: 510
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 241

Conread position: 170-668
Cow position:
Alignm length: 512
Alignm identity: 325
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 17, 9

Conread position: 170-668
Cow position:
Alignm length: 516
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 285

Conread position: 170-668
Cow position:
Alignm length: 530
Alignm identity: 346
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 14, 109

Conread position: 170-668
Cow position:
Alignm length: 508
Alignm identity: 320
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 17, 13

Conread position: 170-668
Cow position:
Alignm length: 510
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 287

Conread position: 170-668
Cow position:
Alignm length: 510
Alignm identity: 320
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 67, 249

Conread position: 170-668
Cow position:
Alignm length: 513
Alignm identity: 331
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 17, 13

Conread position: 170-668
Cow position:
Alignm length: 520
Alignm identity: 332
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 42, 173

Conread position: 170-668
Cow position:
Alignm length: 513
Alignm identity: 317
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 17, 13

Conread position: 170-672
Cow position:
Alignm length: 518
Alignm identity: 330
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 26, 13

Conread position: 171-402
Cow position:
Alignm length: 242
Alignm identity: 168
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 60, 29

Conread position: 171-402
Cow position:
Alignm length: 238
Alignm identity: 164
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 171-414
Cow position:
Alignm length: 250
Alignm identity: 170
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 49, 80

Conread position: 171-416
Cow position:
Alignm length: 248
Alignm identity: 168
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 55, 12

Conread position: 172-668
Cow position:
Alignm length: 510
Alignm identity: 323
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 8, 45

Conread position: 173-408
Cow position:
Alignm length: 243
Alignm identity: 168
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 56, 220

Conread position: 173-664
Cow position:
Alignm length: 505
Alignm identity: 312
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 21, 32

Conread position: 173-668
Cow position:
Alignm length: 511
Alignm identity: 316
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 21, 32

Conread position: 176-390
Cow position:
Alignm length: 225
Alignm identity: 153
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 57, 220

Conread position: 176-668
Cow position:
Alignm length: 512
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 82

Conread position: 177-668
Cow position:
Alignm length: 523
Alignm identity: 334
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 32, 15

Conread position: 178-631
Cow position:
Alignm length: 464
Alignm identity: 300
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 208, 69

Conread position: 178-668
Cow position:
Alignm length: 513
Alignm identity: 331
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 287

Conread position: 179-502
Cow position:
Alignm length: 334
Alignm identity: 224
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 17, 6

Conread position: 179-667
Cow position:
Alignm length: 496
Alignm identity: 313
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 50, 155

Conread position: 183-359
Cow position:
Alignm length: 182
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 71, 33

Conread position: 183-411
Cow position:
Alignm length: 242
Alignm identity: 181
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 183-431
Cow position:
Alignm length: 265
Alignm identity: 180
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 26, 160

Conread position: 183-432
Cow position:
Alignm length: 263
Alignm identity: 180
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 196

Conread position: 183-433
Cow position:
Alignm length: 267
Alignm identity: 184
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 160

Conread position: 183-665
Cow position:
Alignm length: 502
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 109

Conread position: 183-665
Cow position:
Alignm length: 509
Alignm identity: 329
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 29, 160

Conread position: 183-668
Cow position:
Alignm length: 505
Alignm identity: 323
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 26, 11

Conread position: 183-668
Cow position:
Alignm length: 508
Alignm identity: 332
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 25, 98

Conread position: 183-668
Cow position:
Alignm length: 522
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 13

Conread position: 183-668
Cow position:
Alignm length: 502
Alignm identity: 320
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 51, 25

Conread position: 184-403
Cow position:
Alignm length: 223
Alignm identity: 151
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 184-665
Cow position:
Alignm length: 501
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 236

Conread position: 184-668
Cow position:
Alignm length: 508
Alignm identity: 333
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 147

Conread position: 184-670
Cow position:
Alignm length: 516
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 213

Conread position: 185-378
Cow position:
Alignm length: 196
Alignm identity: 135
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 53, 104

