Cow genome map

Conread name: Ss1.1-Pig1-122O09.5

Conread position: 1-403
Cow position: chr1:67285968-67286338 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 1-441
Cow position: chr1:18244925-18244502 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 377, 94

Conread position: 1-441
Cow position: chr1:55324065-55323636 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 1-442
Cow position: chr1:40514031-40513611 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 2-164
Cow position: chr1:62854347-62854189 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 2-378
Cow position: chr1:11863815-11863439 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 83

Conread position: 2-402
Cow position: chr1:82919177-82918811 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 273
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 93, 0

Conread position: 2-432
Cow position: chr1:101149316-101149727 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 389, 82

Conread position: 8-441
Cow position: chr1:57567418-57567836 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 100

Conread position: 8-441
Cow position: chr1:85881220-85881628 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 11-396
Cow position: chr1:79637470-79637094 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 35

Conread position: 11-441
Cow position: chr1:93853993-93854406 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 73

Conread position: 11-441
Cow position: chr1:97227236-97226816 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 73

Conread position: 14-441
Cow position: chr1:67902962-67902536 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 284
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 150, 84

Conread position: 15-312
Cow position: chr1:37455191-37455470 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 200
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 114, 69

Conread position: 15-329
Cow position: chr1:94659353-94659651 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 15-342
Cow position: chr1:72079958-72080265 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 230
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 69, 0

Conread position: 15-393
Cow position: chr1:57656002-57656396 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 318

Conread position: 15-393
Cow position: chr1:58223744-58224133 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 272
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 69, 293

Conread position: 15-402
Cow position: chr1:79336318-79335956 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 55

Conread position: 15-433
Cow position: chr1:52173028-52172592 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 336

Conread position: 15-433
Cow position: chr1:56194455-56194053 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-439
Cow position: chr1:67835681-67835254 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 284
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 78, 163

Conread position: 15-441
Cow position: chr1:3386530-3386121 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position: chr1:8824542-8824945 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position: chr1:17942349-17941925 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 38

Conread position: 15-441
Cow position: chr1:25549540-25549949 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 15-441
Cow position: chr1:33550398-33550808 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 70

Conread position: 15-441
Cow position: chr1:34688829-34689225 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 286
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 80, 0

Conread position: 15-441
Cow position: chr1:42735933-42736343 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 69

Conread position: 15-441
Cow position: chr1:55775634-55776040 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position: chr1:57367656-57367246 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 69

Conread position: 15-441
Cow position: chr1:58335312-58335722 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 69

Conread position: 15-441
Cow position: chr1:62245174-62244762 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 69

Conread position: 15-441
Cow position: chr1:62806327-62805920 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 15-441
Cow position: chr1:63606307-63605896 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 397, 71

Conread position: 15-441
Cow position: chr1:72980758-72981153 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position: chr1:76753173-76752767 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position: chr1:86699744-86699332 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 69

Conread position: 15-441
Cow position: chr1:88130237-88130644 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 15-441
Cow position: chr1:91898452-91898884 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 183

Conread position: 15-441
Cow position: chr1:100597906-100597496 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 382, 69

Conread position: 15-441
Cow position: chr1:102435552-102435141 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 69

Conread position: 15-447
Cow position: chr1:49974711-49974299 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 53

Conread position: 17-441
Cow position: chr1:87244286-87244679 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 18-327
Cow position: chr1:56722578-56722904 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 228
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 70, 0

Conread position: 18-388
Cow position: chr1:13449637-13450024 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 18-394
Cow position: chr1:8027696-8027303 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 390

Conread position: 18-441
Cow position: chr1:11292658-11292218 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 18-441
Cow position: chr1:17013282-17012850 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 18-441
Cow position: chr1:17037106-17036672 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 295
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 80, 284

Conread position: 18-441
Cow position: chr1:21086855-21087299 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 299
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 77, 155

Conread position: 18-441
Cow position: chr1:22000473-22000070 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 66

