Cow genome map


           Conread name:
           Ss1.1-Ova1-OVRM10200E08.5
        

               Conread position:
               411-693
               

               Cow position:
               chr11:16987111-16986825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               67, 168
               

               Conread position:
               411-708
               

               Cow position:
               chr11:30157787-30157490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               117, 16
               

               Conread position:
               412-769
               

               Cow position:
               chr11:3254162-3253809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               69, 41
               

               Conread position:
               476-796
               

               Cow position:
               chr11:13581788-13581466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               52, 81
               

               Conread position:
               477-851
               

               Cow position:
               chr11:9269207-9269587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               47, 66
               

               Conread position:
               487-796
               

               Cow position:
               chr11:35228795-35228509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               504-799
               

               Cow position:
               chr11:9232857-9233138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               9, 69
               
Show alignments to all cow chromosomes.