Conread position: 185-411
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 31, 180

Conread position: 185-414
Cow position:
Alignm length: 236
Alignm identity: 169
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 67, 8

Conread position: 186-668
Cow position:
Alignm length: 504
Alignm identity: 322
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 6, 156

Conread position: 188-384
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 27, 144

Conread position: 188-402
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 42, 177

Conread position: 188-670
Cow position:
Alignm length: 497
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 210

Conread position: 200-367
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 13

Conread position: 200-665
Cow position:
Alignm length: 482
Alignm identity: 315
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 31, 258

Conread position: 204-668
Cow position:
Alignm length: 479
Alignm identity: 315
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 180, 26

Conread position: 204-670
Cow position:
Alignm length: 484
Alignm identity: 314
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 32, 170

Conread position: 204-672
Cow position:
Alignm length: 483
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 106

Conread position: 205-668
Cow position:
Alignm length: 482
Alignm identity: 309
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 30, 258

Conread position: 213-665
Cow position:
Alignm length: 475
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 42

Conread position: 231-403
Cow position:
Alignm length: 174
Alignm identity: 138
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 155, 0

Conread position: 232-402
Cow position:
Alignm length: 173
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 154, 161

Conread position: 232-670
Cow position:
Alignm length: 445
Alignm identity: 286
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 234, 51

Conread position: 234-670
Cow position:
Alignm length: 453
Alignm identity: 292
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 80, 37

Conread position: 235-414
Cow position:
Alignm length: 181
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 151, 0

Conread position: 243-394
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 147, 19

Conread position: 245-668
Cow position:
Alignm length: 428
Alignm identity: 270
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 145, 168

Conread position: 273-668
Cow position:
Alignm length: 400
Alignm identity: 251
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 314, 14

Conread position: 276-668
Cow position:
Alignm length: 408
Alignm identity: 277
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 239, 27

Conread position: 277-670
Cow position:
Alignm length: 402
Alignm identity: 263
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 113, 176

Conread position: 278-672
Cow position:
Alignm length: 401
Alignm identity: 251
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 62, 51

Conread position: 281-668
Cow position:
Alignm length: 409
Alignm identity: 281
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 106, 36

Conread position: 310-504
Cow position:
Alignm length: 196
Alignm identity: 141
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 26, 73

Conread position: 405-668
Cow position:
Alignm length: 275
Alignm identity: 186
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 17, 190

Conread position: 429-668
Cow position:
Alignm length: 258
Alignm identity: 176
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 82, 154

Conread position: 433-665
Cow position:
Alignm length: 255
Alignm identity: 187
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 65, 34

Conread position: 433-668
Cow position:
Alignm length: 250
Alignm identity: 174
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 86

Conread position: 434-668
Cow position:
Alignm length: 248
Alignm identity: 171
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 77, 132

Conread position: 435-652
Cow position:
Alignm length: 233
Alignm identity: 167
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 73, 0

Conread position: 472-669
Cow position:
Alignm length: 198
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 505-668
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 96

Conread position: 506-668
Cow position:
Alignm length: 171
Alignm identity: 123
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 508-664
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 508-665
Cow position:
Alignm length: 161
Alignm identity: 125
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 79, 0

Conread position: 508-665
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 508-665
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 508-668
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 125

Conread position: 508-668
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 46, 50

Conread position: 508-668
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 508-668
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 508-668
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 79, 51

Conread position: 508-668
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 508-668
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 508-668
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 508-668
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 123

Conread position: 508-668
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 508-668
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 508-670
Cow position:
Alignm length: 167
Alignm identity: 135
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 79, 59

Conread position: 508-670
Cow position:
Alignm length: 166
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 509-662
Cow position:
Alignm length: 158
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 509-668
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 510-668
Cow position:
Alignm length: 161
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 510-668
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 511-657
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 515-665
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 88, 113

Conread position: 534-668
Cow position:
Alignm length: 139
Alignm identity: 119
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 547-665
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Show alignments to all cow chromosomes.