Conread position: 18-441
Cow position: chr1:25180552-25180145 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 18-441
Cow position: chr1:39543217-39543657 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 18-441
Cow position: chr1:61308457-61308888 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 133

Conread position: 18-441
Cow position: chr1:71563121-71562692 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 266

Conread position: 18-441
Cow position: chr1:80359719-80359283 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 295

Conread position: 18-441
Cow position: chr1:85791146-85791575 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 154

Conread position: 18-451
Cow position: chr1:86548676-86548238 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 303
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 66, 292

Conread position: 19-395
Cow position: chr1:37420494-37420134 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 16

Conread position: 19-432
Cow position: chr1:18880937-18880501 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 289
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 68, 161

Conread position: 19-436
Cow position: chr1:72119640-72120033 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 282
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 149, 63

Conread position: 19-441
Cow position: chr1:20828358-20828775 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 278
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 103, 65

Conread position: 19-441
Cow position: chr1:30023743-30023305 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 168

Conread position: 19-441
Cow position: chr1:31395878-31396299 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 280

Conread position: 19-441
Cow position: chr1:43019576-43020011 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 281

Conread position: 19-441
Cow position: chr1:55277032-55276600 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 288

Conread position: 19-441
Cow position: chr1:62925079-62925499 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 65

Conread position: 19-441
Cow position: chr1:69402473-69402878 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 65

Conread position: 19-441
Cow position: chr1:69922983-69922577 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 65

Conread position: 19-441
Cow position: chr1:79921280-79920841 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 19-441
Cow position: chr1:82563962-82564390 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 145

Conread position: 19-441
Cow position: chr1:89425038-89425473 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 424

Conread position: 20-441
Cow position: chr1:59210686-59210251 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 424

Conread position: 24-441
Cow position: chr1:40685233-40684804 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 289
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 64, 308

Conread position: 28-395
Cow position: chr1:73071528-73071178 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 35-272
Cow position: chr1:40907616-40907845 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 38-441
Cow position: chr1:31366595-31366191 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 0

Conread position: 40-435
Cow position: chr1:89740728-89740365 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 58

Conread position: 79-315
Cow position: chr1:3934637-3934393 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 17, 0

Conread position: 88-440
Cow position: chr1:82652177-82652522 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 0

Conread position: 88-441
Cow position: chr1:56162864-56163212 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 233
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 201, 0

Conread position: 89-441
Cow position: chr1:28872611-28872963 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 97-326
Cow position: chr1:9382702-9382475 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 154
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 46, 113

Conread position: 97-440
Cow position: chr1:77163323-77163664 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 217
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 216, 168

Conread position: 98-367
Cow position: chr1:30284049-30283791 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 21

Conread position: 98-368
Cow position: chr1:97560262-97560530 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 39, 0

Conread position: 98-396
Cow position: chr1:99995550-99995252 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 120, 111

Conread position: 98-429
Cow position: chr1:88759109-88759441 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 98-441
Cow position: chr1:6708547-6708208 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 229
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 108, 0

Conread position: 98-441
Cow position: chr1:8553871-8554214 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 74, 66

Conread position: 98-441
Cow position: chr1:33850803-33851165 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 243
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 115, 39

Conread position: 98-441
Cow position: chr1:53198335-53198679 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 0

Conread position: 98-441
Cow position: chr1:56489390-56489725 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 229
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 192, 0

Conread position: 98-441
Cow position: chr1:87449496-87449839 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 73

Conread position: 98-441
Cow position: chr1:91719095-91718748 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 99-441
Cow position: chr1:40052903-40053241 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 208, 0

Conread position: 100-447
Cow position: chr1:18014647-18014298 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 224
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 11, 293

Conread position: 102-438
Cow position: chr1:29950751-29950424 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 224
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 18, 39

Conread position: 103-441
Cow position: chr1:1461778-1461441 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 58

Conread position: 103-441
Cow position: chr1:76545991-76545657 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 103-441
Cow position: chr1:76623397-76623062 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 0

Conread position: 104-324
Cow position: chr1:102548753-102548973 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 7

Conread position: 104-441
Cow position: chr1:5501527-5501861 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 104-441
Cow position: chr1:13253882-13253552 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 0

Conread position: 104-441
Cow position: chr1:72187323-72186987 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 285

Conread position: 107-441
Cow position: chr1:79457415-79457081 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 107-441
Cow position: chr1:85781228-85780892 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 0

Conread position: 113-436
Cow position: chr1:59933102-59933434 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 224
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 10, 29

Conread position: 118-435
Cow position: chr1:20988332-20988640 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 212
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 243, 173

Conread position: 118-441
Cow position: chr1:13645286-13645617 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 235
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 22, 62

Conread position: 119-432
Cow position: chr1:76703803-76703484 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 229
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 24, 30

Conread position: 119-441
Cow position: chr1:38414384-38414688 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 122-397
Cow position: chr1:30058119-30058391 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 31, 104

Conread position: 122-401
Cow position: chr1:58180185-58179920 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 189
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 88, 42

Conread position: 122-402
Cow position: chr1:63501027-63501308 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 37, 195

Conread position: 122-430
Cow position: chr1:32342474-32342168 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 200
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 150, 77

Conread position: 125-400
Cow position: chr1:42176809-42176551 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 75, 61

Conread position: 125-404
Cow position: chr1:86608774-86609050 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 69, 184

Conread position: 128-400
Cow position: chr1:98661716-98661446 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 185
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 37

Conread position: 128-441
Cow position: chr1:30027951-30027657 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 29, 0

Conread position: 131-402
Cow position: chr1:42289977-42290240 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 24, 122

Conread position: 131-441
Cow position: chr1:18406621-18406304 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 218
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 181, 41

Conread position: 131-441
Cow position: chr1:40953284-40953596 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 221
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 27, 226

Conread position: 131-441
Cow position: chr1:89810053-89809735 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 223
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 38, 282

Conread position: 142-434
Cow position: chr1:102555683-102555965 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 15, 0

Conread position: 142-441
Cow position: chr1:68607961-68607662 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 151-435
Cow position: chr1:8330420-8330143 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 145, 0

Conread position: 159-441
Cow position: chr1:89771072-89770797 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 153, 44

Conread position: 161-433
Cow position: chr1:5318374-5318638 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 181
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 120, 0

Conread position: 162-441
Cow position: chr1:88634988-88635257 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 171-441
Cow position: chr1:69766088-69766350 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 119, 0

Conread position: 172-434
Cow position: chr1:69536519-69536783 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 15, 226

Conread position: 176-432
Cow position: chr1:62854206-62853950 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 219

Conread position: 176-436
Cow position: chr1:72656604-72656862 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 140, 0

Conread position: 176-439
Cow position: chr1:33711682-33711947 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 5

Conread position: 176-441
Cow position: chr1:28801805-28801538 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 0

Conread position: 188-432
Cow position: chr1:25887498-25887264 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 153, 46

Conread position: 188-441
Cow position: chr1:89900068-89899816 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 0

Conread position: 188-441
Cow position: chr1:97123466-97123718 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 0

Conread position: 188-441
Cow position: chr1:101858347-101858098 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 192
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 206, 169

Conread position: 189-448
Cow position: chr1:52918973-52918726 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 174
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 239, 102

Conread position: 193-436
Cow position: chr1:52233460-52233230 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 193-441
Cow position: chr1:59674127-59674375 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 120, 114

Conread position: 194-441
Cow position: chr1:28722431-28722678 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 203-441
Cow position: chr1:87207775-87207531 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 79, 212

Conread position: 206-441
Cow position: chr1:54366161-54365935 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 80

Conread position: 214-441
Cow position: chr1:33895337-33895565 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 92, 0

Conread position: 233-441
Cow position: chr1:56144652-56144445 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 189, 0

Conread position: 255-441
Cow position: chr1:40307771-40307950 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 262-441
Cow position: chr1:29361715-29361894 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 268-441
Cow position: chr1:99349307-99349132 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 11, 0

Show alignments to all cow chromosomes.